RNA–Protein interactions for RNA: ENST00000540990.5

CACNB3-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,814 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-203ENST00000540990 IGFL4Q6B9Z1 124 aa12.97□□□□□ -0.33
CACNB3-203ENST00000540990 HIF1ANQ9NWT6 349 aa12.97□□□□□ -0.33
CACNB3-203ENST00000540990 CENPVL3A0A0U1RRI6 287 aa12.96□□□□□ -0.33
CACNB3-203ENST00000540990 PRAC2D3DTV9 90 aa12.96□□□□□ -0.33
CACNB3-203ENST00000540990 LMO4P61968 165 aa12.96□□□□□ -0.33
CACNB3-203ENST00000540990 TRBV7-1A0A0A6YYK4 115 aa12.95□□□□□ -0.34
CACNB3-203ENST00000540990 H0Y8G0 127 aa12.95□□□□□ -0.34
CACNB3-203ENST00000540990 NDUFS7O75251 213 aa12.95□□□□□ -0.34
CACNB3-203ENST00000540990 SFTPCP11686 197 aa12.95□□□□□ -0.34
CACNB3-203ENST00000540990 SAA4P35542 130 aa12.95□□□□□ -0.34
CACNB3-203ENST00000540990 PIFOQ8TCI5 191 aa12.95□□□□□ -0.34
CACNB3-203ENST00000540990 KALRNO60229 2985 aa12.95□□□□□ -0.34
CACNB3-203ENST00000540990 ABCA4P78363 2273 aa12.95□□□□□ -0.34
CACNB3-203ENST00000540990 MUC21A0A0G2JKD1 596 aa12.95□□□□□ -0.34
CACNB3-203ENST00000540990 MUC21A0A140T8X8 626 aa12.95□□□□□ -0.34
CACNB3-203ENST00000540990 CRIP2P52943 208 aaPredicted RBP12.95□□□□□ -0.34
CACNB3-203ENST00000540990 ECSCRQ19T08 205 aa12.95□□□□□ -0.34
CACNB3-203ENST00000540990 ANKRD39Q53RE8 183 aa12.95□□□□□ -0.34
CACNB3-203ENST00000540990 C19orf54Q5BKX5 351 aa12.95□□□□□ -0.34
CACNB3-203ENST00000540990 MUC21Q5SSG8 566 aa12.95□□□□□ -0.34
CACNB3-203ENST00000540990 OR8A1Q8NGG7 326 aa12.95□□□□□ -0.34
CACNB3-203ENST00000540990 EEF1AKMT3Q96AZ1 226 aa12.95□□□□□ -0.34
CACNB3-203ENST00000540990 IFI27L1Q96BM0 104 aa12.95□□□□□ -0.34
CACNB3-203ENST00000540990 TRAV8-2A0A0B4J237 113 aa12.94□□□□□ -0.34
CACNB3-203ENST00000540990 ORM1P02763 201 aa12.94□□□□□ -0.34
CACNB3-203ENST00000540990 ERCC8Q13216 396 aa12.94□□□□□ -0.34
CACNB3-203ENST00000540990 PSMG4Q5JS54 123 aa12.94□□□□□ -0.34
CACNB3-203ENST00000540990 BOD1L2Q8IYS8 172 aa12.94□□□□□ -0.34
CACNB3-203ENST00000540990 MAP1LC3AQ9H492 121 aa12.94□□□□□ -0.34
CACNB3-203ENST00000540990 TIMM8BQ9Y5J9 83 aaPredicted RBP12.94□□□□□ -0.34
CACNB3-203ENST00000540990 SIVA1O15304 175 aa12.93□□□□□ -0.34
CACNB3-203ENST00000540990 SEC11AP67812 179 aa12.93□□□□□ -0.34
CACNB3-203ENST00000540990 NXT2Q9NPJ8 142 aaKnown RBP12.93□□□□□ -0.34
CACNB3-203ENST00000540990 CBY1Q9Y3M2 126 aa12.93□□□□□ -0.34
CACNB3-203ENST00000540990 DMXL2Q8TDJ6 3036 aa12.93□□□□□ -0.34
CACNB3-203ENST00000540990 PRSS47A8MTI9 375 aa12.92□□□□□ -0.34
CACNB3-203ENST00000540990 SMKR1H3BMG3 65 aa12.92□□□□□ -0.34
CACNB3-203ENST00000540990 NPFFO15130 113 aa12.92□□□□□ -0.34
CACNB3-203ENST00000540990 C5orf56Q8N8D9 126 aa12.92□□□□□ -0.34
CACNB3-203ENST00000540990 AGPAT4-IT1Q9H0P7 198 aa12.92□□□□□ -0.34
CACNB3-203ENST00000540990 MSRB1Q9NZV6 116 aa12.92□□□□□ -0.34
CACNB3-203ENST00000540990 IGKV3D-20A0A0C4DH25 116 aa12.92□□□□□ -0.34
CACNB3-203ENST00000540990 CACNG7P62955 275 aa12.92□□□□□ -0.34
CACNB3-203ENST00000540990 PRSS57Q6UWY2 283 aa12.92□□□□□ -0.34
CACNB3-203ENST00000540990 CLEC19AQ6UXS0 136 aa12.92□□□□□ -0.34
CACNB3-203ENST00000540990 C9orf47Q6ZRZ4 202 aa12.92□□□□□ -0.34
CACNB3-203ENST00000540990 TPRP12270 2363 aaKnown RBP12.91□□□□□ -0.34
CACNB3-203ENST00000540990 IGHV4-4A0A075B6R2 117 aa12.91□□□□□ -0.34
CACNB3-203ENST00000540990 IGHV3OR16-8A0A075B7F1 116 aa12.91□□□□□ -0.34
CACNB3-203ENST00000540990 IGHV3-35A0A0C4DH35 117 aa12.91□□□□□ -0.34
CACNB3-203ENST00000540990 FCER1GP30273 86 aa12.91□□□□□ -0.34
CACNB3-203ENST00000540990 IL17RELQ6ZVW7 336 aa12.91□□□□□ -0.34
CACNB3-203ENST00000540990 OR9G4Q8NGQ1 327 aa12.91□□□□□ -0.34
CACNB3-203ENST00000540990 METTL26Q96S19 204 aa12.91□□□□□ -0.34
CACNB3-203ENST00000540990 G3V318 75 aa12.9□□□□□ -0.34
CACNB3-203ENST00000540990 TMEM97Q5BJF2 176 aa12.9□□□□□ -0.34
CACNB3-203ENST00000540990 RNF182Q8N6D2 247 aa12.9□□□□□ -0.34
CACNB3-203ENST00000540990 ZMAT4Q9H898 229 aa12.9□□□□□ -0.34
CACNB3-203ENST00000540990 PTPRZ1P23471 2315 aaPredicted RBP12.9□□□□□ -0.34
CACNB3-203ENST00000540990 LINC01548A6NM66 108 aa12.9□□□□□ -0.34
CACNB3-203ENST00000540990 SMAD7O15105 426 aaKnown RBP12.9□□□□□ -0.34
CACNB3-203ENST00000540990 TNFRSF6BO95407 300 aa12.9□□□□□ -0.34
CACNB3-203ENST00000540990 FOXE3Q13461 319 aa12.9□□□□□ -0.34
CACNB3-203ENST00000540990 VAMP3Q15836 100 aa12.9□□□□□ -0.34
CACNB3-203ENST00000540990 C11orf21Q9P2W6 132 aa12.9□□□□□ -0.34
CACNB3-203ENST00000540990 IGLV2-18A0A075B6J9 118 aa12.89□□□□□ -0.35
CACNB3-203ENST00000540990 FAM223BA6NKX1 122 aa12.89□□□□□ -0.35
CACNB3-203ENST00000540990 C8orf86Q6ZUL3 223 aa12.89□□□□□ -0.35
CACNB3-203ENST00000540990 FAM223AQ8IWN6 122 aa12.89□□□□□ -0.35
CACNB3-203ENST00000540990 BPESC1Q9GZL8 116 aa12.89□□□□□ -0.35
CACNB3-203ENST00000540990 UBTD1Q9HAC8 227 aa12.89□□□□□ -0.35
CACNB3-203ENST00000540990 LENEPQ9Y5L5 61 aa12.89□□□□□ -0.35
CACNB3-203ENST00000540990 IGHV7-4-1A0A0J9YVY3 117 aa12.88□□□□□ -0.35
CACNB3-203ENST00000540990 SNAI2O43623 268 aa12.88□□□□□ -0.35
CACNB3-203ENST00000540990 BRI3O95415 125 aa12.88□□□□□ -0.35
CACNB3-203ENST00000540990 ATP5G2Q06055 141 aa12.88□□□□□ -0.35
CACNB3-203ENST00000540990 Q8N8P6 123 aa12.88□□□□□ -0.35
CACNB3-203ENST00000540990 TMEM78Q5T7P6 136 aa12.88□□□□□ -0.35
CACNB3-203ENST00000540990 OR4C5Q8NGB2 326 aa12.88□□□□□ -0.35
CACNB3-203ENST00000540990 GLMPQ8WWB7 406 aa12.88□□□□□ -0.35
CACNB3-203ENST00000540990 MOB4Q9Y3A3 225 aa12.88□□□□□ -0.35
CACNB3-203ENST00000540990 GAS8-AS1O95177 125 aa12.87□□□□□ -0.35
CACNB3-203ENST00000540990 OR4X2Q8NGF9 303 aa12.87□□□□□ -0.35
CACNB3-203ENST00000540990 ITLN2Q8WWU7 325 aaPredicted RBP12.87□□□□□ -0.35
CACNB3-203ENST00000540990 PEF1Q9UBV8 284 aaKnown RBP12.87□□□□□ -0.35
CACNB3-203ENST00000540990 FXYD7P58549 80 aa12.86□□□□□ -0.35
CACNB3-203ENST00000540990 HSD52Q0P140 79 aa12.86□□□□□ -0.35
CACNB3-203ENST00000540990 ADAMTSL5Q6ZMM2 481 aa12.86□□□□□ -0.35
CACNB3-203ENST00000540990 RNASE8Q8TDE3 154 aaKnown RBP12.86□□□□□ -0.35
CACNB3-203ENST00000540990 SPTBN2O15020 2390 aa12.86□□□□□ -0.35
CACNB3-203ENST00000540990 TRAV41A0A0B4J266 112 aa12.85□□□□□ -0.35
CACNB3-203ENST00000540990 IGHV3-66A0A0C4DH42 116 aa12.85□□□□□ -0.35
CACNB3-203ENST00000540990 LEPP41159 167 aa12.85□□□□□ -0.35
CACNB3-203ENST00000540990 ODF1Q14990 250 aa12.85□□□□□ -0.35
CACNB3-203ENST00000540990 C9orf139Q6ZV77 190 aa12.85□□□□□ -0.35
CACNB3-203ENST00000540990 A1L4Q6 167 aa12.85□□□□□ -0.35
CACNB3-203ENST00000540990 CBY3A6NI87 242 aa12.85□□□□□ -0.35
CACNB3-203ENST00000540990 RBX1P62877 108 aa12.85□□□□□ -0.35
CACNB3-203ENST00000540990 KIR3DS1Q14943 382 aa12.85□□□□□ -0.35
CACNB3-203ENST00000540990 OR2K2Q8NGT1 345 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms