RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 OR5D14Q8NGL3 314 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 Q8TAT8 98 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 BRK1Q8WUW1 75 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 THEM6Q8WUY1 208 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 SFT2D1Q8WV19 159 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 RAB37Q96AX2 223 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 YPEL2Q96QA6 119 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 TMEM70Q9BUB7 260 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 DDA1Q9BW61 102 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 RNF122Q9H9V4 155 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 LRTM1Q9HBL6 345 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 MED9Q9NWA0 146 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 FKBP11Q9NYL4 201 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 GINS2Q9Y248 185 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 HS3ST2Q9Y278 367 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 U3KQ87 197 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 FBN2P35556 2912 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 ACACBO00763 2458 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 CFTRP13569 1480 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 FANCD2Q9BXW9 1451 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 ABCA8O94911 1581 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 SPG11Q96JI7 2443 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 PLXNA2O75051 1894 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 BIRC6Q9NR09 4857 aa0.65□□□□□ -2.31
CCDC170-203ENST00000544131 MYO18BQ8IUG5 2567 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 TMEM131LA2VDJ0 1609 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 KIF14Q15058 1648 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 KIAA1549LQ6ZVL6 1849 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 ROS1P08922 2347 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 NCOR1O75376 2440 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 A0A087WX48 190 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 TRAV12-1A0A0B4J245 112 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 C9orf170A2RU37 121 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 PRORSD1PA6NEY8 169 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 OR2T8A6NH00 312 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 C5orf67F2Z3F1 127 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 H3BQV1 296 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 C19orf84I3L1E1 186 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 HIST1H2BKO60814 126 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 KLF7O75840 302 aaPredicted RBP0.64□□□□□ -2.31
CCDC170-203ENST00000544131 PROSCO94903 275 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 DNAL4O96015 105 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 HIST1H2BJP06899 126 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 NBEAP1P0C6P0 100 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 BAALC-AS2P0C853 105 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 BCL2P10415 239 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 RNASE3P12724 160 aaKnown RBP0.64□□□□□ -2.31
CCDC170-203ENST00000544131 MIFP14174 115 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 SDC4P31431 198 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 SDC2P34741 201 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 RAB5CP51148 216 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 POLR2HP52434 150 aaKnown RBP0.64□□□□□ -2.31
CCDC170-203ENST00000544131 MYL5Q02045 173 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 C10orf55Q5SWW7 151 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 PRR15Q8IV56 129 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 OR5D16Q8NGK9 328 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 OR5H6Q8NGV6 325 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 BATF3Q9NR55 127 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 OR5AC2Q9NZP5 309 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 MED31Q9Y3C7 131 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 NUBP2Q9Y5Y2 271 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 CAMSAP2Q08AD1 1489 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 MAGI1Q96QZ7 1491 aaPredicted RBP0.64□□□□□ -2.31
CCDC170-203ENST00000544131 RAPGEF2Q9Y4G8 1499 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 TNRC6CQ9HCJ0 1690 aaKnown RBP0.64□□□□□ -2.31
CCDC170-203ENST00000544131 SETD2Q9BYW2 2564 aaPredicted RBP0.64□□□□□ -2.31
CCDC170-203ENST00000544131 PCNTO95613 3336 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 SPEF2Q9C093 1822 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 MAGI3Q5TCQ9 1506 aa0.64□□□□□ -2.31
CCDC170-203ENST00000544131 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.64□□□□□ -2.31
CCDC170-203ENST00000544131 PRG4Q92954 1404 aaPredicted RBP0.64□□□□□ -2.31
CCDC170-203ENST00000544131 A0A0C4DFX4 3053 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 GCN1Q92616 2671 aaKnown RBP0.63□□□□□ -2.31
CCDC170-203ENST00000544131 SPTBN4Q9H254 2564 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 CCDC168Q8NDH2 2452 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 FAM186AA6NE01 2351 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 ANKHD1Q8IWZ3 2542 aaKnown RBP0.63□□□□□ -2.31
CCDC170-203ENST00000544131 A2MP01023 1474 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 GVINP1Q7Z2Y8 2422 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 MED13LQ71F56 2210 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 TRAV10A0A0B4J240 114 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 LOC107984156A0A0G2JMH3 177 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 A0A1B0GW64 132 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 TCRBV4S1A1TA0A5B7 111 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 FUOMA2VDF0 154 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 A8MWV9 139 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 E7EQ34 232 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 KPNA4O00629 521 aaPredicted RBP0.63□□□□□ -2.31
CCDC170-203ENST00000544131 MT-ND4LP03901 98 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 PRB4P10163 310 aaPredicted RBP0.63□□□□□ -2.31
CCDC170-203ENST00000544131 RPL35P42766 123 aaKnown RBP0.63□□□□□ -2.31
CCDC170-203ENST00000544131 CDK6Q00534 326 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 PLCXD2Q0VAA5 305 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 OR8B8Q15620 311 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 LINC00305Q7Z4B0 112 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 GKN2Q86XP6 184 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 ARL17AQ8IVW1 177 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 FAM216BQ8N7L0 139 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 NUP35Q8NFH5 326 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 TMEM254Q8TBM7 123 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms