RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 ZNF767PQ75MW2 155 aa5.47□□□□□ -1.53
SNHG1-223ENST00000545440 BAP18Q8IXM2 172 aa5.47□□□□□ -1.53
SNHG1-223ENST00000545440 TMEM256Q8N2U0 113 aa5.47□□□□□ -1.53
SNHG1-223ENST00000545440 RPP25LQ8N5L8 163 aaKnown RBP5.47□□□□□ -1.53
SNHG1-223ENST00000545440 MPLKIPQ8TAP9 179 aa5.47□□□□□ -1.53
SNHG1-223ENST00000545440 RPUSD4Q96CM3 377 aaKnown RBP5.47□□□□□ -1.53
SNHG1-223ENST00000545440 NIPSNAP3BQ9BS92 247 aa5.47□□□□□ -1.53
SNHG1-223ENST00000545440 TMEM208Q9BTX3 173 aa5.47□□□□□ -1.53
SNHG1-223ENST00000545440 NPCDR1Q9BY65 106 aa5.47□□□□□ -1.53
SNHG1-223ENST00000545440 SLC25A31Q9H0C2 315 aa5.47□□□□□ -1.53
SNHG1-223ENST00000545440 AAMDCQ9H7C9 122 aa5.47□□□□□ -1.53
SNHG1-223ENST00000545440 DNAJC4Q9NNZ3 241 aa5.47□□□□□ -1.53
SNHG1-223ENST00000545440 BATF3Q9NR55 127 aa5.47□□□□□ -1.53
SNHG1-223ENST00000545440 KCNIP2Q9NS61 270 aa5.47□□□□□ -1.53
SNHG1-223ENST00000545440 YTHDF2Q9Y5A9 579 aaKnown RBP5.47□□□□□ -1.53
SNHG1-223ENST00000545440 RLN2P04090 185 aa5.46□□□□□ -1.54
SNHG1-223ENST00000545440 PET100P0DJ07 73 aa5.46□□□□□ -1.54
SNHG1-223ENST00000545440 TSPOP30536 169 aa5.46□□□□□ -1.54
SNHG1-223ENST00000545440 CDKN1BP46527 198 aa5.46□□□□□ -1.54
SNHG1-223ENST00000545440 H2BFSP57053 126 aa5.46□□□□□ -1.54
SNHG1-223ENST00000545440 KRTAP15-1Q3LI76 137 aa5.46□□□□□ -1.54
SNHG1-223ENST00000545440 LRRC37A5PQ49AS3 106 aa5.46□□□□□ -1.54
SNHG1-223ENST00000545440 OR5C1Q8NGR4 320 aa5.46□□□□□ -1.54
SNHG1-223ENST00000545440 SAT2Q96F10 170 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-223ENST00000545440 FAM210BQ96KR6 192 aa5.46□□□□□ -1.54
SNHG1-223ENST00000545440 NDUFAF3Q9BU61 184 aa5.46□□□□□ -1.54
SNHG1-223ENST00000545440 OR5AC2Q9NZP5 309 aa5.46□□□□□ -1.54
SNHG1-223ENST00000545440 TMEM14CQ9P0S9 112 aa5.46□□□□□ -1.54
SNHG1-223ENST00000545440 EPPK1P58107 5090 aaKnown RBP5.45□□□□□ -1.54
SNHG1-223ENST00000545440 TRAV12-2A0A075B6T6 113 aa5.45□□□□□ -1.54
SNHG1-223ENST00000545440 GAGE12JA6NER3 117 aa5.45□□□□□ -1.54
SNHG1-223ENST00000545440 LYRM9A8MSI8 78 aa5.45□□□□□ -1.54
SNHG1-223ENST00000545440 H3BQ15 152 aa5.45□□□□□ -1.54
SNHG1-223ENST00000545440 SIX6O95475 246 aa5.45□□□□□ -1.54
SNHG1-223ENST00000545440 TAS2R60P59551 318 aa5.45□□□□□ -1.54
SNHG1-223ENST00000545440 RHOBP62745 196 aa5.45□□□□□ -1.54
SNHG1-223ENST00000545440 PDE6HQ13956 83 aa5.45□□□□□ -1.54
SNHG1-223ENST00000545440 LCE1DQ5T752 114 aa5.45□□□□□ -1.54
SNHG1-223ENST00000545440 OR10J6PQ8NGY7 276 aa5.45□□□□□ -1.54
SNHG1-223ENST00000545440 THAP6Q8TBB0 222 aa5.45□□□□□ -1.54
SNHG1-223ENST00000545440 PPP1R1CQ8WVI7 109 aa5.45□□□□□ -1.54
SNHG1-223ENST00000545440 MRPL53Q96EL3 112 aaKnown RBP5.45□□□□□ -1.54
SNHG1-223ENST00000545440 ODF3Q96PU9 254 aa5.45□□□□□ -1.54
SNHG1-223ENST00000545440 C20orf144Q9BQM9 153 aa5.45□□□□□ -1.54
SNHG1-223ENST00000545440 KRTAP9-3Q9BYQ3 159 aa5.45□□□□□ -1.54
SNHG1-223ENST00000545440 FRAS1Q86XX4 4008 aa5.45□□□□□ -1.54
SNHG1-223ENST00000545440 DNAH6Q9C0G6 4158 aa5.45□□□□□ -1.54
SNHG1-223ENST00000545440 TRBV19A0A075B6N1 114 aa5.44□□□□□ -1.54
SNHG1-223ENST00000545440 TRAV5A0A0B4J249 113 aa5.44□□□□□ -1.54
SNHG1-223ENST00000545440 PLAC8L1A1L4L8 177 aa5.44□□□□□ -1.54
SNHG1-223ENST00000545440 H3BTX0 84 aa5.44□□□□□ -1.54
SNHG1-223ENST00000545440 SSNA1O43805 119 aa5.44□□□□□ -1.54
SNHG1-223ENST00000545440 SNRPCP09234 159 aaKnown RBP5.44□□□□□ -1.54
SNHG1-223ENST00000545440 P0DMU3 169 aa5.44□□□□□ -1.54
SNHG1-223ENST00000545440 FAM231AP0DMU4 169 aa5.44□□□□□ -1.54
SNHG1-223ENST00000545440 FAM231CP0DMU5 169 aa5.44□□□□□ -1.54
SNHG1-223ENST00000545440 CLINT1Q14677 625 aa5.44□□□□□ -1.54
SNHG1-223ENST00000545440 SERTAD4-AS1Q5TG53 156 aa5.44□□□□□ -1.54
SNHG1-223ENST00000545440 TMEM263Q8WUH6 116 aaKnown RBP5.44□□□□□ -1.54
SNHG1-223ENST00000545440 C16orf74Q96GX8 76 aa5.44□□□□□ -1.54
SNHG1-223ENST00000545440 MUC4Q99102 2169 aa5.44□□□□□ -1.54
SNHG1-223ENST00000545440 MRPL32Q9BYC8 188 aaKnown RBP5.44□□□□□ -1.54
SNHG1-223ENST00000545440 WDR61Q9GZS3 305 aaKnown RBP5.44□□□□□ -1.54
SNHG1-223ENST00000545440 ZNF586Q9NXT0 402 aa5.44□□□□□ -1.54
SNHG1-223ENST00000545440 ZNF705GA8MUZ8 300 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-223ENST00000545440 PRAC2D3DTV9 90 aa5.43□□□□□ -1.54
SNHG1-223ENST00000545440 C17orf112F2Z3M2 114 aa5.43□□□□□ -1.54
SNHG1-223ENST00000545440 H7BYZ3 331 aa5.43□□□□□ -1.54
SNHG1-223ENST00000545440 MPC2O95563 127 aa5.43□□□□□ -1.54
SNHG1-223ENST00000545440 HIST1H1EP10412 219 aaKnown RBP5.43□□□□□ -1.54
SNHG1-223ENST00000545440 DAD1P61803 113 aa5.43□□□□□ -1.54
SNHG1-223ENST00000545440 GCSAMLQ5JQS6 135 aa5.43□□□□□ -1.54
SNHG1-223ENST00000545440 PIK3CD-AS1Q5SR53 167 aa5.43□□□□□ -1.54
SNHG1-223ENST00000545440 GFI1BQ5VTD9 330 aa5.43□□□□□ -1.54
SNHG1-223ENST00000545440 ZNF493Q6ZR52 646 aa5.43□□□□□ -1.54
SNHG1-223ENST00000545440 RNASE8Q8TDE3 154 aaKnown RBP5.43□□□□□ -1.54
SNHG1-223ENST00000545440 LINC01587Q99440 93 aa5.43□□□□□ -1.54
SNHG1-223ENST00000545440 ATP5SQ99766 215 aa5.43□□□□□ -1.54
SNHG1-223ENST00000545440 SLC25A2Q9BXI2 301 aa5.43□□□□□ -1.54
SNHG1-223ENST00000545440 PRELID1Q9Y255 219 aa5.43□□□□□ -1.54
SNHG1-223ENST00000545440 HSPB11Q9Y547 144 aa5.43□□□□□ -1.54
SNHG1-223ENST00000545440 NDUFB4O95168 129 aa5.42□□□□□ -1.54
SNHG1-223ENST00000545440 PTTG1O95997 202 aa5.42□□□□□ -1.54
SNHG1-223ENST00000545440 PYYP10082 97 aa5.42□□□□□ -1.54
SNHG1-223ENST00000545440 LEPP41159 167 aa5.42□□□□□ -1.54
SNHG1-223ENST00000545440 POM121L12Q8N7R1 296 aa5.42□□□□□ -1.54
SNHG1-223ENST00000545440 FAM167A-AS1Q96KT0 104 aa5.42□□□□□ -1.54
SNHG1-223ENST00000545440 MBD2Q9UBB5 411 aa5.42□□□□□ -1.54
SNHG1-223ENST00000545440 VPS13DQ5THJ4 4388 aa5.42□□□□□ -1.54
SNHG1-223ENST00000545440 BIRC6Q9NR09 4857 aa5.41□□□□□ -1.54
SNHG1-223ENST00000545440 KRTAP4-8A0A0G2JLE6 195 aa5.41□□□□□ -1.54
SNHG1-223ENST00000545440 KLLNB2CW77 178 aa5.41□□□□□ -1.54
SNHG1-223ENST00000545440 M0R3E3 92 aa5.41□□□□□ -1.54
SNHG1-223ENST00000545440 SCGB1D1O95968 90 aa5.41□□□□□ -1.54
SNHG1-223ENST00000545440 PRM2P04554 102 aa5.41□□□□□ -1.54
SNHG1-223ENST00000545440 SLC25A5P05141 298 aaKnown RBP5.41□□□□□ -1.54
SNHG1-223ENST00000545440 CT45A10P0DMU9 189 aa5.41□□□□□ -1.54
SNHG1-223ENST00000545440 PRB4P10163 310 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-223ENST00000545440 HTN3P15516 51 aa5.41□□□□□ -1.54
SNHG1-223ENST00000545440 AZU1P20160 251 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms