RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 TMED6Q8WW62 240 aa12.89□□□□□ -0.35
TSFM-208ENST00000543727 FAM19A4Q96LR4 140 aa12.89□□□□□ -0.35
TSFM-208ENST00000543727 LENEPQ9Y5L5 61 aa12.89□□□□□ -0.35
TSFM-208ENST00000543727 DIRC3C9JPN6 131 aa12.88□□□□□ -0.35
TSFM-208ENST00000543727 CRISP2P16562 243 aa12.88□□□□□ -0.35
TSFM-208ENST00000543727 TAS2R60P59551 318 aa12.88□□□□□ -0.35
TSFM-208ENST00000543727 EIF5AL1Q6IS14 154 aaKnown RBP12.88□□□□□ -0.35
TSFM-208ENST00000543727 AGPAT4-IT1Q9H0P7 198 aa12.88□□□□□ -0.35
TSFM-208ENST00000543727 ZNF492Q9P255 531 aa12.88□□□□□ -0.35
TSFM-208ENST00000543727 TRAV12-2A0A075B6T6 113 aa12.87□□□□□ -0.35
TSFM-208ENST00000543727 IGKV2-40A0A087WW87 121 aaPredicted RBP12.87□□□□□ -0.35
TSFM-208ENST00000543727 LOC102723971A0A1B0GUV8 181 aa12.87□□□□□ -0.35
TSFM-208ENST00000543727 PGPA6NDG6 321 aa12.87□□□□□ -0.35
TSFM-208ENST00000543727 CXorf65A6NEN9 183 aa12.87□□□□□ -0.35
TSFM-208ENST00000543727 KLLNB2CW77 178 aa12.87□□□□□ -0.35
TSFM-208ENST00000543727 DEFB4AO15263 64 aa12.87□□□□□ -0.35
TSFM-208ENST00000543727 IGKV2D-40P01614 121 aaPredicted RBP12.87□□□□□ -0.35
TSFM-208ENST00000543727 ZNF138P52744 262 aa12.87□□□□□ -0.35
TSFM-208ENST00000543727 ZFAND6Q6FIF0 208 aa12.87□□□□□ -0.35
TSFM-208ENST00000543727 C5orf17Q8NAS9 161 aa12.87□□□□□ -0.35
TSFM-208ENST00000543727 NKX6-2Q9C056 277 aaPredicted RBP12.87□□□□□ -0.35
TSFM-208ENST00000543727 hCG_2014768A0A024R1R8 64 aa12.86□□□□□ -0.35
TSFM-208ENST00000543727 A0A1W2PRE2 83 aa12.86□□□□□ -0.35
TSFM-208ENST00000543727 C11orf94C9JXX5 98 aa12.86□□□□□ -0.35
TSFM-208ENST00000543727 EIF3GO75821 320 aaKnown RBP eCLIP12.86□□□□□ -0.35
TSFM-208ENST00000543727 ZNF726P1Q15940 193 aa12.86□□□□□ -0.35
TSFM-208ENST00000543727 GFI1BQ5VTD9 330 aa12.86□□□□□ -0.35
TSFM-208ENST00000543727 VGLL1Q99990 258 aa12.86□□□□□ -0.35
TSFM-208ENST00000543727 NIPSNAP3BQ9BS92 247 aa12.86□□□□□ -0.35
TSFM-208ENST00000543727 MAP1LC3B2A6NCE7 125 aa12.85□□□□□ -0.35
TSFM-208ENST00000543727 K7EQM0 130 aa12.85□□□□□ -0.35
TSFM-208ENST00000543727 SPART-AS1P0CW21 52 aa12.85□□□□□ -0.35
TSFM-208ENST00000543727 ERCC8Q13216 396 aa12.85□□□□□ -0.35
TSFM-208ENST00000543727 LGALSLQ3ZCW2 172 aaPredicted RBP12.85□□□□□ -0.35
TSFM-208ENST00000543727 ZNF493Q6ZR52 646 aa12.85□□□□□ -0.35
TSFM-208ENST00000543727 SSX7Q7RTT5 188 aa12.85□□□□□ -0.35
TSFM-208ENST00000543727 LINC01587Q99440 93 aa12.85□□□□□ -0.35
TSFM-208ENST00000543727 PYGO2Q9BRQ0 406 aa12.85□□□□□ -0.35
TSFM-208ENST00000543727 MAP1LC3BQ9GZQ8 125 aa12.85□□□□□ -0.35
TSFM-208ENST00000543727 KLK5Q9Y337 293 aaPredicted RBP12.85□□□□□ -0.35
TSFM-208ENST00000543727 ARL2-SNX15V9GYD0 113 aa12.85□□□□□ -0.35
TSFM-208ENST00000543727 CSMD3Q7Z407 3707 aa12.85□□□□□ -0.35
TSFM-208ENST00000543727 C7orf71A4D174 169 aa12.84□□□□□ -0.35
TSFM-208ENST00000543727 FBLL1A6NHQ2 334 aaKnown RBP12.84□□□□□ -0.35
TSFM-208ENST00000543727 PRB4P10163 310 aaPredicted RBP12.84□□□□□ -0.35
TSFM-208ENST00000543727 RAB5CP51148 216 aa12.84□□□□□ -0.35
TSFM-208ENST00000543727 PMS2P11Q13670 270 aa12.84□□□□□ -0.35
TSFM-208ENST00000543727 CEMP1Q6PRD7 247 aaPredicted RBP12.84□□□□□ -0.35
TSFM-208ENST00000543727 C16orf74Q96GX8 76 aa12.84□□□□□ -0.35
TSFM-208ENST00000543727 GPX1P07203 203 aa12.83□□□□□ -0.36
TSFM-208ENST00000543727 NANOS2P60321 138 aaKnown RBP12.83□□□□□ -0.36
TSFM-208ENST00000543727 ZFP69Q49AA0 526 aa12.83□□□□□ -0.36
TSFM-208ENST00000543727 SLC51BQ86UW2 128 aa12.83□□□□□ -0.36
TSFM-208ENST00000543727 IQCF2Q8IXL9 164 aa12.83□□□□□ -0.36
TSFM-208ENST00000543727 ZFAND2AQ8N6M9 145 aa12.83□□□□□ -0.36
TSFM-208ENST00000543727 TMEM263Q8WUH6 116 aaKnown RBP12.83□□□□□ -0.36
TSFM-208ENST00000543727 PHLDA1Q8WV24 401 aaPredicted RBP12.83□□□□□ -0.36
TSFM-208ENST00000543727 LINC00467Q9BRT7 94 aa12.83□□□□□ -0.36
TSFM-208ENST00000543727 TCEAL7Q9BRU2 100 aa12.83□□□□□ -0.36
TSFM-208ENST00000543727 LYRM9A8MSI8 78 aa12.82□□□□□ -0.36
TSFM-208ENST00000543727 CCDC28AQ8IWP9 274 aa12.82□□□□□ -0.36
TSFM-208ENST00000543727 DKK2Q9UBU2 259 aa12.82□□□□□ -0.36
TSFM-208ENST00000543727 YTHDF2Q9Y5A9 579 aaKnown RBP12.82□□□□□ -0.36
TSFM-208ENST00000543727 TRAV12-3A0A0B4J271 114 aa12.81□□□□□ -0.36
TSFM-208ENST00000543727 ZNF705GA8MUZ8 300 aaPredicted RBP12.81□□□□□ -0.36
TSFM-208ENST00000543727 GGTLC3B5MD39 225 aa12.81□□□□□ -0.36
TSFM-208ENST00000543727 TCRAP04437 139 aa12.81□□□□□ -0.36
TSFM-208ENST00000543727 KIR3DS1Q14943 382 aa12.81□□□□□ -0.36
TSFM-208ENST00000543727 GOLT1AQ6ZVE7 132 aa12.81□□□□□ -0.36
TSFM-208ENST00000543727 RNASE8Q8TDE3 154 aaKnown RBP12.81□□□□□ -0.36
TSFM-208ENST00000543727 MBD3L1Q8WWY6 194 aa12.81□□□□□ -0.36
TSFM-208ENST00000543727 CELA1Q9UNI1 258 aa12.81□□□□□ -0.36
TSFM-208ENST00000543727 TRAV10A0A0B4J240 114 aa12.8□□□□□ -0.36
TSFM-208ENST00000543727 ZNF324O75467 553 aaPredicted RBP12.8□□□□□ -0.36
TSFM-208ENST00000543727 FHITP49789 147 aa12.8□□□□□ -0.36
TSFM-208ENST00000543727 EMP1P54849 157 aa12.8□□□□□ -0.36
TSFM-208ENST00000543727 TCTAP57738 103 aa12.8□□□□□ -0.36
TSFM-208ENST00000543727 SUMO1P63165 101 aaKnown RBP12.8□□□□□ -0.36
TSFM-208ENST00000543727 FAM222AQ5U5X8 452 aa12.8□□□□□ -0.36
TSFM-208ENST00000543727 CYB561D1Q8N8Q1 229 aa12.8□□□□□ -0.36
TSFM-208ENST00000543727 ZNF680Q8NEM1 530 aa12.8□□□□□ -0.36
TSFM-208ENST00000543727 Q8TAT8 98 aa12.8□□□□□ -0.36
TSFM-208ENST00000543727 FAM213BQ8TBF2 198 aa12.8□□□□□ -0.36
TSFM-208ENST00000543727 ATG101Q9BSB4 218 aa12.8□□□□□ -0.36
TSFM-208ENST00000543727 EPDR1Q9UM22 224 aa12.8□□□□□ -0.36
TSFM-208ENST00000543727 RPH3ALQ9UNE2 315 aa12.8□□□□□ -0.36
TSFM-208ENST00000543727 FAM74A7A6NL05 159 aa12.79□□□□□ -0.36
TSFM-208ENST00000543727 PPT1P50897 306 aa12.79□□□□□ -0.36
TSFM-208ENST00000543727 FGF8P55075 233 aaPredicted RBP12.79□□□□□ -0.36
TSFM-208ENST00000543727 C12orf74Q32Q52 190 aa12.79□□□□□ -0.36
TSFM-208ENST00000543727 C9orf62Q8N4C0 152 aa12.79□□□□□ -0.36
TSFM-208ENST00000543727 TMEM75Q8N9X5 138 aa12.79□□□□□ -0.36
TSFM-208ENST00000543727 HIST1H2BAQ96A08 127 aa12.79□□□□□ -0.36
TSFM-208ENST00000543727 NDFIP1Q9BT67 221 aa12.79□□□□□ -0.36
TSFM-208ENST00000543727 TIMM8BQ9Y5J9 83 aaPredicted RBP12.79□□□□□ -0.36
TSFM-208ENST00000543727 TENM2Q9NT68 2774 aa12.78□□□□□ -0.36
TSFM-208ENST00000543727 J3KRW8 73 aa12.78□□□□□ -0.36
TSFM-208ENST00000543727 RNASE4P34096 147 aaKnown RBP12.78□□□□□ -0.36
TSFM-208ENST00000543727 GNG5P63218 68 aa12.78□□□□□ -0.36
TSFM-208ENST00000543727 CD300CQ08708 224 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms