RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 UQCC1Q9NVA1 299 aa15.45■□□□□ 0.06
CDKN3-207ENST00000543789 PRELID1Q9Y255 219 aa15.45■□□□□ 0.06
CDKN3-207ENST00000543789 TNFRSF18Q9Y5U5 241 aa15.45■□□□□ 0.06
CDKN3-207ENST00000543789 MPDU1O75352 247 aa15.44■□□□□ 0.06
CDKN3-207ENST00000543789 BTCP35070 178 aa15.44■□□□□ 0.06
CDKN3-207ENST00000543789 RPL29P47914 159 aaKnown RBP15.44■□□□□ 0.06
CDKN3-207ENST00000543789 CAV2P51636 162 aa15.44■□□□□ 0.06
CDKN3-207ENST00000543789 XGP55808 180 aa15.44■□□□□ 0.06
CDKN3-207ENST00000543789 ZNF846Q147U1 533 aa15.44■□□□□ 0.06
CDKN3-207ENST00000543789 NFE4Q86UQ8 179 aa15.44■□□□□ 0.06
CDKN3-207ENST00000543789 C20orf85Q9H1P6 137 aa15.44■□□□□ 0.06
CDKN3-207ENST00000543789 SLC39A9Q9NUM3 307 aa15.44■□□□□ 0.06
CDKN3-207ENST00000543789 WDR83OSQ9Y284 106 aa15.44■□□□□ 0.06
CDKN3-207ENST00000543789 LSM5Q9Y4Y9 91 aaKnown RBP15.44■□□□□ 0.06
CDKN3-207ENST00000543789 TIMM9Q9Y5J7 89 aa15.44■□□□□ 0.06
CDKN3-207ENST00000543789 HERC1Q15751 4861 aa15.44■□□□□ 0.06
CDKN3-207ENST00000543789 IGHV3-53P01767 116 aa15.43■□□□□ 0.06
CDKN3-207ENST00000543789 GPX1P07203 203 aa15.43■□□□□ 0.06
CDKN3-207ENST00000543789 HIST1H1EP10412 219 aaKnown RBP15.43■□□□□ 0.06
CDKN3-207ENST00000543789 SLAQ13239 276 aa15.43■□□□□ 0.06
CDKN3-207ENST00000543789 CNPY1Q3B7I2 92 aa15.43■□□□□ 0.06
CDKN3-207ENST00000543789 TMEM14CQ9P0S9 112 aa15.43■□□□□ 0.06
CDKN3-207ENST00000543789 PRO0255Q9UI72 69 aa15.43■□□□□ 0.06
CDKN3-207ENST00000543789 FAM24AA6NFZ4 105 aa15.42■□□□□ 0.06
CDKN3-207ENST00000543789 CCSO14618 274 aa15.42■□□□□ 0.06
CDKN3-207ENST00000543789 NDUFB4O95168 129 aa15.42■□□□□ 0.06
CDKN3-207ENST00000543789 IBA57Q5T440 356 aaKnown RBP15.42■□□□□ 0.06
CDKN3-207ENST00000543789 LYPD5Q6UWN5 251 aa15.42■□□□□ 0.06
CDKN3-207ENST00000543789 TRAV9-2A0A087WT02 112 aa15.41■□□□□ 0.06
CDKN3-207ENST00000543789 FAM25EA8MYX2 175 aa15.41■□□□□ 0.06
CDKN3-207ENST00000543789 NMBP08949 121 aa15.41■□□□□ 0.06
CDKN3-207ENST00000543789 CRISP2P16562 243 aa15.41■□□□□ 0.06
CDKN3-207ENST00000543789 PDE6HQ13956 83 aa15.41■□□□□ 0.06
CDKN3-207ENST00000543789 MRPL23Q16540 153 aaKnown RBP15.41■□□□□ 0.06
CDKN3-207ENST00000543789 VWC2Q2TAL6 325 aa15.41■□□□□ 0.06
CDKN3-207ENST00000543789 C9orf47Q6ZRZ4 202 aa15.41■□□□□ 0.06
CDKN3-207ENST00000543789 TP53TG3Q9ULZ0 132 aa15.41■□□□□ 0.06
CDKN3-207ENST00000543789 HHLA3Q9XRX5 114 aa15.41■□□□□ 0.06
CDKN3-207ENST00000543789 RGS13O14921 159 aa15.4■□□□□ 0.06
CDKN3-207ENST00000543789 IFNA5P01569 189 aa15.4■□□□□ 0.06
CDKN3-207ENST00000543789 S100A11P31949 105 aa15.4■□□□□ 0.06
CDKN3-207ENST00000543789 CRYBA4P53673 196 aa15.4■□□□□ 0.06
CDKN3-207ENST00000543789 BAXQ07812 192 aa15.4■□□□□ 0.06
CDKN3-207ENST00000543789 EXOC3-AS1Q8N2X6 119 aa15.4■□□□□ 0.06
CDKN3-207ENST00000543789 A0A087WTM6 91 aa15.39■□□□□ 0.05
CDKN3-207ENST00000543789 PRAF2O60831 178 aa15.39■□□□□ 0.05
CDKN3-207ENST00000543789 CHAC2Q8WUX2 184 aa15.39■□□□□ 0.05
CDKN3-207ENST00000543789 BLNKQ8WV28 456 aa15.39■□□□□ 0.05
CDKN3-207ENST00000543789 C8orf49Q96NF6 230 aa15.39■□□□□ 0.05
CDKN3-207ENST00000543789 SDHCQ99643 169 aaPredicted RBP15.39■□□□□ 0.05
CDKN3-207ENST00000543789 C11orf1Q9H5F2 150 aa15.39■□□□□ 0.05
CDKN3-207ENST00000543789 AAMDCQ9H7C9 122 aa15.39■□□□□ 0.05
CDKN3-207ENST00000543789 MRPL16Q9NX20 251 aaKnown RBP15.39■□□□□ 0.05
CDKN3-207ENST00000543789 FAT1Q14517 4588 aa15.39■□□□□ 0.05
CDKN3-207ENST00000543789 IGHV1OR15-1A0A075B7D0 117 aa15.38■□□□□ 0.05
CDKN3-207ENST00000543789 UBE2L5PA0A1B0GUS4 154 aa15.38■□□□□ 0.05
CDKN3-207ENST00000543789 C5orf51A6NDU8 294 aa15.38■□□□□ 0.05
CDKN3-207ENST00000543789 PYYP10082 97 aa15.38■□□□□ 0.05
CDKN3-207ENST00000543789 PVALBP20472 110 aaPredicted RBP15.38■□□□□ 0.05
CDKN3-207ENST00000543789 KRTAP10-1P60331 282 aa15.38■□□□□ 0.05
CDKN3-207ENST00000543789 FHL2Q14192 279 aa15.38■□□□□ 0.05
CDKN3-207ENST00000543789 TMEM78Q5T7P6 136 aa15.38■□□□□ 0.05
CDKN3-207ENST00000543789 Q5VSD8 79 aa15.38■□□□□ 0.05
CDKN3-207ENST00000543789 NEGR1Q7Z3B1 354 aa15.38■□□□□ 0.05
CDKN3-207ENST00000543789 ZFAND2AQ8N6M9 145 aa15.38■□□□□ 0.05
CDKN3-207ENST00000543789 FRZBQ92765 325 aa15.38■□□□□ 0.05
CDKN3-207ENST00000543789 VGLL1Q99990 258 aa15.38■□□□□ 0.05
CDKN3-207ENST00000543789 ARPC5LQ9BPX5 153 aa15.38■□□□□ 0.05
CDKN3-207ENST00000543789 IGKV2-40A0A087WW87 121 aaPredicted RBP15.37■□□□□ 0.05
CDKN3-207ENST00000543789 IGKV2D-40P01614 121 aaPredicted RBP15.37■□□□□ 0.05
CDKN3-207ENST00000543789 SULT1A1P50225 295 aa15.37■□□□□ 0.05
CDKN3-207ENST00000543789 ICAM4Q14773 271 aa15.37■□□□□ 0.05
CDKN3-207ENST00000543789 LY96Q9Y6Y9 160 aa15.37■□□□□ 0.05
CDKN3-207ENST00000543789 DNAH10OSP0CZ25 163 aa15.36■□□□□ 0.05
CDKN3-207ENST00000543789 PRR9Q5T870 116 aa15.36■□□□□ 0.05
CDKN3-207ENST00000543789 Q6ZQT7 251 aa15.36■□□□□ 0.05
CDKN3-207ENST00000543789 C2orf50Q96LR7 162 aa15.36■□□□□ 0.05
CDKN3-207ENST00000543789 MRPL32Q9BYC8 188 aaKnown RBP15.36■□□□□ 0.05
CDKN3-207ENST00000543789 FGF7P21781 194 aa15.35■□□□□ 0.05
CDKN3-207ENST00000543789 HBG1P69891 147 aa15.35■□□□□ 0.05
CDKN3-207ENST00000543789 HBG2P69892 147 aa15.35■□□□□ 0.05
CDKN3-207ENST00000543789 FAM122CQ6P4D5 195 aa15.35■□□□□ 0.05
CDKN3-207ENST00000543789 STX12Q86Y82 276 aa15.35■□□□□ 0.05
CDKN3-207ENST00000543789 TMEM252Q8N6L7 170 aa15.35■□□□□ 0.05
CDKN3-207ENST00000543789 LYRM2Q9NU23 88 aaPredicted RBP15.35■□□□□ 0.05
CDKN3-207ENST00000543789 ZNF492Q9P255 531 aa15.35■□□□□ 0.05
CDKN3-207ENST00000543789 TRGV4A0A0C4DH28 118 aa15.34■□□□□ 0.05
CDKN3-207ENST00000543789 E5RGE8 158 aa15.34■□□□□ 0.05
CDKN3-207ENST00000543789 K7EP13 123 aa15.34■□□□□ 0.05
CDKN3-207ENST00000543789 IL7P13232 177 aa15.34■□□□□ 0.05
CDKN3-207ENST00000543789 ATP6V1FQ16864 119 aa15.34■□□□□ 0.05
CDKN3-207ENST00000543789 RBM38Q9H0Z9 239 aaKnown RBP15.34■□□□□ 0.05
CDKN3-207ENST00000543789 GPN1Q9HCN4 374 aaPredicted RBP15.34■□□□□ 0.05
CDKN3-207ENST00000543789 MSRB1Q9NZV6 116 aa15.34■□□□□ 0.05
CDKN3-207ENST00000543789 IGSF23A1L1A6 192 aa15.33■□□□□ 0.04
CDKN3-207ENST00000543789 EVI2AP22794 236 aa15.33■□□□□ 0.04
CDKN3-207ENST00000543789 S100A10P60903 97 aa15.33■□□□□ 0.04
CDKN3-207ENST00000543789 ZNF415Q09FC8 603 aa15.33■□□□□ 0.04
CDKN3-207ENST00000543789 GCSAMLQ5JQS6 135 aa15.33■□□□□ 0.04
CDKN3-207ENST00000543789 SLC25A2Q9BXI2 301 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms