RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 TRAV10A0A0B4J240 114 aa4.1□□□□□ -1.75
SUDS3-202ENST00000541280 FAM24AA6NFZ4 105 aa4.1□□□□□ -1.75
SUDS3-202ENST00000541280 A8MTW9 85 aa4.1□□□□□ -1.75
SUDS3-202ENST00000541280 CCSO14618 274 aa4.1□□□□□ -1.75
SUDS3-202ENST00000541280 ZNF253O75346 499 aa4.1□□□□□ -1.75
SUDS3-202ENST00000541280 CST7O76096 145 aa4.1□□□□□ -1.75
SUDS3-202ENST00000541280 S100A10P60903 97 aa4.1□□□□□ -1.75
SUDS3-202ENST00000541280 FGL1Q08830 312 aa4.1□□□□□ -1.75
SUDS3-202ENST00000541280 PSG3Q16557 428 aa4.1□□□□□ -1.75
SUDS3-202ENST00000541280 FAM78BQ5VT40 261 aa4.1□□□□□ -1.75
SUDS3-202ENST00000541280 C10orf113Q5VZT2 155 aa4.1□□□□□ -1.75
SUDS3-202ENST00000541280 LGALS9CQ6DKI2 356 aa4.1□□□□□ -1.75
SUDS3-202ENST00000541280 ZNF705AQ6ZN79 300 aaPredicted RBP4.1□□□□□ -1.75
SUDS3-202ENST00000541280 NRARPQ7Z6K4 114 aa4.1□□□□□ -1.75
SUDS3-202ENST00000541280 TMEM256Q8N2U0 113 aa4.1□□□□□ -1.75
SUDS3-202ENST00000541280 ZNF709Q8N972 641 aa4.1□□□□□ -1.75
SUDS3-202ENST00000541280 THAP6Q8TBB0 222 aa4.1□□□□□ -1.75
SUDS3-202ENST00000541280 FAM210BQ96KR6 192 aa4.1□□□□□ -1.75
SUDS3-202ENST00000541280 IGF2BP2-AS1Q96M15 143 aa4.1□□□□□ -1.75
SUDS3-202ENST00000541280 C11orf1Q9H5F2 150 aa4.1□□□□□ -1.75
SUDS3-202ENST00000541280 XCL2Q9UBD3 114 aa4.1□□□□□ -1.75
SUDS3-202ENST00000541280 PRELID1Q9Y255 219 aa4.1□□□□□ -1.75
SUDS3-202ENST00000541280 PXMP4Q9Y6I8 212 aa4.1□□□□□ -1.75
SUDS3-202ENST00000541280 TGP01266 2768 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 A0A1B0GVY2 172 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 ZNF705FA8MVS1 300 aaPredicted RBP4.09□□□□□ -1.75
SUDS3-202ENST00000541280 C17orf112F2Z3M2 114 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 SSNA1O43805 119 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 HBE1P02100 147 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 ZNF705DP0CH99 300 aaPredicted RBP4.09□□□□□ -1.75
SUDS3-202ENST00000541280 ZNF705BP0CI00 300 aaPredicted RBP4.09□□□□□ -1.75
SUDS3-202ENST00000541280 RBMY1A1P0DJD3 496 aaKnown RBP4.09□□□□□ -1.75
SUDS3-202ENST00000541280 RBMY1CP0DJD4 496 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 CXCL3P19876 107 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 C4BPBP20851 252 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 TSPOP30536 169 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 PDE6HQ13956 83 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 OPCMLQ14982 345 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 OXA1LQ15070 435 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 RBMY1FQ15415 496 aaKnown RBP4.09□□□□□ -1.75
SUDS3-202ENST00000541280 RRN3P1Q2M238 152 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 PATE2Q6UY27 113 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 PQLC2Q6ZP29 291 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 ZNF738Q8NE65 137 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 OR8A1Q8NGG7 326 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 OR10J6PQ8NGY7 276 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 ASB13Q8WXK3 278 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 TMEM37Q8WXS4 190 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 MRPL53Q96EL3 112 aaKnown RBP4.09□□□□□ -1.75
SUDS3-202ENST00000541280 MGST2Q99735 147 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 C20orf144Q9BQM9 153 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 TMEM208Q9BTX3 173 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 RNF126Q9BV68 326 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 SCRT1Q9BWW7 348 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 ZNF331Q9NQX6 463 aaPredicted RBP4.09□□□□□ -1.75
SUDS3-202ENST00000541280 SLC39A9Q9NUM3 307 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 TMEM14CQ9P0S9 112 aa4.09□□□□□ -1.75
SUDS3-202ENST00000541280 TRAV8-2A0A0B4J237 113 aa4.08□□□□□ -1.76
SUDS3-202ENST00000541280 IGSF23A1L1A6 192 aa4.08□□□□□ -1.76
SUDS3-202ENST00000541280 CCNKO75909 580 aa4.08□□□□□ -1.76
SUDS3-202ENST00000541280 LY6G6CO95867 125 aa4.08□□□□□ -1.76
SUDS3-202ENST00000541280 INSP01308 110 aa4.08□□□□□ -1.76
SUDS3-202ENST00000541280 IFNA5P01569 189 aa4.08□□□□□ -1.76
SUDS3-202ENST00000541280 HIST1H1EP10412 219 aaKnown RBP4.08□□□□□ -1.76
SUDS3-202ENST00000541280 HLA-DMBP28068 263 aa4.08□□□□□ -1.76
SUDS3-202ENST00000541280 CNN1P51911 297 aaKnown RBP4.08□□□□□ -1.76
SUDS3-202ENST00000541280 TAS2R60P59551 318 aa4.08□□□□□ -1.76
SUDS3-202ENST00000541280 RHOBP62745 196 aa4.08□□□□□ -1.76
SUDS3-202ENST00000541280 RPL24P83731 157 aaKnown RBP4.08□□□□□ -1.76
SUDS3-202ENST00000541280 IFITM3Q01628 133 aa4.08□□□□□ -1.76
SUDS3-202ENST00000541280 EWSR1Q01844 656 aaKnown RBP eCLIP4.08□□□□□ -1.76
SUDS3-202ENST00000541280 ZNF876PQ49A33 203 aa4.08□□□□□ -1.76
SUDS3-202ENST00000541280 ZNF493Q6ZR52 646 aa4.08□□□□□ -1.76
SUDS3-202ENST00000541280 OR5C1Q8NGR4 320 aa4.08□□□□□ -1.76
SUDS3-202ENST00000541280 SCGB1C1Q8TD33 95 aa4.08□□□□□ -1.76
SUDS3-202ENST00000541280 PPP1R1CQ8WVI7 109 aa4.08□□□□□ -1.76
SUDS3-202ENST00000541280 RPUSD4Q96CM3 377 aaKnown RBP4.08□□□□□ -1.76
SUDS3-202ENST00000541280 ST6GAL2Q96JF0 529 aa4.08□□□□□ -1.76
SUDS3-202ENST00000541280 NPCDR1Q9BY65 106 aa4.08□□□□□ -1.76
SUDS3-202ENST00000541280 DEFB131BA0A096LNP1 70 aa4.07□□□□□ -1.76
SUDS3-202ENST00000541280 LYRM9A8MSI8 78 aa4.07□□□□□ -1.76
SUDS3-202ENST00000541280 IGLL5B9A064 214 aa4.07□□□□□ -1.76
SUDS3-202ENST00000541280 USP17L23D6RBM5 183 aa4.07□□□□□ -1.76
SUDS3-202ENST00000541280 F6UB75 175 aa4.07□□□□□ -1.76
SUDS3-202ENST00000541280 BOLA2-SMG1P6H3BVE0 249 aa4.07□□□□□ -1.76
SUDS3-202ENST00000541280 H7BYZ3 331 aa4.07□□□□□ -1.76
SUDS3-202ENST00000541280 MRPS12O15235 138 aaKnown RBP4.07□□□□□ -1.76
SUDS3-202ENST00000541280 PTTG1O95997 202 aa4.07□□□□□ -1.76
SUDS3-202ENST00000541280 IGLC2P0DOY2 106 aa4.07□□□□□ -1.76
SUDS3-202ENST00000541280 FGF7P21781 194 aa4.07□□□□□ -1.76
SUDS3-202ENST00000541280 CDKN1BP46527 198 aa4.07□□□□□ -1.76
SUDS3-202ENST00000541280 C12orf74Q32Q52 190 aa4.07□□□□□ -1.76
SUDS3-202ENST00000541280 LRRC37A5PQ49AS3 106 aa4.07□□□□□ -1.76
SUDS3-202ENST00000541280 GDF5OSQ5U4N7 250 aa4.07□□□□□ -1.76
SUDS3-202ENST00000541280 MIC13Q5XKP0 118 aa4.07□□□□□ -1.76
SUDS3-202ENST00000541280 AMTNQ6UX39 209 aa4.07□□□□□ -1.76
SUDS3-202ENST00000541280 LYPD1Q8N2G4 141 aa4.07□□□□□ -1.76
SUDS3-202ENST00000541280 OR11H7Q8NGC8 314 aa4.07□□□□□ -1.76
SUDS3-202ENST00000541280 SAT2Q96F10 170 aaPredicted RBP4.07□□□□□ -1.76
SUDS3-202ENST00000541280 LINC00477Q96M19 166 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms