RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 PSENENQ9NZ42 101 aa5.96□□□□□ -1.46
USP28-215ENST00000545608 DNAH11Q96DT5 4516 aa5.95□□□□□ -1.46
USP28-215ENST00000545608 PLAC8L1A1L4L8 177 aa5.95□□□□□ -1.46
USP28-215ENST00000545608 LYRM9A8MSI8 78 aa5.95□□□□□ -1.46
USP28-215ENST00000545608 NPIPB6E9PJ23 425 aa5.95□□□□□ -1.46
USP28-215ENST00000545608 HYPMO75409 117 aa5.95□□□□□ -1.46
USP28-215ENST00000545608 INSP01308 110 aa5.95□□□□□ -1.46
USP28-215ENST00000545608 OR5G3P0C626 314 aa5.95□□□□□ -1.46
USP28-215ENST00000545608 DEFB130BP0DP73 79 aa5.95□□□□□ -1.46
USP28-215ENST00000545608 DEFB130AP0DP74 79 aa5.95□□□□□ -1.46
USP28-215ENST00000545608 ANXA7P20073 488 aaKnown RBP5.95□□□□□ -1.46
USP28-215ENST00000545608 S100A7P31151 101 aa5.95□□□□□ -1.46
USP28-215ENST00000545608 PLP1P60201 277 aa5.95□□□□□ -1.46
USP28-215ENST00000545608 RAB4BP61018 213 aa5.95□□□□□ -1.46
USP28-215ENST00000545608 RAB2AP61019 212 aa5.95□□□□□ -1.46
USP28-215ENST00000545608 C1orf134Q5TEV5 83 aa5.95□□□□□ -1.46
USP28-215ENST00000545608 PATE2Q6UY27 113 aa5.95□□□□□ -1.46
USP28-215ENST00000545608 ZNF575Q86XF7 245 aa5.95□□□□□ -1.46
USP28-215ENST00000545608 Q8N3U1 123 aa5.95□□□□□ -1.46
USP28-215ENST00000545608 ZNF738Q8NE65 137 aa5.95□□□□□ -1.46
USP28-215ENST00000545608 OR8A1Q8NGG7 326 aa5.95□□□□□ -1.46
USP28-215ENST00000545608 SAT2Q96F10 170 aaPredicted RBP5.95□□□□□ -1.46
USP28-215ENST00000545608 UHRF2Q96PU4 802 aa5.95□□□□□ -1.46
USP28-215ENST00000545608 TREM1Q9NP99 234 aa5.95□□□□□ -1.46
USP28-215ENST00000545608 FLVCR2Q9UPI3 526 aa5.95□□□□□ -1.46
USP28-215ENST00000545608 HIGD1AQ9Y241 93 aa5.95□□□□□ -1.46
USP28-215ENST00000545608 MRPS12O15235 138 aaKnown RBP5.94□□□□□ -1.46
USP28-215ENST00000545608 SSSCA1O60232 199 aa5.94□□□□□ -1.46
USP28-215ENST00000545608 MT-ND4LP03901 98 aa5.94□□□□□ -1.46
USP28-215ENST00000545608 METTL15P1P0C7V9 234 aa5.94□□□□□ -1.46
USP28-215ENST00000545608 LINC00869P0C866 280 aa5.94□□□□□ -1.46
USP28-215ENST00000545608 PET100P0DJ07 73 aa5.94□□□□□ -1.46
USP28-215ENST00000545608 RPL7P18124 248 aaKnown RBP5.94□□□□□ -1.46
USP28-215ENST00000545608 BTF3P20290 206 aaKnown RBP5.94□□□□□ -1.46
USP28-215ENST00000545608 TSPOP30536 169 aa5.94□□□□□ -1.46
USP28-215ENST00000545608 UBE2MP61081 183 aaKnown RBP5.94□□□□□ -1.46
USP28-215ENST00000545608 RHOBP62745 196 aa5.94□□□□□ -1.46
USP28-215ENST00000545608 DLK1P80370 383 aa5.94□□□□□ -1.46
USP28-215ENST00000545608 HIST1H1AQ02539 215 aaPredicted RBP5.94□□□□□ -1.46
USP28-215ENST00000545608 PSG3Q16557 428 aa5.94□□□□□ -1.46
USP28-215ENST00000545608 ATRAIDQ6UW56 229 aa5.94□□□□□ -1.46
USP28-215ENST00000545608 TMEM14EPQ6UXP3 125 aa5.94□□□□□ -1.46
USP28-215ENST00000545608 C15orf53Q8NAA6 179 aa5.94□□□□□ -1.46
USP28-215ENST00000545608 SMIM8Q96KF7 97 aa5.94□□□□□ -1.46
USP28-215ENST00000545608 LINC01587Q99440 93 aa5.94□□□□□ -1.46
USP28-215ENST00000545608 NIT2Q9NQR4 276 aa5.94□□□□□ -1.46
USP28-215ENST00000545608 GSN-AS1Q9NRJ2 163 aa5.94□□□□□ -1.46
USP28-215ENST00000545608 TNFSF18Q9UNG2 199 aa5.94□□□□□ -1.46
USP28-215ENST00000545608 DYNC1H1Q14204 4646 aaKnown RBP5.94□□□□□ -1.46
USP28-215ENST00000545608 A0A087X0K7 114 aa5.93□□□□□ -1.46
USP28-215ENST00000545608 F5H768 121 aa5.93□□□□□ -1.46
USP28-215ENST00000545608 EIF3GO75821 320 aaKnown RBP eCLIP5.93□□□□□ -1.46
USP28-215ENST00000545608 NUDT3O95989 172 aa5.93□□□□□ -1.46
USP28-215ENST00000545608 SNRPCP09234 159 aaKnown RBP5.93□□□□□ -1.46
USP28-215ENST00000545608 OR4E1P0C645 316 aa5.93□□□□□ -1.46
USP28-215ENST00000545608 PTTG1IPP53801 180 aa5.93□□□□□ -1.46
USP28-215ENST00000545608 SELENOTP62341 195 aa5.93□□□□□ -1.46
USP28-215ENST00000545608 SLC38A11Q08AI6 406 aa5.93□□□□□ -1.46
USP28-215ENST00000545608 ARL16Q0P5N6 197 aa5.93□□□□□ -1.46
USP28-215ENST00000545608 LBHQ53QV2 105 aaPredicted RBP5.93□□□□□ -1.46
USP28-215ENST00000545608 SOHLH1Q5JUK2 328 aa5.93□□□□□ -1.46
USP28-215ENST00000545608 ATG101Q9BSB4 218 aa5.93□□□□□ -1.46
USP28-215ENST00000545608 ARV1Q9H2C2 271 aa5.93□□□□□ -1.46
USP28-215ENST00000545608 TMPRSS5Q9H3S3 457 aa5.93□□□□□ -1.46
USP28-215ENST00000545608 NPVFQ9HCQ7 196 aa5.93□□□□□ -1.46
USP28-215ENST00000545608 NACAE9PAV3 2078 aa5.92□□□□□ -1.46
USP28-215ENST00000545608 RNF222A6NCQ9 220 aa5.92□□□□□ -1.46
USP28-215ENST00000545608 CBY3A6NI87 242 aa5.92□□□□□ -1.46
USP28-215ENST00000545608 FNDC10F2Z333 226 aa5.92□□□□□ -1.46
USP28-215ENST00000545608 K7EPK0 472 aa5.92□□□□□ -1.46
USP28-215ENST00000545608 TAAR5O14804 337 aa5.92□□□□□ -1.46
USP28-215ENST00000545608 ATP5G1P05496 136 aa5.92□□□□□ -1.46
USP28-215ENST00000545608 HTN1P15515 57 aa5.92□□□□□ -1.46
USP28-215ENST00000545608 S100A2P29034 98 aa5.92□□□□□ -1.46
USP28-215ENST00000545608 ATP5G3P48201 142 aa5.92□□□□□ -1.46
USP28-215ENST00000545608 H2BFSP57053 126 aa5.92□□□□□ -1.46
USP28-215ENST00000545608 FAM3BP58499 235 aaPredicted RBP5.92□□□□□ -1.46
USP28-215ENST00000545608 TAS2R60P59551 318 aa5.92□□□□□ -1.46
USP28-215ENST00000545608 IAH1Q2TAA2 248 aaPredicted RBP5.92□□□□□ -1.46
USP28-215ENST00000545608 DNLZQ5SXM8 178 aa5.92□□□□□ -1.46
USP28-215ENST00000545608 OR10P1Q8NGE3 313 aa5.92□□□□□ -1.46
USP28-215ENST00000545608 ZNRF2Q8NHG8 242 aa5.92□□□□□ -1.46
USP28-215ENST00000545608 RXFP4Q8TDU9 374 aa5.92□□□□□ -1.46
USP28-215ENST00000545608 RPUSD4Q96CM3 377 aaKnown RBP5.92□□□□□ -1.46
USP28-215ENST00000545608 KRTAP4-5Q9BYR2 181 aa5.92□□□□□ -1.46
USP28-215ENST00000545608 UQCC1Q9NVA1 299 aa5.92□□□□□ -1.46
USP28-215ENST00000545608 PPP1R14DQ9NXH3 145 aa5.92□□□□□ -1.46
USP28-215ENST00000545608 NBDYA0A0U1RRE5 68 aa5.91□□□□□ -1.46
USP28-215ENST00000545608 C5orf52A6NGY3 159 aa5.91□□□□□ -1.46
USP28-215ENST00000545608 LINC00587B1AMM8 73 aa5.91□□□□□ -1.46
USP28-215ENST00000545608 PRAC2D3DTV9 90 aa5.91□□□□□ -1.46
USP28-215ENST00000545608 H3BTX0 84 aa5.91□□□□□ -1.46
USP28-215ENST00000545608 AGPAT2O15120 278 aa5.91□□□□□ -1.46
USP28-215ENST00000545608 GCSHP23434 173 aa5.91□□□□□ -1.46
USP28-215ENST00000545608 CDKN1BP46527 198 aa5.91□□□□□ -1.46
USP28-215ENST00000545608 TAS2R30P59541 319 aa5.91□□□□□ -1.46
USP28-215ENST00000545608 SNRPEP62304 92 aaKnown RBP5.91□□□□□ -1.46
USP28-215ENST00000545608 MORN5Q5VZ52 161 aa5.91□□□□□ -1.46
USP28-215ENST00000545608 LINC00305Q7Z4B0 112 aa5.91□□□□□ -1.46
USP28-215ENST00000545608 TMEM256Q8N2U0 113 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms