RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 GPR146Q96CH1 333 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 PACRGQ96M98 296 aaPredicted RBP4.01□□□□□ -1.77
CPSF7-220ENST00000541963 NIPSNAP3BQ9BS92 247 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 C20orf24Q9BUV8 137 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 ARV1Q9H2C2 271 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 DOK5Q9P104 306 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 TMEM56-RWDD3S4R434 201 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 NOTCH3Q9UM47 2321 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 TRAV30A0A087WSZ9 112 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 A0A087WYN8 130 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 IGHV3-21A0A0B4J1V1 117 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 HSBP1L1C9JCN9 74 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 I3L2K1 104 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 K7EIM0 57 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 CHEK1O14757 476 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 DLEU1O43261 78 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 YIF1AO95070 293 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 P0C879 139 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 C8orf88P0DMB2 117 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 OPRK1P41145 380 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 RND2P52198 227 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 MFAP2P55001 183 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 ATP5IP56385 69 aaPredicted RBP4□□□□□ -1.77
CPSF7-220ENST00000541963 SPINK9Q5DT21 86 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 GFI1BQ5VTD9 330 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 Q6ZRG5 221 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 Q6ZTC4 211 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 NOTCH2NLQ7Z3S9 236 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 TMED4Q7Z7H5 227 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 OR52B4Q8NGK2 314 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 OR10G7Q8NGN6 311 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 OR10D4PQ8NGN7 298 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 RNASE8Q8TDE3 154 aaKnown RBP4□□□□□ -1.77
CPSF7-220ENST00000541963 GNPNAT1Q96EK6 184 aaPredicted RBP4□□□□□ -1.77
CPSF7-220ENST00000541963 TVP23CQ96ET8 276 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 YPEL4Q96NS1 127 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 IMMP2LQ96T52 175 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 GINS3Q9BRX5 216 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 SPXQ9BT56 116 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 EIF5A2Q9GZV4 153 aaKnown RBP4□□□□□ -1.77
CPSF7-220ENST00000541963 DAZ1Q9NQZ3 744 aaKnown RBP4□□□□□ -1.77
CPSF7-220ENST00000541963 CYTL1Q9NRR1 136 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 LYRM2Q9NU23 88 aaPredicted RBP4□□□□□ -1.77
CPSF7-220ENST00000541963 U3KQK5 164 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 DNAH3Q8TD57 4116 aa4□□□□□ -1.77
CPSF7-220ENST00000541963 SORL1Q92673 2214 aa3.99□□□□□ -1.77
CPSF7-220ENST00000541963 IGHV3-35A0A0C4DH35 117 aa3.99□□□□□ -1.77
CPSF7-220ENST00000541963 A0A1B0GU03 582 aa3.99□□□□□ -1.77
CPSF7-220ENST00000541963 TMEM213A2RRL7 107 aa3.99□□□□□ -1.77
CPSF7-220ENST00000541963 SFT2D2O95562 160 aa3.99□□□□□ -1.77
CPSF7-220ENST00000541963 TMEM50AO95807 157 aa3.99□□□□□ -1.77
CPSF7-220ENST00000541963 CTSGP08311 255 aa3.99□□□□□ -1.77
CPSF7-220ENST00000541963 RNASE2P10153 161 aaKnown RBP3.99□□□□□ -1.77
CPSF7-220ENST00000541963 P2RY1P47900 373 aa3.99□□□□□ -1.77
CPSF7-220ENST00000541963 CAMLGP49069 296 aa3.99□□□□□ -1.77
CPSF7-220ENST00000541963 NDUFA6P56556 154 aa3.99□□□□□ -1.77
CPSF7-220ENST00000541963 PAFAH1B2P68402 229 aa3.99□□□□□ -1.77
CPSF7-220ENST00000541963 RPL19P84098 196 aaKnown RBP3.99□□□□□ -1.77
CPSF7-220ENST00000541963 C2orf83Q53S99 150 aa3.99□□□□□ -1.77
CPSF7-220ENST00000541963 KHDC3LQ587J8 217 aa3.99□□□□□ -1.77
CPSF7-220ENST00000541963 PVRIGQ6DKI7 326 aa3.99□□□□□ -1.77
CPSF7-220ENST00000541963 UNQ9165/PRO28630Q6UXU0 137 aa3.99□□□□□ -1.77
CPSF7-220ENST00000541963 SBSPONQ8IVN8 264 aa3.99□□□□□ -1.77
CPSF7-220ENST00000541963 STHQ8IWL8 128 aa3.99□□□□□ -1.77
CPSF7-220ENST00000541963 FAM24BQ8N5W8 94 aa3.99□□□□□ -1.77
CPSF7-220ENST00000541963 TMEM230Q96A57 120 aa3.99□□□□□ -1.77
CPSF7-220ENST00000541963 LINC00479Q96M42 142 aa3.99□□□□□ -1.77
CPSF7-220ENST00000541963 SPAG8Q99932 426 aaPredicted RBP3.99□□□□□ -1.77
CPSF7-220ENST00000541963 OPRPNQ99935 248 aaPredicted RBP3.99□□□□□ -1.77
CPSF7-220ENST00000541963 CHRDL1Q9BU40 450 aa3.99□□□□□ -1.77
CPSF7-220ENST00000541963 KRTAP1-5Q9BYS1 174 aa3.99□□□□□ -1.77
CPSF7-220ENST00000541963 TMEM231Q9H6L2 316 aa3.99□□□□□ -1.77
CPSF7-220ENST00000541963 MEGF8Q7Z7M0 2845 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 TRAV1-1A0A0B4J248 108 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 KIR2DL5BA0A0G2JN68 375 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 KIR2DL5BA0A0G2JPC4 375 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 A0A0G2JRQ6 117 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 IGHV7-4-1A0A0J9YVY3 117 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 IZUMO1RA6ND01 250 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 OR4C46A6NHA9 309 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 OR11H12B2RN74 326 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 HIST1H2BKO60814 126 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 IFNA1P01562 189 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 HIST1H2BJP06899 126 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 SLC25A6P12236 298 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 HIST1H2BOP23527 126 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 NPPCP23582 126 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 MT3P25713 68 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 NPY1RP25929 384 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 RPL12P30050 165 aaKnown RBP3.98□□□□□ -1.77
CPSF7-220ENST00000541963 OR10J1P30954 320 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 HIST1H2BBP33778 126 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 HIST1H2BDP58876 126 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 RAB11AP62491 216 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 HIST1H2BCP62807 126 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 SUPT4H1P63272 117 aaKnown RBP3.98□□□□□ -1.77
CPSF7-220ENST00000541963 AKR1C1Q04828 323 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 PPP1R1AQ13522 171 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 GAMTQ14353 236 aa3.98□□□□□ -1.77
CPSF7-220ENST00000541963 HIST2H2BEQ16778 126 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms