RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 ZNF767PQ75MW2 155 aa9.34□□□□□ -0.91
LTBR-208ENST00000541005 RNASE8Q8TDE3 154 aaKnown RBP9.34□□□□□ -0.91
LTBR-208ENST00000541005 LINC01587Q99440 93 aa9.34□□□□□ -0.91
LTBR-208ENST00000541005 NIPSNAP3BQ9BS92 247 aa9.34□□□□□ -0.91
LTBR-208ENST00000541005 SH3BGRL3Q9H299 93 aa9.34□□□□□ -0.91
LTBR-208ENST00000541005 PLECQ15149 4684 aaKnown RBP9.34□□□□□ -0.91
LTBR-208ENST00000541005 DEFB131BA0A096LNP1 70 aa9.33□□□□□ -0.92
LTBR-208ENST00000541005 TAAR5O14804 337 aa9.33□□□□□ -0.92
LTBR-208ENST00000541005 ARPC5O15511 151 aa9.33□□□□□ -0.92
LTBR-208ENST00000541005 PRM2P04554 102 aa9.33□□□□□ -0.92
LTBR-208ENST00000541005 STAG3L2P0CL84 134 aa9.33□□□□□ -0.92
LTBR-208ENST00000541005 STAG3L3P0CL85 134 aa9.33□□□□□ -0.92
LTBR-208ENST00000541005 RANP62826 216 aaKnown RBP9.33□□□□□ -0.92
LTBR-208ENST00000541005 ZNF345Q14585 488 aa9.33□□□□□ -0.92
LTBR-208ENST00000541005 ZNF493Q6ZR52 646 aa9.33□□□□□ -0.92
LTBR-208ENST00000541005 ARL6IP6Q8N6S5 226 aa9.33□□□□□ -0.92
LTBR-208ENST00000541005 SUN5Q8TC36 379 aa9.33□□□□□ -0.92
LTBR-208ENST00000541005 TMEM263Q8WUH6 116 aaKnown RBP9.33□□□□□ -0.92
LTBR-208ENST00000541005 C16orf74Q96GX8 76 aa9.33□□□□□ -0.92
LTBR-208ENST00000541005 VGLL1Q99990 258 aa9.33□□□□□ -0.92
LTBR-208ENST00000541005 OTORQ9NRC9 128 aa9.33□□□□□ -0.92
LTBR-208ENST00000541005 APLNQ9ULZ1 77 aa9.33□□□□□ -0.92
LTBR-208ENST00000541005 MUC4Q99102 2169 aa9.33□□□□□ -0.92
LTBR-208ENST00000541005 C7orf71A4D174 169 aa9.32□□□□□ -0.92
LTBR-208ENST00000541005 EIF3GO75821 320 aaKnown RBP eCLIP9.32□□□□□ -0.92
LTBR-208ENST00000541005 ARL14EPLP0DKL9 152 aa9.32□□□□□ -0.92
LTBR-208ENST00000541005 AZU1P20160 251 aa9.32□□□□□ -0.92
LTBR-208ENST00000541005 CSN1S1P47710 185 aa9.32□□□□□ -0.92
LTBR-208ENST00000541005 TMEM78Q5T7P6 136 aa9.32□□□□□ -0.92
LTBR-208ENST00000541005 LGALS9CQ6DKI2 356 aa9.32□□□□□ -0.92
LTBR-208ENST00000541005 ZFAND2AQ8N6M9 145 aa9.32□□□□□ -0.92
LTBR-208ENST00000541005 RXFP4Q8TDU9 374 aa9.32□□□□□ -0.92
LTBR-208ENST00000541005 RAB24Q969Q5 203 aa9.32□□□□□ -0.92
LTBR-208ENST00000541005 PYGO2Q9BRQ0 406 aa9.32□□□□□ -0.92
LTBR-208ENST00000541005 ZNF492Q9P255 531 aa9.32□□□□□ -0.92
LTBR-208ENST00000541005 IGHV4-4A0A075B6R2 117 aa9.31□□□□□ -0.92
LTBR-208ENST00000541005 IGLL5B9A064 214 aa9.31□□□□□ -0.92
LTBR-208ENST00000541005 DIRC3C9JPN6 131 aa9.31□□□□□ -0.92
LTBR-208ENST00000541005 SMLR1H3BR10 107 aa9.31□□□□□ -0.92
LTBR-208ENST00000541005 ZNF138P52744 262 aa9.31□□□□□ -0.92
LTBR-208ENST00000541005 TMED6Q8WW62 240 aa9.31□□□□□ -0.92
LTBR-208ENST00000541005 FAM210BQ96KR6 192 aa9.31□□□□□ -0.92
LTBR-208ENST00000541005 LINC00467Q9BRT7 94 aa9.31□□□□□ -0.92
LTBR-208ENST00000541005 CYTL1Q9NRR1 136 aa9.31□□□□□ -0.92
LTBR-208ENST00000541005 RYR2Q92736 4967 aa9.31□□□□□ -0.92
LTBR-208ENST00000541005 TRAV12-3A0A0B4J271 114 aa9.3□□□□□ -0.92
LTBR-208ENST00000541005 HMSDA8MTL9 139 aa9.3□□□□□ -0.92
LTBR-208ENST00000541005 HMGB3O15347 200 aaKnown RBP9.3□□□□□ -0.92
LTBR-208ENST00000541005 ZNF324O75467 553 aaPredicted RBP9.3□□□□□ -0.92
LTBR-208ENST00000541005 LY6G6CO95867 125 aa9.3□□□□□ -0.92
LTBR-208ENST00000541005 DAD1P61803 113 aa9.3□□□□□ -0.92
LTBR-208ENST00000541005 FAM74A1Q5RGS3 127 aa9.3□□□□□ -0.92
LTBR-208ENST00000541005 ACTR3CQ9C0K3 210 aaPredicted RBP9.3□□□□□ -0.92
LTBR-208ENST00000541005 TIMM8BQ9Y5J9 83 aaPredicted RBP9.3□□□□□ -0.92
LTBR-208ENST00000541005 LENEPQ9Y5L5 61 aa9.3□□□□□ -0.92
LTBR-208ENST00000541005 NACAE9PAV3 2078 aa9.3□□□□□ -0.92
LTBR-208ENST00000541005 J3KRW8 73 aa9.29□□□□□ -0.92
LTBR-208ENST00000541005 CXorf1O96002 111 aa9.29□□□□□ -0.92
LTBR-208ENST00000541005 GCHFRP30047 84 aa9.29□□□□□ -0.92
LTBR-208ENST00000541005 CD300CQ08708 224 aa9.29□□□□□ -0.92
LTBR-208ENST00000541005 BTN1A1Q13410 526 aa9.29□□□□□ -0.92
LTBR-208ENST00000541005 PRR9Q5T870 116 aa9.29□□□□□ -0.92
LTBR-208ENST00000541005 KCNRGQ8N5I3 272 aa9.29□□□□□ -0.92
LTBR-208ENST00000541005 LINC00612Q8N6U2 182 aa9.29□□□□□ -0.92
LTBR-208ENST00000541005 OR11H4Q8NGC9 324 aa9.29□□□□□ -0.92
LTBR-208ENST00000541005 Q8TAT8 98 aa9.29□□□□□ -0.92
LTBR-208ENST00000541005 CMTM2Q8TAZ6 248 aa9.29□□□□□ -0.92
LTBR-208ENST00000541005 CTXND1A0A1B0GTU2 59 aa9.28□□□□□ -0.92
LTBR-208ENST00000541005 PGPA6NDG6 321 aa9.28□□□□□ -0.92
LTBR-208ENST00000541005 GPX1P07203 203 aa9.28□□□□□ -0.92
LTBR-208ENST00000541005 HTN1P15515 57 aa9.28□□□□□ -0.92
LTBR-208ENST00000541005 SSX7Q7RTT5 188 aa9.28□□□□□ -0.92
LTBR-208ENST00000541005 CCDC28AQ8IWP9 274 aa9.28□□□□□ -0.92
LTBR-208ENST00000541005 ZNF680Q8NEM1 530 aa9.28□□□□□ -0.92
LTBR-208ENST00000541005 ST6GAL2Q96JF0 529 aa9.28□□□□□ -0.92
LTBR-208ENST00000541005 ARPC5LQ9BPX5 153 aa9.28□□□□□ -0.92
LTBR-208ENST00000541005 NDUFAF3Q9BU61 184 aa9.28□□□□□ -0.92
LTBR-208ENST00000541005 TMEM167BQ9NRX6 74 aa9.28□□□□□ -0.92
LTBR-208ENST00000541005 PLA2G2EQ9NZK7 142 aa9.28□□□□□ -0.92
LTBR-208ENST00000541005 A0A0D9SG52 128 aa9.27□□□□□ -0.93
LTBR-208ENST00000541005 SERTM2A0A1B0GWG4 89 aa9.27□□□□□ -0.93
LTBR-208ENST00000541005 RNASE4P34096 147 aaKnown RBP9.27□□□□□ -0.93
LTBR-208ENST00000541005 DAZ2Q13117 558 aaKnown RBP9.27□□□□□ -0.93
LTBR-208ENST00000541005 ZNF726P1Q15940 193 aa9.27□□□□□ -0.93
LTBR-208ENST00000541005 ANXA2RQ3ZCQ2 193 aa9.27□□□□□ -0.93
LTBR-208ENST00000541005 C5orf17Q8NAS9 161 aa9.27□□□□□ -0.93
LTBR-208ENST00000541005 C11orf72Q8NBR9 251 aa9.27□□□□□ -0.93
LTBR-208ENST00000541005 HYLS1Q96M11 299 aa9.27□□□□□ -0.93
LTBR-208ENST00000541005 DEFB130BP0DP73 79 aa9.26□□□□□ -0.93
LTBR-208ENST00000541005 DEFB130AP0DP74 79 aa9.26□□□□□ -0.93
LTBR-208ENST00000541005 AKR1C8PQ5T2L2 129 aa9.26□□□□□ -0.93
LTBR-208ENST00000541005 Q6AWC8 147 aa9.26□□□□□ -0.93
LTBR-208ENST00000541005 GOLT1AQ6ZVE7 132 aa9.26□□□□□ -0.93
LTBR-208ENST00000541005 EIF4E3Q8N5X7 224 aaKnown RBP9.26□□□□□ -0.93
LTBR-208ENST00000541005 NOP10Q9NPE3 64 aaKnown RBP9.26□□□□□ -0.93
LTBR-208ENST00000541005 A0A1W2PRE2 83 aa9.25□□□□□ -0.93
LTBR-208ENST00000541005 CBY3A6NI87 242 aa9.25□□□□□ -0.93
LTBR-208ENST00000541005 SNURFLB1AK76 121 aa9.25□□□□□ -0.93
LTBR-208ENST00000541005 GGTLC3B5MD39 225 aa9.25□□□□□ -0.93
LTBR-208ENST00000541005 BCL2L11O43521 198 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms