RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 PAGE4O60829 102 aa8.71□□□□□ -1.02
LTBR-214ENST00000545445 CNN1P51911 297 aaKnown RBP8.71□□□□□ -1.02
LTBR-214ENST00000545445 RAB14P61106 215 aa8.71□□□□□ -1.02
LTBR-214ENST00000545445 CCL20P78556 96 aa8.71□□□□□ -1.02
LTBR-214ENST00000545445 HIST1H1AQ02539 215 aaPredicted RBP8.71□□□□□ -1.02
LTBR-214ENST00000545445 CST9LP1Q5W188 147 aa8.71□□□□□ -1.02
LTBR-214ENST00000545445 LINC00322Q6ZN03 302 aaPredicted RBP8.71□□□□□ -1.02
LTBR-214ENST00000545445 HIST1H2BAQ96A08 127 aa8.71□□□□□ -1.02
LTBR-214ENST00000545445 LINC00477Q96M19 166 aa8.71□□□□□ -1.02
LTBR-214ENST00000545445 EPDR1Q9UM22 224 aa8.71□□□□□ -1.02
LTBR-214ENST00000545445 YTHDF2Q9Y5A9 579 aaKnown RBP8.71□□□□□ -1.02
LTBR-214ENST00000545445 RBMY1BA6NDE4 496 aaKnown RBP8.7□□□□□ -1.02
LTBR-214ENST00000545445 RBMY1EA6NEQ0 496 aaKnown RBP8.7□□□□□ -1.02
LTBR-214ENST00000545445 PRAC2D3DTV9 90 aa8.7□□□□□ -1.02
LTBR-214ENST00000545445 NPIPB6E9PJ23 425 aa8.7□□□□□ -1.02
LTBR-214ENST00000545445 F6UB75 175 aa8.7□□□□□ -1.02
LTBR-214ENST00000545445 UBE2CO00762 179 aa8.7□□□□□ -1.02
LTBR-214ENST00000545445 TCRAP04437 139 aa8.7□□□□□ -1.02
LTBR-214ENST00000545445 RBMY1DP0C7P1 496 aaKnown RBP8.7□□□□□ -1.02
LTBR-214ENST00000545445 TMEM78Q5T7P6 136 aa8.7□□□□□ -1.02
LTBR-214ENST00000545445 GDF5OSQ5U4N7 250 aa8.7□□□□□ -1.02
LTBR-214ENST00000545445 C9orf47Q6ZRZ4 202 aa8.7□□□□□ -1.02
LTBR-214ENST00000545445 CCDC28AQ8IWP9 274 aa8.7□□□□□ -1.02
LTBR-214ENST00000545445 OR4B1Q8NGF8 309 aa8.7□□□□□ -1.02
LTBR-214ENST00000545445 ODF3Q96PU9 254 aa8.7□□□□□ -1.02
LTBR-214ENST00000545445 TM2D3Q9BRN9 247 aa8.7□□□□□ -1.02
LTBR-214ENST00000545445 ATG101Q9BSB4 218 aa8.7□□□□□ -1.02
LTBR-214ENST00000545445 CSTL1Q9H114 145 aa8.7□□□□□ -1.02
LTBR-214ENST00000545445 PPP1R14DQ9NXH3 145 aa8.7□□□□□ -1.02
LTBR-214ENST00000545445 VAX2Q9UIW0 290 aa8.7□□□□□ -1.02
LTBR-214ENST00000545445 TRBV7-9A0A0J9YWB2 115 aa8.69□□□□□ -1.02
LTBR-214ENST00000545445 C11orf94C9JXX5 98 aa8.69□□□□□ -1.02
LTBR-214ENST00000545445 AMBPP02760 352 aa8.69□□□□□ -1.02
LTBR-214ENST00000545445 NMBP08949 121 aa8.69□□□□□ -1.02
LTBR-214ENST00000545445 BCL2P10415 239 aa8.69□□□□□ -1.02
LTBR-214ENST00000545445 DEFB1P60022 68 aa8.69□□□□□ -1.02
LTBR-214ENST00000545445 CYB561D1Q8N8Q1 229 aa8.69□□□□□ -1.02
LTBR-214ENST00000545445 C1QTNF4Q9BXJ3 329 aa8.69□□□□□ -1.02
LTBR-214ENST00000545445 LENEPQ9Y5L5 61 aa8.69□□□□□ -1.02
LTBR-214ENST00000545445 DNAH10Q8IVF4 4471 aa8.69□□□□□ -1.02
LTBR-214ENST00000545445 KIAA1109Q2LD37 5005 aa8.68□□□□□ -1.02
LTBR-214ENST00000545445 PEX7O00628 323 aa8.68□□□□□ -1.02
LTBR-214ENST00000545445 PDE6DO43924 150 aa8.68□□□□□ -1.02
LTBR-214ENST00000545445 NDUFS6O75380 124 aaKnown RBP8.68□□□□□ -1.02
LTBR-214ENST00000545445 ZNF705DP0CH99 300 aaPredicted RBP8.68□□□□□ -1.02
LTBR-214ENST00000545445 ZNF705BP0CI00 300 aaPredicted RBP8.68□□□□□ -1.02
LTBR-214ENST00000545445 RPL35AP18077 110 aaKnown RBP8.68□□□□□ -1.02
LTBR-214ENST00000545445 TSPOP30536 169 aa8.68□□□□□ -1.02
LTBR-214ENST00000545445 IFITM2Q01629 132 aa8.68□□□□□ -1.02
LTBR-214ENST00000545445 MEF2BQ02080 365 aaPredicted RBP8.68□□□□□ -1.02
LTBR-214ENST00000545445 GOLT1AQ6ZVE7 132 aa8.68□□□□□ -1.02
LTBR-214ENST00000545445 AGPAT4-IT1Q9H0P7 198 aa8.68□□□□□ -1.02
LTBR-214ENST00000545445 IGKV2-40A0A087WW87 121 aaPredicted RBP8.67□□□□□ -1.02
LTBR-214ENST00000545445 RBFOX3A6NFN3 312 aa8.67□□□□□ -1.02
LTBR-214ENST00000545445 IGKV2D-40P01614 121 aaPredicted RBP8.67□□□□□ -1.02
LTBR-214ENST00000545445 IGKV3-20P01619 116 aa8.67□□□□□ -1.02
LTBR-214ENST00000545445 S100A9P06702 114 aaKnown RBP8.67□□□□□ -1.02
LTBR-214ENST00000545445 LEPP41159 167 aa8.67□□□□□ -1.02
LTBR-214ENST00000545445 ATP5G3P48201 142 aa8.67□□□□□ -1.02
LTBR-214ENST00000545445 ZNF138P52744 262 aa8.67□□□□□ -1.02
LTBR-214ENST00000545445 CLLU1Q5K131 121 aa8.67□□□□□ -1.02
LTBR-214ENST00000545445 AMTNQ6UX39 209 aa8.67□□□□□ -1.02
LTBR-214ENST00000545445 Q6ZWC4 215 aa8.67□□□□□ -1.02
LTBR-214ENST00000545445 TMEM75Q8N9X5 138 aa8.67□□□□□ -1.02
LTBR-214ENST00000545445 VGLL1Q99990 258 aa8.67□□□□□ -1.02
LTBR-214ENST00000545445 ZNF492Q9P255 531 aa8.67□□□□□ -1.02
LTBR-214ENST00000545445 RPH3ALQ9UNE2 315 aa8.67□□□□□ -1.02
LTBR-214ENST00000545445 LOC102723971A0A1B0GUV8 181 aa8.66□□□□□ -1.02
LTBR-214ENST00000545445 CA1P00915 261 aaPredicted RBP8.66□□□□□ -1.02
LTBR-214ENST00000545445 CT45A10P0DMU9 189 aa8.66□□□□□ -1.02
LTBR-214ENST00000545445 CDKN1BP46527 198 aa8.66□□□□□ -1.02
LTBR-214ENST00000545445 GNG5P63218 68 aa8.66□□□□□ -1.02
LTBR-214ENST00000545445 ERCC8Q13216 396 aa8.66□□□□□ -1.02
LTBR-214ENST00000545445 HAGHQ16775 308 aa8.66□□□□□ -1.02
LTBR-214ENST00000545445 ZNF506Q5JVG8 444 aa8.66□□□□□ -1.02
LTBR-214ENST00000545445 C11orf52Q96A22 123 aa8.66□□□□□ -1.02
LTBR-214ENST00000545445 FAM210AQ96ND0 272 aa8.66□□□□□ -1.02
LTBR-214ENST00000545445 TRBV6-1A0A0K0K1D8 114 aa8.65□□□□□ -1.02
LTBR-214ENST00000545445 RGS13O14921 159 aa8.65□□□□□ -1.02
LTBR-214ENST00000545445 CRISP2P16562 243 aa8.65□□□□□ -1.02
LTBR-214ENST00000545445 AKR1C3P42330 323 aa8.65□□□□□ -1.02
LTBR-214ENST00000545445 FLI1Q01543 452 aaPredicted RBP8.65□□□□□ -1.02
LTBR-214ENST00000545445 SAPCD1Q5SSQ6 148 aa8.65□□□□□ -1.02
LTBR-214ENST00000545445 FMC1Q96HJ9 113 aa8.65□□□□□ -1.02
LTBR-214ENST00000545445 FAM19A4Q96LR4 140 aa8.65□□□□□ -1.02
LTBR-214ENST00000545445 NDFIP1Q9BT67 221 aa8.65□□□□□ -1.02
LTBR-214ENST00000545445 EIF5A2Q9GZV4 153 aaKnown RBP8.65□□□□□ -1.02
LTBR-214ENST00000545445 SMDT1Q9H4I9 107 aa8.65□□□□□ -1.02
LTBR-214ENST00000545445 TP53TG1Q9Y2A0 90 aa8.65□□□□□ -1.02
LTBR-214ENST00000545445 KLF12Q9Y4X4 402 aa8.65□□□□□ -1.02
LTBR-214ENST00000545445 TMEM250H0YL14 139 aa8.64□□□□□ -1.03
LTBR-214ENST00000545445 GIG44P09565 113 aaPredicted RBP8.64□□□□□ -1.03
LTBR-214ENST00000545445 UBE2G1P62253 170 aa8.64□□□□□ -1.03
LTBR-214ENST00000545445 TMEM183BQ1AE95 376 aa8.64□□□□□ -1.03
LTBR-214ENST00000545445 C2CD4CQ8TF44 421 aa8.64□□□□□ -1.03
LTBR-214ENST00000545445 PCNPQ8WW12 178 aaKnown RBP8.64□□□□□ -1.03
LTBR-214ENST00000545445 IGF2BP2-AS1Q96M15 143 aa8.64□□□□□ -1.03
LTBR-214ENST00000545445 C20orf144Q9BQM9 153 aa8.64□□□□□ -1.03
LTBR-214ENST00000545445 SLC35B3Q9H1N7 401 aa8.64□□□□□ -1.03
LTBR-214ENST00000545445 PSG8Q9UQ74 426 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms