RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 IGFL4Q6B9Z1 124 aa9.95□□□□□ -0.82
SMG8-202ENST00000543872 TEX29Q8N6K0 151 aa9.95□□□□□ -0.82
SMG8-202ENST00000543872 KIR2DL4Q99706 377 aa9.95□□□□□ -0.82
SMG8-202ENST00000543872 ZNF71Q9NQZ8 489 aaPredicted RBP9.95□□□□□ -0.82
SMG8-202ENST00000543872 CACNA1BQ00975 2339 aa9.95□□□□□ -0.82
SMG8-202ENST00000543872 LINC01548A6NM66 108 aa9.95□□□□□ -0.82
SMG8-202ENST00000543872 INS-IGF2F8WCM5 200 aa9.95□□□□□ -0.82
SMG8-202ENST00000543872 H3BVH4 76 aa9.95□□□□□ -0.82
SMG8-202ENST00000543872 IL4P05112 153 aa9.95□□□□□ -0.82
SMG8-202ENST00000543872 KLK15Q9H2R5 256 aa9.95□□□□□ -0.82
SMG8-202ENST00000543872 ZMAT4Q9H898 229 aa9.95□□□□□ -0.82
SMG8-202ENST00000543872 HOXB4P17483 251 aaPredicted RBP9.94□□□□□ -0.82
SMG8-202ENST00000543872 SMCPP49901 116 aaPredicted RBP9.94□□□□□ -0.82
SMG8-202ENST00000543872 MAFAQ8NHW3 353 aaPredicted RBP9.94□□□□□ -0.82
SMG8-202ENST00000543872 MYOZ3Q8TDC0 251 aa9.94□□□□□ -0.82
SMG8-202ENST00000543872 PPDPFQ9H3Y8 114 aa9.94□□□□□ -0.82
SMG8-202ENST00000543872 PCNX1Q96RV3 2341 aa9.94□□□□□ -0.82
SMG8-202ENST00000543872 NCBP2LA6PVI3 153 aaKnown RBP9.94□□□□□ -0.82
SMG8-202ENST00000543872 M0QXV9 152 aa9.94□□□□□ -0.82
SMG8-202ENST00000543872 ZFP2Q6ZN57 461 aa9.94□□□□□ -0.82
SMG8-202ENST00000543872 AAMDCQ9H7C9 122 aa9.94□□□□□ -0.82
SMG8-202ENST00000543872 LINC01549A6NIU2 74 aa9.94□□□□□ -0.82
SMG8-202ENST00000543872 MDS2Q8NDY4 140 aa9.94□□□□□ -0.82
SMG8-202ENST00000543872 TMEM14CQ9P0S9 112 aa9.94□□□□□ -0.82
SMG8-202ENST00000543872 MALRD1Q5VYJ5 2156 aa9.93□□□□□ -0.82
SMG8-202ENST00000543872 GAGE12JA6NER3 117 aa9.93□□□□□ -0.82
SMG8-202ENST00000543872 TM4SF5O14894 197 aa9.93□□□□□ -0.82
SMG8-202ENST00000543872 ATP5LO75964 103 aa9.93□□□□□ -0.82
SMG8-202ENST00000543872 GAGE7O76087 117 aa9.93□□□□□ -0.82
SMG8-202ENST00000543872 GAGE12FP0CL80 117 aa9.93□□□□□ -0.82
SMG8-202ENST00000543872 GAGE12GP0CL81 117 aa9.93□□□□□ -0.82
SMG8-202ENST00000543872 GAGE12IP0CL82 117 aa9.93□□□□□ -0.82
SMG8-202ENST00000543872 EFNA4P52798 201 aa9.93□□□□□ -0.82
SMG8-202ENST00000543872 GAGE4Q13068 117 aa9.93□□□□□ -0.82
SMG8-202ENST00000543872 PIFOQ8TCI5 191 aa9.93□□□□□ -0.82
SMG8-202ENST00000543872 PROCRQ9UNN8 238 aa9.93□□□□□ -0.82
SMG8-202ENST00000543872 PF4V1P10720 104 aa9.93□□□□□ -0.82
SMG8-202ENST00000543872 SRSF1Q07955 248 aaKnown RBP eCLIP9.93□□□□□ -0.82
SMG8-202ENST00000543872 TMEM200BQ69YZ2 307 aa9.93□□□□□ -0.82
SMG8-202ENST00000543872 ZNF576Q9H609 170 aa9.93□□□□□ -0.82
SMG8-202ENST00000543872 CNOT1A5YKK6 2376 aaKnown RBP9.93□□□□□ -0.82
SMG8-202ENST00000543872 FABP5P3A8MUU1 101 aa9.92□□□□□ -0.82
SMG8-202ENST00000543872 IGLV1-44P01699 117 aa9.92□□□□□ -0.82
SMG8-202ENST00000543872 IGKV1-17P01599 117 aa9.92□□□□□ -0.82
SMG8-202ENST00000543872 ZNF80P51504 273 aaPredicted RBP9.92□□□□□ -0.82
SMG8-202ENST00000543872 MORN3Q6PF18 240 aaPredicted RBP9.92□□□□□ -0.82
SMG8-202ENST00000543872 DLX4Q92988 240 aaPredicted RBP9.92□□□□□ -0.82
SMG8-202ENST00000543872 NXT2Q9NPJ8 142 aaKnown RBP9.92□□□□□ -0.82
SMG8-202ENST00000543872 VPREB3Q9UKI3 123 aa9.92□□□□□ -0.82
SMG8-202ENST00000543872 PLGLAQ15195 96 aa9.92□□□□□ -0.82
SMG8-202ENST00000543872 PMS2CLQ68D20 193 aa9.92□□□□□ -0.82
SMG8-202ENST00000543872 RNF185Q96GF1 192 aa9.92□□□□□ -0.82
SMG8-202ENST00000543872 SHANK2-AS3Q9BTD1 123 aa9.92□□□□□ -0.82
SMG8-202ENST00000543872 A0A087WX48 190 aa9.91□□□□□ -0.82
SMG8-202ENST00000543872 SRSF9Q13242 221 aaKnown RBP eCLIP9.91□□□□□ -0.82
SMG8-202ENST00000543872 PSMG4Q5JS54 123 aa9.91□□□□□ -0.82
SMG8-202ENST00000543872 RAX2Q96IS3 184 aa9.91□□□□□ -0.82
SMG8-202ENST00000543872 FBXL15Q9H469 300 aa9.91□□□□□ -0.82
SMG8-202ENST00000543872 SMG1Q96Q15 3661 aaKnown RBP9.91□□□□□ -0.82
SMG8-202ENST00000543872 SHISA9B4DS77 424 aa9.91□□□□□ -0.82
SMG8-202ENST00000543872 IGHV1-46P01743 117 aa9.91□□□□□ -0.82
SMG8-202ENST00000543872 HLA-DRB4P13762 266 aa9.91□□□□□ -0.82
SMG8-202ENST00000543872 CFAP126Q5VTH2 177 aa9.91□□□□□ -0.82
SMG8-202ENST00000543872 HLA-DRB4X5D2U9 266 aa9.91□□□□□ -0.82
SMG8-202ENST00000543872 TRAV26-2A0A0B4J265 109 aa9.91□□□□□ -0.82
SMG8-202ENST00000543872 TAL2Q16559 108 aa9.91□□□□□ -0.82
SMG8-202ENST00000543872 C3orf56Q8N813 242 aa9.91□□□□□ -0.82
SMG8-202ENST00000543872 SIT1Q9Y3P8 196 aa9.91□□□□□ -0.82
SMG8-202ENST00000543872 RAI1Q7Z5J4 1906 aaPredicted RBP9.9□□□□□ -0.82
SMG8-202ENST00000543872 TRBV6-1A0A0K0K1D8 114 aa9.9□□□□□ -0.82
SMG8-202ENST00000543872 MRGPRG-AS1Q2M3A8 158 aa9.9□□□□□ -0.82
SMG8-202ENST00000543872 SCGB1D4Q6XE38 83 aa9.9□□□□□ -0.82
SMG8-202ENST00000543872 TACC2O95359 2948 aa9.9□□□□□ -0.82
SMG8-202ENST00000543872 TRBV7-3A0A075B6L6 115 aa9.9□□□□□ -0.82
SMG8-202ENST00000543872 CARD19Q96LW7 228 aa9.9□□□□□ -0.82
SMG8-202ENST00000543872 BOD1L1Q8NFC6 3051 aa9.9□□□□□ -0.83
SMG8-202ENST00000543872 IGHV3OR16-8A0A075B7F1 116 aa9.9□□□□□ -0.83
SMG8-202ENST00000543872 HLA-DMBP28068 263 aa9.9□□□□□ -0.83
SMG8-202ENST00000543872 RNF125Q96EQ8 232 aa9.9□□□□□ -0.83
SMG8-202ENST00000543872 AJUBAQ96IF1 538 aa9.9□□□□□ -0.83
SMG8-202ENST00000543872 CTSZQ9UBR2 303 aa9.9□□□□□ -0.83
SMG8-202ENST00000543872 PRR25Q96S07 402 aa9.89□□□□□ -0.83
SMG8-202ENST00000543872 LINC00574Q9H8X3 128 aa9.89□□□□□ -0.83
SMG8-202ENST00000543872 SLC25A15Q9Y619 301 aa9.89□□□□□ -0.83
SMG8-202ENST00000543872 GLRXP35754 106 aa9.89□□□□□ -0.83
SMG8-202ENST00000543872 NDUFV3P56181 108 aaKnown RBP9.89□□□□□ -0.83
SMG8-202ENST00000543872 VKORC1Q9BQB6 163 aa9.89□□□□□ -0.83
SMG8-202ENST00000543872 CACNA1HO95180 2353 aa9.89□□□□□ -0.83
SMG8-202ENST00000543872 DTX2Q86UW9 622 aa9.88□□□□□ -0.83
SMG8-202ENST00000543872 C1orf210Q8IVY1 113 aa9.88□□□□□ -0.83
SMG8-202ENST00000543872 C1orf162Q8NEQ5 155 aaPredicted RBP9.88□□□□□ -0.83
SMG8-202ENST00000543872 PPDPFLQ8WWR9 84 aa9.88□□□□□ -0.83
SMG8-202ENST00000543872 MYMXA0A1B0GTQ4 84 aa9.88□□□□□ -0.83
SMG8-202ENST00000543872 H3BRN7 92 aa9.88□□□□□ -0.83
SMG8-202ENST00000543872 K7EM74 188 aa9.88□□□□□ -0.83
SMG8-202ENST00000543872 ZNF491Q8N8L2 437 aa9.88□□□□□ -0.83
SMG8-202ENST00000543872 RAB1BQ9H0U4 201 aa9.88□□□□□ -0.83
SMG8-202ENST00000543872 SIGLEC9Q9Y336 463 aa9.88□□□□□ -0.83
SMG8-202ENST00000543872 SCGB1C2P0DMR2 95 aa9.88□□□□□ -0.83
SMG8-202ENST00000543872 CCL17Q92583 94 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms