RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 CSMD2Q7Z408 3487 aa10.81□□□□□ -0.68
LDB3-207ENST00000542786 A0A1W2PS18 150 aa10.81□□□□□ -0.68
LDB3-207ENST00000542786 TMEM89A2RUT3 159 aa10.81□□□□□ -0.68
LDB3-207ENST00000542786 SOCS3O14543 225 aa10.81□□□□□ -0.68
LDB3-207ENST00000542786 ARMS2P0C7Q2 107 aa10.81□□□□□ -0.68
LDB3-207ENST00000542786 IQCJQ1A5X6 159 aa10.81□□□□□ -0.68
LDB3-207ENST00000542786 PRR31Q5SQ13 230 aa10.81□□□□□ -0.68
LDB3-207ENST00000542786 KCNS1Q96KK3 526 aa10.81□□□□□ -0.68
LDB3-207ENST00000542786 CREBBPQ92793 2442 aa10.8□□□□□ -0.68
LDB3-207ENST00000542786 A0A1B0GUT8 65 aa10.8□□□□□ -0.68
LDB3-207ENST00000542786 Q6AWC8 147 aa10.8□□□□□ -0.68
LDB3-207ENST00000542786 C10orf99Q6UWK7 81 aa10.8□□□□□ -0.68
LDB3-207ENST00000542786 AGPAT4-IT1Q9H0P7 198 aa10.8□□□□□ -0.68
LDB3-207ENST00000542786 RNF114Q9Y508 228 aa10.8□□□□□ -0.68
LDB3-207ENST00000542786 APCP25054 2843 aa10.79□□□□□ -0.68
LDB3-207ENST00000542786 GPX1P07203 203 aa10.79□□□□□ -0.68
LDB3-207ENST00000542786 SRSF2Q01130 221 aaKnown RBP10.79□□□□□ -0.68
LDB3-207ENST00000542786 FAM209BQ5JX69 171 aa10.79□□□□□ -0.68
LDB3-207ENST00000542786 MYOZ3Q8TDC0 251 aa10.79□□□□□ -0.68
LDB3-207ENST00000542786 C20orf173Q96LM9 149 aa10.79□□□□□ -0.68
LDB3-207ENST00000542786 NPFFR1Q9GZQ6 430 aa10.79□□□□□ -0.68
LDB3-207ENST00000542786 ZNF702PQ9H963 129 aa10.79□□□□□ -0.68
LDB3-207ENST00000542786 PPP1R14DQ9NXH3 145 aa10.79□□□□□ -0.68
LDB3-207ENST00000542786 LOC102724200A0A096LPH7 203 aaPredicted RBP10.78□□□□□ -0.68
LDB3-207ENST00000542786 J3QKU1 62 aa10.78□□□□□ -0.68
LDB3-207ENST00000542786 C9orf47Q6ZRZ4 202 aa10.78□□□□□ -0.68
LDB3-207ENST00000542786 URB1-AS1Q96HZ7 61 aa10.78□□□□□ -0.68
LDB3-207ENST00000542786 TMEM189A5PLL7 270 aa10.78□□□□□ -0.68
LDB3-207ENST00000542786 IGLC6P0CF74 106 aa10.78□□□□□ -0.68
LDB3-207ENST00000542786 PLA2G2AP14555 144 aa10.78□□□□□ -0.68
LDB3-207ENST00000542786 CTRLP40313 264 aa10.78□□□□□ -0.68
LDB3-207ENST00000542786 IL17RELQ6ZVW7 336 aa10.78□□□□□ -0.68
LDB3-207ENST00000542786 CLEC5AQ9NY25 188 aa10.78□□□□□ -0.68
LDB3-207ENST00000542786 TENM4Q6N022 2769 aa10.78□□□□□ -0.68
LDB3-207ENST00000542786 IGHV7-4-1A0A0J9YVY3 117 aa10.77□□□□□ -0.69
LDB3-207ENST00000542786 A0A1B0GW15 77 aa10.77□□□□□ -0.69
LDB3-207ENST00000542786 RIGQ13278 110 aa10.77□□□□□ -0.69
LDB3-207ENST00000542786 CYB5R2Q6BCY4 276 aa10.77□□□□□ -0.69
LDB3-207ENST00000542786 PEF1Q9UBV8 284 aaKnown RBP10.77□□□□□ -0.69
LDB3-207ENST00000542786 ZFHX3Q15911 3703 aa10.77□□□□□ -0.69
LDB3-207ENST00000542786 ZNF324O75467 553 aaPredicted RBP10.76□□□□□ -0.69
LDB3-207ENST00000542786 CD33P20138 364 aa10.76□□□□□ -0.69
LDB3-207ENST00000542786 ZNF138P52744 262 aa10.76□□□□□ -0.69
LDB3-207ENST00000542786 HIST2H2BCQ6DN03 193 aa10.76□□□□□ -0.69
LDB3-207ENST00000542786 ZNF493Q6ZR52 646 aa10.76□□□□□ -0.69
LDB3-207ENST00000542786 NIT1Q86X76 327 aa10.76□□□□□ -0.69
LDB3-207ENST00000542786 NDFIP1Q9BT67 221 aa10.76□□□□□ -0.69
LDB3-207ENST00000542786 K7EMT4 169 aa10.76□□□□□ -0.69
LDB3-207ENST00000542786 BMI1P35226 326 aa10.76□□□□□ -0.69
LDB3-207ENST00000542786 RPS20P60866 119 aaKnown RBP10.76□□□□□ -0.69
LDB3-207ENST00000542786 TM4SF20Q53R12 229 aa10.76□□□□□ -0.69
LDB3-207ENST00000542786 LYZL1Q6UWQ5 148 aa10.76□□□□□ -0.69
LDB3-207ENST00000542786 Q8N976 141 aa10.76□□□□□ -0.69
LDB3-207ENST00000542786 TMSB15BA0A087X1C1 80 aa10.75□□□□□ -0.69
LDB3-207ENST00000542786 HOXA3O43365 443 aaPredicted RBP10.75□□□□□ -0.69
LDB3-207ENST00000542786 LINC01559Q495D7 138 aa10.75□□□□□ -0.69
LDB3-207ENST00000542786 Q8N2B8 174 aa10.75□□□□□ -0.69
LDB3-207ENST00000542786 RNF152Q8N8N0 203 aa10.75□□□□□ -0.69
LDB3-207ENST00000542786 SAMD10Q9BYL1 202 aa10.75□□□□□ -0.69
LDB3-207ENST00000542786 DAZ1Q9NQZ3 744 aaKnown RBP10.75□□□□□ -0.69
LDB3-207ENST00000542786 C11orf21Q9P2W6 132 aa10.75□□□□□ -0.69
LDB3-207ENST00000542786 SMPXQ9UHP9 88 aa10.75□□□□□ -0.69
LDB3-207ENST00000542786 NAGKQ9UJ70 344 aa10.75□□□□□ -0.69
LDB3-207ENST00000542786 EDN2P20800 178 aa10.74□□□□□ -0.69
LDB3-207ENST00000542786 PKIAP61925 76 aa10.74□□□□□ -0.69
LDB3-207ENST00000542786 FOXE3Q13461 319 aa10.74□□□□□ -0.69
LDB3-207ENST00000542786 SIGLECL1Q8N7X8 197 aa10.74□□□□□ -0.69
LDB3-207ENST00000542786 C16orf92Q96LL3 132 aa10.74□□□□□ -0.69
LDB3-207ENST00000542786 RHPN1-AS1Q9BWJ2 59 aa10.74□□□□□ -0.69
LDB3-207ENST00000542786 CNFNQ9BYD5 112 aa10.74□□□□□ -0.69
LDB3-207ENST00000542786 NRN1Q9NPD7 142 aa10.74□□□□□ -0.69
LDB3-207ENST00000542786 FABP5P3A8MUU1 101 aa10.74□□□□□ -0.69
LDB3-207ENST00000542786 RPLP1P05386 114 aaKnown RBP10.74□□□□□ -0.69
LDB3-207ENST00000542786 AMTP48728 403 aa10.74□□□□□ -0.69
LDB3-207ENST00000542786 ZNF664Q8N3J9 261 aa10.74□□□□□ -0.69
LDB3-207ENST00000542786 WFDC11Q8NEX6 87 aa10.74□□□□□ -0.69
LDB3-207ENST00000542786 DOPEY2Q9Y3R5 2298 aa10.73□□□□□ -0.69
LDB3-207ENST00000542786 TMEM213A2RRL7 107 aa10.73□□□□□ -0.69
LDB3-207ENST00000542786 PMCHP20382 165 aa10.73□□□□□ -0.69
LDB3-207ENST00000542786 FAM19A2Q8N3H0 131 aa10.73□□□□□ -0.69
LDB3-207ENST00000542786 IGKV3D-20A0A0C4DH25 116 aa10.72□□□□□ -0.69
LDB3-207ENST00000542786 HIST1H1AQ02539 215 aaPredicted RBP10.72□□□□□ -0.69
LDB3-207ENST00000542786 TMEM78Q5T7P6 136 aa10.72□□□□□ -0.69
LDB3-207ENST00000542786 FER1L6-AS1Q8NA97 138 aa10.72□□□□□ -0.69
LDB3-207ENST00000542786 PRO1933Q9H354 126 aa10.72□□□□□ -0.69
LDB3-207ENST00000542786 LENEPQ9Y5L5 61 aa10.72□□□□□ -0.69
LDB3-207ENST00000542786 U3KQK5 164 aa10.72□□□□□ -0.69
LDB3-207ENST00000542786 ITPR3Q14573 2671 aa10.72□□□□□ -0.69
LDB3-207ENST00000542786 SCGB1D1O95968 90 aa10.72□□□□□ -0.69
LDB3-207ENST00000542786 ELANEP08246 267 aa10.72□□□□□ -0.69
LDB3-207ENST00000542786 CTAG1AP78358 180 aa10.72□□□□□ -0.69
LDB3-207ENST00000542786 PRR9Q5T870 116 aa10.72□□□□□ -0.69
LDB3-207ENST00000542786 TEX43Q6ZNM6 134 aa10.72□□□□□ -0.69
LDB3-207ENST00000542786 ZNF738Q8NE65 137 aa10.72□□□□□ -0.69
LDB3-207ENST00000542786 FAM19A4Q96LR4 140 aa10.72□□□□□ -0.69
LDB3-207ENST00000542786 TPPP3Q9BW30 176 aa10.72□□□□□ -0.69
LDB3-207ENST00000542786 MXRA5Q9NR99 2828 aa10.71□□□□□ -0.69
LDB3-207ENST00000542786 M0QZ24 198 aa10.71□□□□□ -0.69
LDB3-207ENST00000542786 LGALS1P09382 135 aaKnown RBP10.71□□□□□ -0.69
LDB3-207ENST00000542786 FAM106AQ4KMX7 169 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms