RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 ANXA2RQ3ZCQ2 193 aa18.26■□□□□ 0.51
CHFR-218ENST00000540963 GSN-AS1Q9NRJ2 163 aa18.26■□□□□ 0.51
CHFR-218ENST00000540963 SRRM2Q9UQ35 2752 aaKnown RBP18.25■□□□□ 0.51
CHFR-218ENST00000540963 FLG2Q5D862 2391 aaPredicted RBP18.25■□□□□ 0.51
CHFR-218ENST00000540963 C5orf51A6NDU8 294 aa18.25■□□□□ 0.51
CHFR-218ENST00000540963 H3BTX0 84 aa18.25■□□□□ 0.51
CHFR-218ENST00000540963 PAX4O43316 350 aa18.25■□□□□ 0.51
CHFR-218ENST00000540963 SLAQ13239 276 aa18.25■□□□□ 0.51
CHFR-218ENST00000540963 OPCMLQ14982 345 aa18.25■□□□□ 0.51
CHFR-218ENST00000540963 TRGV1A0A0A0MS02 117 aa18.24■□□□□ 0.51
CHFR-218ENST00000540963 IGSF23A1L1A6 192 aa18.24■□□□□ 0.51
CHFR-218ENST00000540963 C7orf71A4D174 169 aa18.24■□□□□ 0.51
CHFR-218ENST00000540963 H3BQ15 152 aa18.24■□□□□ 0.51
CHFR-218ENST00000540963 ZNF846Q147U1 533 aa18.24■□□□□ 0.51
CHFR-218ENST00000540963 VWC2Q2TAL6 325 aa18.24■□□□□ 0.51
CHFR-218ENST00000540963 C10orf113Q5VZT2 155 aa18.24■□□□□ 0.51
CHFR-218ENST00000540963 MIC13Q5XKP0 118 aa18.24■□□□□ 0.51
CHFR-218ENST00000540963 MRPL53Q96EL3 112 aaKnown RBP18.24■□□□□ 0.51
CHFR-218ENST00000540963 PRO0255Q9UI72 69 aa18.24■□□□□ 0.51
CHFR-218ENST00000540963 WDR83OSQ9Y284 106 aa18.24■□□□□ 0.51
CHFR-218ENST00000540963 TRAV5A0A0B4J249 113 aa18.23■□□□□ 0.51
CHFR-218ENST00000540963 L7N2F9 121 aa18.23■□□□□ 0.51
CHFR-218ENST00000540963 SPINK4O60575 86 aa18.23■□□□□ 0.51
CHFR-218ENST00000540963 ZNF253O75346 499 aa18.23■□□□□ 0.51
CHFR-218ENST00000540963 VAMP2P63027 116 aa18.23■□□□□ 0.51
CHFR-218ENST00000540963 RAB32Q13637 225 aa18.23■□□□□ 0.51
CHFR-218ENST00000540963 NRARPQ7Z6K4 114 aa18.23■□□□□ 0.51
CHFR-218ENST00000540963 EIF4E3Q8N5X7 224 aaKnown RBP18.23■□□□□ 0.51
CHFR-218ENST00000540963 ST6GAL2Q96JF0 529 aa18.23■□□□□ 0.51
CHFR-218ENST00000540963 KLLNB2CW77 178 aa18.22■□□□□ 0.51
CHFR-218ENST00000540963 CAMLGP49069 296 aa18.22■□□□□ 0.51
CHFR-218ENST00000540963 BCAP31P51572 246 aa18.22■□□□□ 0.51
CHFR-218ENST00000540963 CAV2P51636 162 aa18.22■□□□□ 0.51
CHFR-218ENST00000540963 TCL1AP56279 114 aa18.22■□□□□ 0.51
CHFR-218ENST00000540963 IFITM3Q01628 133 aa18.22■□□□□ 0.51
CHFR-218ENST00000540963 IBA57Q5T440 356 aaKnown RBP18.22■□□□□ 0.51
CHFR-218ENST00000540963 TMEM252Q8N6L7 170 aa18.22■□□□□ 0.51
CHFR-218ENST00000540963 TNFRSF18Q9Y5U5 241 aa18.22■□□□□ 0.51
CHFR-218ENST00000540963 FAM229AH3BQW9 127 aa18.21■□□□□ 0.51
CHFR-218ENST00000540963 DNAH10OSP0CZ25 163 aa18.21■□□□□ 0.51
CHFR-218ENST00000540963 ASAH1Q13510 395 aa18.21■□□□□ 0.51
CHFR-218ENST00000540963 MRPL23Q16540 153 aaKnown RBP18.21■□□□□ 0.51
CHFR-218ENST00000540963 LYPD5Q6UWN5 251 aa18.21■□□□□ 0.51
CHFR-218ENST00000540963 LINC00299Q6ZSB3 139 aa18.21■□□□□ 0.51
CHFR-218ENST00000540963 LYRM2Q9NU23 88 aaPredicted RBP18.21■□□□□ 0.51
CHFR-218ENST00000540963 FAM240BA0A1B0GVZ2 78 aa18.2■□□□□ 0.5
CHFR-218ENST00000540963 GCSHP23434 173 aa18.2■□□□□ 0.5
CHFR-218ENST00000540963 DNAJC4Q9NNZ3 241 aa18.2■□□□□ 0.5
CHFR-218ENST00000540963 LY96Q9Y6Y9 160 aa18.2■□□□□ 0.5
CHFR-218ENST00000540963 Q6ZRG5 221 aa18.19■□□□□ 0.5
CHFR-218ENST00000540963 FAM19A4Q96LR4 140 aa18.19■□□□□ 0.5
CHFR-218ENST00000540963 LINC00477Q96M19 166 aa18.19■□□□□ 0.5
CHFR-218ENST00000540963 SULT1A1P50225 295 aa18.18■□□□□ 0.5
CHFR-218ENST00000540963 CRYBA4P53673 196 aa18.18■□□□□ 0.5
CHFR-218ENST00000540963 NEGR1Q7Z3B1 354 aa18.18■□□□□ 0.5
CHFR-218ENST00000540963 VGLL1Q99990 258 aa18.18■□□□□ 0.5
CHFR-218ENST00000540963 UQCC1Q9NVA1 299 aa18.18■□□□□ 0.5
CHFR-218ENST00000540963 MSRB1Q9NZV6 116 aa18.18■□□□□ 0.5
CHFR-218ENST00000540963 KLF12Q9Y4X4 402 aa18.18■□□□□ 0.5
CHFR-218ENST00000540963 A6NHS1 94 aa18.17■□□□□ 0.5
CHFR-218ENST00000540963 NMBP08949 121 aa18.17■□□□□ 0.5
CHFR-218ENST00000540963 S100A10P60903 97 aa18.17■□□□□ 0.5
CHFR-218ENST00000540963 RAB31Q13636 194 aa18.17■□□□□ 0.5
CHFR-218ENST00000540963 CHAC2Q8WUX2 184 aa18.17■□□□□ 0.5
CHFR-218ENST00000540963 HHLA3Q9XRX5 114 aa18.17■□□□□ 0.5
CHFR-218ENST00000540963 PRELID1Q9Y255 219 aa18.17■□□□□ 0.5
CHFR-218ENST00000540963 MPDU1O75352 247 aa18.16■□□□□ 0.5
CHFR-218ENST00000540963 SIX6O95475 246 aa18.16■□□□□ 0.5
CHFR-218ENST00000540963 SMR3BP02814 79 aaPredicted RBP18.16■□□□□ 0.5
CHFR-218ENST00000540963 RPL29P47914 159 aaKnown RBP18.16■□□□□ 0.5
CHFR-218ENST00000540963 OR1L4Q8NGR5 311 aa18.16■□□□□ 0.5
CHFR-218ENST00000540963 CRISP2P16562 243 aa18.15■□□□□ 0.5
CHFR-218ENST00000540963 CD300CQ08708 224 aa18.15■□□□□ 0.5
CHFR-218ENST00000540963 Q6ZSN1 163 aa18.15■□□□□ 0.5
CHFR-218ENST00000540963 PFDN5Q99471 154 aa18.15■□□□□ 0.5
CHFR-218ENST00000540963 TMEM70Q9BUB7 260 aa18.15■□□□□ 0.5
CHFR-218ENST00000540963 SLC39A9Q9NUM3 307 aa18.15■□□□□ 0.5
CHFR-218ENST00000540963 UBE2L5PA0A1B0GUS4 154 aa18.14■□□□□ 0.49
CHFR-218ENST00000540963 H0YIZ8 118 aa18.14■□□□□ 0.49
CHFR-218ENST00000540963 EVI2AP22794 236 aa18.14■□□□□ 0.49
CHFR-218ENST00000540963 S100A11P31949 105 aa18.14■□□□□ 0.49
CHFR-218ENST00000540963 BTN1A1Q13410 526 aa18.14■□□□□ 0.49
CHFR-218ENST00000540963 FHL2Q14192 279 aa18.14■□□□□ 0.49
CHFR-218ENST00000540963 MDFICQ9P1T7 246 aa18.14■□□□□ 0.49
CHFR-218ENST00000540963 TRBV19A0A075B6N1 114 aa18.13■□□□□ 0.49
CHFR-218ENST00000540963 GCSAMLQ5JQS6 135 aa18.13■□□□□ 0.49
CHFR-218ENST00000540963 MZT2BQ6NZ67 158 aa18.13■□□□□ 0.49
CHFR-218ENST00000540963 S100ZQ8WXG8 99 aa18.13■□□□□ 0.49
CHFR-218ENST00000540963 M0R3E3 92 aa18.12■□□□□ 0.49
CHFR-218ENST00000540963 PRAF2O60831 178 aa18.12■□□□□ 0.49
CHFR-218ENST00000540963 UPK1BO75841 260 aa18.12■□□□□ 0.49
CHFR-218ENST00000540963 PVALBP20472 110 aaPredicted RBP18.12■□□□□ 0.49
CHFR-218ENST00000540963 RNASE4P34096 147 aaKnown RBP18.12■□□□□ 0.49
CHFR-218ENST00000540963 NHLH2Q02577 135 aa18.12■□□□□ 0.49
CHFR-218ENST00000540963 ERCC8Q13216 396 aa18.12■□□□□ 0.49
CHFR-218ENST00000540963 PDE6HQ13956 83 aa18.12■□□□□ 0.49
CHFR-218ENST00000540963 C9orf47Q6ZRZ4 202 aa18.12■□□□□ 0.49
CHFR-218ENST00000540963 MRPL32Q9BYC8 188 aaKnown RBP18.12■□□□□ 0.49
CHFR-218ENST00000540963 AGPAT4-IT1Q9H0P7 198 aa18.12■□□□□ 0.49
CHFR-218ENST00000540963 TMEM14CQ9P0S9 112 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms