RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 RBMY1DP0C7P1 496 aaKnown RBP6.89□□□□□ -1.31
DDX55-208ENST00000541259 CNN1P51911 297 aaKnown RBP6.89□□□□□ -1.31
DDX55-208ENST00000541259 CMC4P56277 68 aaPredicted RBP6.89□□□□□ -1.31
DDX55-208ENST00000541259 HIST1H1AQ02539 215 aaPredicted RBP6.89□□□□□ -1.31
DDX55-208ENST00000541259 EBLN2Q6P2I7 272 aa6.89□□□□□ -1.31
DDX55-208ENST00000541259 FOXI2Q6ZQN5 318 aa6.89□□□□□ -1.31
DDX55-208ENST00000541259 C2CD4CQ8TF44 421 aa6.89□□□□□ -1.31
DDX55-208ENST00000541259 FAM110AQ9BQ89 295 aa6.89□□□□□ -1.31
DDX55-208ENST00000541259 TXNDC17Q9BRA2 123 aa6.89□□□□□ -1.31
DDX55-208ENST00000541259 ATG101Q9BSB4 218 aa6.89□□□□□ -1.31
DDX55-208ENST00000541259 DERL1Q9BUN8 251 aa6.89□□□□□ -1.31
DDX55-208ENST00000541259 MED9Q9NWA0 146 aa6.89□□□□□ -1.31
DDX55-208ENST00000541259 RAB19A4D1S5 217 aa6.88□□□□□ -1.31
DDX55-208ENST00000541259 NPIPB6E9PJ23 425 aa6.88□□□□□ -1.31
DDX55-208ENST00000541259 F6UZH7 168 aa6.88□□□□□ -1.31
DDX55-208ENST00000541259 IGLV2-11P01706 119 aa6.88□□□□□ -1.31
DDX55-208ENST00000541259 CT45A10P0DMU9 189 aa6.88□□□□□ -1.31
DDX55-208ENST00000541259 HLA-DRB4P13762 266 aa6.88□□□□□ -1.31
DDX55-208ENST00000541259 TAGLN2P37802 199 aaKnown RBP6.88□□□□□ -1.31
DDX55-208ENST00000541259 CEBPGP53567 150 aa6.88□□□□□ -1.31
DDX55-208ENST00000541259 PEA15Q15121 130 aa6.88□□□□□ -1.31
DDX55-208ENST00000541259 C9orf47Q6ZRZ4 202 aa6.88□□□□□ -1.31
DDX55-208ENST00000541259 ARL6IP6Q8N6S5 226 aa6.88□□□□□ -1.31
DDX55-208ENST00000541259 CYB561D1Q8N8Q1 229 aa6.88□□□□□ -1.31
DDX55-208ENST00000541259 OR4B1Q8NGF8 309 aa6.88□□□□□ -1.31
DDX55-208ENST00000541259 OR10J6PQ8NGY7 276 aa6.88□□□□□ -1.31
DDX55-208ENST00000541259 Q8TAT8 98 aa6.88□□□□□ -1.31
DDX55-208ENST00000541259 HIST1H2BAQ96A08 127 aa6.88□□□□□ -1.31
DDX55-208ENST00000541259 C11orf52Q96A22 123 aa6.88□□□□□ -1.31
DDX55-208ENST00000541259 SRD5A3Q9H8P0 318 aa6.88□□□□□ -1.31
DDX55-208ENST00000541259 TREM1Q9NP99 234 aa6.88□□□□□ -1.31
DDX55-208ENST00000541259 AURKAIP1Q9NWT8 199 aaPredicted RBP6.88□□□□□ -1.31
DDX55-208ENST00000541259 ZMAT5Q9UDW3 170 aaKnown RBP6.88□□□□□ -1.31
DDX55-208ENST00000541259 HLA-DRB4X5D2U9 266 aa6.88□□□□□ -1.31
DDX55-208ENST00000541259 RBAKDNA6NC62 111 aa6.87□□□□□ -1.31
DDX55-208ENST00000541259 PDE6DO43924 150 aa6.87□□□□□ -1.31
DDX55-208ENST00000541259 RPL35AP18077 110 aaKnown RBP6.87□□□□□ -1.31
DDX55-208ENST00000541259 AKR1C3P42330 323 aa6.87□□□□□ -1.31
DDX55-208ENST00000541259 FXYD7P58549 80 aa6.87□□□□□ -1.31
DDX55-208ENST00000541259 PRNTQ86SH4 94 aa6.87□□□□□ -1.31
DDX55-208ENST00000541259 TRPT1Q86TN4 253 aaKnown RBP6.87□□□□□ -1.31
DDX55-208ENST00000541259 STHQ8IWL8 128 aa6.87□□□□□ -1.31
DDX55-208ENST00000541259 SLC7A5P1Q8MH63 180 aa6.87□□□□□ -1.31
DDX55-208ENST00000541259 TVP23CQ96ET8 276 aa6.87□□□□□ -1.31
DDX55-208ENST00000541259 TCEAL7Q9BRU2 100 aa6.87□□□□□ -1.31
DDX55-208ENST00000541259 PSG8Q9UQ74 426 aa6.87□□□□□ -1.31
DDX55-208ENST00000541259 KLF12Q9Y4X4 402 aa6.87□□□□□ -1.31
DDX55-208ENST00000541259 DNAH9Q9NYC9 4486 aa6.87□□□□□ -1.31
DDX55-208ENST00000541259 A8MTW9 85 aa6.86□□□□□ -1.31
DDX55-208ENST00000541259 TMEM250H0YL14 139 aa6.86□□□□□ -1.31
DDX55-208ENST00000541259 K7EIL1 84 aa6.86□□□□□ -1.31
DDX55-208ENST00000541259 DUSP14O95147 198 aaKnown RBP6.86□□□□□ -1.31
DDX55-208ENST00000541259 IGHV4-30-4P0DP06 118 aa6.86□□□□□ -1.31
DDX55-208ENST00000541259 RPL35P42766 123 aaKnown RBP6.86□□□□□ -1.31
DDX55-208ENST00000541259 FLI1Q01543 452 aaPredicted RBP6.86□□□□□ -1.31
DDX55-208ENST00000541259 KIR3DS1Q14943 382 aa6.86□□□□□ -1.31
DDX55-208ENST00000541259 TMEM183BQ1AE95 376 aa6.86□□□□□ -1.31
DDX55-208ENST00000541259 ZNF674Q2M3X9 581 aa6.86□□□□□ -1.31
DDX55-208ENST00000541259 TMEM78Q5T7P6 136 aa6.86□□□□□ -1.31
DDX55-208ENST00000541259 AMTNQ6UX39 209 aa6.86□□□□□ -1.31
DDX55-208ENST00000541259 Q8N3U1 123 aa6.86□□□□□ -1.31
DDX55-208ENST00000541259 TMEM75Q8N9X5 138 aa6.86□□□□□ -1.31
DDX55-208ENST00000541259 FAM19A4Q96LR4 140 aa6.86□□□□□ -1.31
DDX55-208ENST00000541259 LINC00477Q96M19 166 aa6.86□□□□□ -1.31
DDX55-208ENST00000541259 C8orf49Q96NF6 230 aa6.86□□□□□ -1.31
DDX55-208ENST00000541259 SLC35B3Q9H1N7 401 aa6.86□□□□□ -1.31
DDX55-208ENST00000541259 ZNF492Q9P255 531 aa6.86□□□□□ -1.31
DDX55-208ENST00000541259 TMA7Q9Y2S6 64 aaKnown RBP6.86□□□□□ -1.31
DDX55-208ENST00000541259 TRBV20OR9-2A0A075B6H5 130 aa6.85□□□□□ -1.31
DDX55-208ENST00000541259 SERTM2A0A1B0GWG4 89 aa6.85□□□□□ -1.31
DDX55-208ENST00000541259 PGPEP1LA6NFU8 196 aa6.85□□□□□ -1.31
DDX55-208ENST00000541259 J3KRW8 73 aa6.85□□□□□ -1.31
DDX55-208ENST00000541259 K7EQM0 130 aa6.85□□□□□ -1.31
DDX55-208ENST00000541259 M0R2Z0 102 aa6.85□□□□□ -1.31
DDX55-208ENST00000541259 ZNF138P52744 262 aa6.85□□□□□ -1.31
DDX55-208ENST00000541259 UBE2G1P62253 170 aa6.85□□□□□ -1.31
DDX55-208ENST00000541259 PRR9Q5T870 116 aa6.85□□□□□ -1.31
DDX55-208ENST00000541259 Q86TA4 180 aa6.85□□□□□ -1.31
DDX55-208ENST00000541259 EIF4E3Q8N5X7 224 aaKnown RBP6.85□□□□□ -1.31
DDX55-208ENST00000541259 NHLRC2Q8NBF2 726 aa6.85□□□□□ -1.31
DDX55-208ENST00000541259 FMC1Q96HJ9 113 aa6.85□□□□□ -1.31
DDX55-208ENST00000541259 IGF2BP2-AS1Q96M15 143 aa6.85□□□□□ -1.31
DDX55-208ENST00000541259 PARLQ9H300 379 aa6.85□□□□□ -1.31
DDX55-208ENST00000541259 SMDT1Q9H4I9 107 aa6.85□□□□□ -1.31
DDX55-208ENST00000541259 TUBA4BQ9H853 241 aa6.85□□□□□ -1.31
DDX55-208ENST00000541259 HUWE1Q7Z6Z7 4374 aaKnown RBP6.85□□□□□ -1.31
DDX55-208ENST00000541259 TRAV12-2A0A075B6T6 113 aa6.84□□□□□ -1.31
DDX55-208ENST00000541259 TRBV6-1A0A0K0K1D8 114 aa6.84□□□□□ -1.31
DDX55-208ENST00000541259 NDUFS6O75380 124 aaKnown RBP6.84□□□□□ -1.31
DDX55-208ENST00000541259 LTAP01374 205 aa6.84□□□□□ -1.31
DDX55-208ENST00000541259 IGLV2-8P01709 118 aa6.84□□□□□ -1.31
DDX55-208ENST00000541259 GIG44P09565 113 aaPredicted RBP6.84□□□□□ -1.31
DDX55-208ENST00000541259 SFTA3P0C7M3 94 aa6.84□□□□□ -1.31
DDX55-208ENST00000541259 TAS2R60P59551 318 aa6.84□□□□□ -1.31
DDX55-208ENST00000541259 SPINK13Q1W4C9 94 aa6.84□□□□□ -1.31
DDX55-208ENST00000541259 CENPWQ5EE01 88 aa6.84□□□□□ -1.31
DDX55-208ENST00000541259 UQCC3Q6UW78 93 aa6.84□□□□□ -1.31
DDX55-208ENST00000541259 LINC00322Q6ZN03 302 aaPredicted RBP6.84□□□□□ -1.31
DDX55-208ENST00000541259 Q6ZQT7 251 aa6.84□□□□□ -1.31
DDX55-208ENST00000541259 CLUHP3Q96NS8 147 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms