RNA–Protein interactions for RNA: ENST00000540803.1

RAB35-204, Transcript of RAB35, member RAS oncogene family, human

TSL 2

Gene RAB35, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB35-204	ENST00000540803	FAM231A	P0DMU4	169 aa		13.52	□□□□□ -0.25
RAB35-204	ENST00000540803	FAM231C	P0DMU5	169 aa		13.52	□□□□□ -0.25
RAB35-204	ENST00000540803	UBE2L3	P68036	154 aa	Known RBP	13.52	□□□□□ -0.25
RAB35-204	ENST00000540803	KHDC3L	Q587J8	217 aa		13.52	□□□□□ -0.25
RAB35-204	ENST00000540803		Q5BKY6	102 aa		13.52	□□□□□ -0.25
RAB35-204	ENST00000540803	TMEM88	Q6PEY1	159 aa		13.52	□□□□□ -0.25
RAB35-204	ENST00000540803	AQP10	Q96PS8	301 aa		13.52	□□□□□ -0.25
RAB35-204	ENST00000540803	VGLL1	Q99990	258 aa		13.52	□□□□□ -0.25
RAB35-204	ENST00000540803	GIP	P09681	153 aa	Predicted RBP	13.51	□□□□□ -0.25
RAB35-204	ENST00000540803	NOP10	Q9NPE3	64 aa	Known RBP	13.51	□□□□□ -0.25
RAB35-204	ENST00000540803	FAT2	Q9NYQ8	4349 aa		13.5	□□□□□ -0.25
RAB35-204	ENST00000540803	C7orf71	A4D174	169 aa		13.5	□□□□□ -0.25
RAB35-204	ENST00000540803	CRISP2	P16562	243 aa		13.5	□□□□□ -0.25
RAB35-204	ENST00000540803	M6PR	P20645	277 aa		13.5	□□□□□ -0.25
RAB35-204	ENST00000540803	TAS2R45	P59539	299 aa		13.5	□□□□□ -0.25
RAB35-204	ENST00000540803	RAN	P62826	216 aa	Known RBP	13.5	□□□□□ -0.25
RAB35-204	ENST00000540803	CD300C	Q08708	224 aa		13.5	□□□□□ -0.25
RAB35-204	ENST00000540803	BTN1A1	Q13410	526 aa		13.5	□□□□□ -0.25
RAB35-204	ENST00000540803	ACOT6	Q3I5F7	207 aa	Predicted RBP	13.5	□□□□□ -0.25
RAB35-204	ENST00000540803	CCDC28A	Q8IWP9	274 aa		13.5	□□□□□ -0.25
RAB35-204	ENST00000540803	LYPD1	Q8N2G4	141 aa		13.5	□□□□□ -0.25
RAB35-204	ENST00000540803	POM121L12	Q8N7R1	296 aa		13.5	□□□□□ -0.25
RAB35-204	ENST00000540803	ASB13	Q8WXK3	278 aa		13.5	□□□□□ -0.25
RAB35-204	ENST00000540803	PYGO2	Q9BRQ0	406 aa		13.5	□□□□□ -0.25
RAB35-204	ENST00000540803		Q9H3A6	140 aa		13.5	□□□□□ -0.25
RAB35-204	ENST00000540803	DNAH17	Q9UFH2	4485 aa		13.49	□□□□□ -0.25
RAB35-204	ENST00000540803	ZNF324	O75467	553 aa	Predicted RBP	13.49	□□□□□ -0.25
RAB35-204	ENST00000540803	RAB2A	P61019	212 aa		13.49	□□□□□ -0.25
RAB35-204	ENST00000540803	ZNF266	Q14584	549 aa		13.49	□□□□□ -0.25
RAB35-204	ENST00000540803	TMEM78	Q5T7P6	136 aa		13.49	□□□□□ -0.25
RAB35-204	ENST00000540803	ZNF492	Q9P255	531 aa		13.49	□□□□□ -0.25
RAB35-204	ENST00000540803	CBY3	A6NI87	242 aa		13.48	□□□□□ -0.25
RAB35-204	ENST00000540803	RGS21	Q2M5E4	152 aa		13.48	□□□□□ -0.25
RAB35-204	ENST00000540803	PRR9	Q5T870	116 aa		13.48	□□□□□ -0.25
RAB35-204	ENST00000540803	ZFAND2A	Q8N6M9	145 aa		13.48	□□□□□ -0.25
RAB35-204	ENST00000540803	LINC00612	Q8N6U2	182 aa		13.48	□□□□□ -0.25
RAB35-204	ENST00000540803		F5H768	121 aa		13.47	□□□□□ -0.25
RAB35-204	ENST00000540803	ATP5G1	P05496	136 aa		13.47	□□□□□ -0.25
RAB35-204	ENST00000540803	NMB	P08949	121 aa		13.47	□□□□□ -0.25
RAB35-204	ENST00000540803	RNASE4	P34096	147 aa	Known RBP	13.47	□□□□□ -0.25
RAB35-204	ENST00000540803	ATP5G3	P48201	142 aa		13.47	□□□□□ -0.25
RAB35-204	ENST00000540803	HSD17B11	Q8NBQ5	300 aa		13.47	□□□□□ -0.25
RAB35-204	ENST00000540803	OR2G3	Q8NGZ4	309 aa		13.47	□□□□□ -0.25
RAB35-204	ENST00000540803	NACA	E9PAV3	2078 aa		13.47	□□□□□ -0.25
RAB35-204	ENST00000540803	HECTD4	Q9Y4D8	3996 aa		13.47	□□□□□ -0.25
RAB35-204	ENST00000540803		A0A1W2PPV4	95 aa		13.46	□□□□□ -0.25
RAB35-204	ENST00000540803	SNURFL	B1AK76	121 aa		13.46	□□□□□ -0.25
RAB35-204	ENST00000540803	GPX1	P07203	203 aa		13.46	□□□□□ -0.25
RAB35-204	ENST00000540803	CSN1S1	P47710	185 aa		13.46	□□□□□ -0.25
RAB35-204	ENST00000540803	ZNF138	P52744	262 aa		13.46	□□□□□ -0.25
RAB35-204	ENST00000540803	PQLC2	Q6ZP29	291 aa		13.46	□□□□□ -0.25
RAB35-204	ENST00000540803	C15orf53	Q8NAA6	179 aa		13.46	□□□□□ -0.25
RAB35-204	ENST00000540803	OR10G4	Q8NGN3	311 aa		13.46	□□□□□ -0.25
RAB35-204	ENST00000540803	OR10G9	Q8NGN4	311 aa		13.46	□□□□□ -0.25
RAB35-204	ENST00000540803	OR10G7	Q8NGN6	311 aa		13.46	□□□□□ -0.25
RAB35-204	ENST00000540803		Q8TAT8	98 aa		13.46	□□□□□ -0.25
RAB35-204	ENST00000540803	LINC00467	Q9BRT7	94 aa		13.46	□□□□□ -0.25
RAB35-204	ENST00000540803	RBAKDN	A6NC62	111 aa		13.45	□□□□□ -0.26
RAB35-204	ENST00000540803	RNF222	A6NCQ9	220 aa		13.45	□□□□□ -0.26
RAB35-204	ENST00000540803	DIRC3	C9JPN6	131 aa		13.45	□□□□□ -0.26
RAB35-204	ENST00000540803	HMGB3	O15347	200 aa	Known RBP	13.45	□□□□□ -0.26
RAB35-204	ENST00000540803	ATP6V0C	P27449	155 aa		13.45	□□□□□ -0.26
RAB35-204	ENST00000540803		Q6ZQT7	251 aa		13.45	□□□□□ -0.26
RAB35-204	ENST00000540803	C11orf72	Q8NBR9	251 aa		13.45	□□□□□ -0.26
RAB35-204	ENST00000540803	PSMG3	Q9BT73	122 aa	Predicted RBP	13.45	□□□□□ -0.26
RAB35-204	ENST00000540803	TRBV7-9	A0A0J9YWB2	115 aa		13.44	□□□□□ -0.26
RAB35-204	ENST00000540803	UBE2DNL	Q8IWF7	75 aa		13.44	□□□□□ -0.26
RAB35-204	ENST00000540803	EIF4E3	Q8N5X7	224 aa	Known RBP	13.44	□□□□□ -0.26
RAB35-204	ENST00000540803	INO80E	Q8NBZ0	244 aa	Predicted RBP	13.44	□□□□□ -0.26
RAB35-204	ENST00000540803	ZNF680	Q8NEM1	530 aa		13.44	□□□□□ -0.26
RAB35-204	ENST00000540803	OR2T35	Q8NGX2	323 aa		13.44	□□□□□ -0.26
RAB35-204	ENST00000540803	OTOR	Q9NRC9	128 aa		13.44	□□□□□ -0.26
RAB35-204	ENST00000540803	FXYD6-FXYD2	A0A087WZ82	144 aa		13.43	□□□□□ -0.26
RAB35-204	ENST00000540803	GAGE12B	A1L429	117 aa		13.43	□□□□□ -0.26
RAB35-204	ENST00000540803		G3V3Q6	166 aa		13.43	□□□□□ -0.26
RAB35-204	ENST00000540803	GAGE7	O76087	117 aa		13.43	□□□□□ -0.26
RAB35-204	ENST00000540803	GAGE12F	P0CL80	117 aa		13.43	□□□□□ -0.26
RAB35-204	ENST00000540803	GAGE12G	P0CL81	117 aa		13.43	□□□□□ -0.26
RAB35-204	ENST00000540803	GAGE12I	P0CL82	117 aa		13.43	□□□□□ -0.26
RAB35-204	ENST00000540803	CDC34	P49427	236 aa	Predicted RBP	13.43	□□□□□ -0.26
RAB35-204	ENST00000540803	DAZ2	Q13117	558 aa	Known RBP	13.43	□□□□□ -0.26
RAB35-204	ENST00000540803	ANXA2R	Q3ZCQ2	193 aa		13.43	□□□□□ -0.26
RAB35-204	ENST00000540803	RXFP4	Q8TDU9	374 aa		13.43	□□□□□ -0.26
RAB35-204	ENST00000540803	HYLS1	Q96M11	299 aa		13.43	□□□□□ -0.26
RAB35-204	ENST00000540803	SH3BGRL3	Q9H299	93 aa		13.43	□□□□□ -0.26
RAB35-204	ENST00000540803	GSN-AS1	Q9NRJ2	163 aa		13.43	□□□□□ -0.26
RAB35-204	ENST00000540803	TNFSF18	Q9UNG2	199 aa		13.43	□□□□□ -0.26
RAB35-204	ENST00000540803	PGP	A6NDG6	321 aa		13.42	□□□□□ -0.26
RAB35-204	ENST00000540803	RNF212	Q495C1	297 aa		13.42	□□□□□ -0.26
RAB35-204	ENST00000540803		Q6ZTI0	123 aa		13.42	□□□□□ -0.26
RAB35-204	ENST00000540803	STAG3L2	P0CL84	134 aa		13.41	□□□□□ -0.26
RAB35-204	ENST00000540803	STAG3L3	P0CL85	134 aa		13.41	□□□□□ -0.26
RAB35-204	ENST00000540803	ARL14EPL	P0DKL9	152 aa		13.41	□□□□□ -0.26
RAB35-204	ENST00000540803	SERF2	P84101	59 aa		13.41	□□□□□ -0.26
RAB35-204	ENST00000540803	RPL7L1	Q6DKI1	246 aa	Known RBP	13.41	□□□□□ -0.26
RAB35-204	ENST00000540803	TP53TG3	Q9ULZ0	132 aa		13.41	□□□□□ -0.26
RAB35-204	ENST00000540803	IGHV1OR15-1	A0A075B7D0	117 aa		13.4	□□□□□ -0.26
RAB35-204	ENST00000540803	RGS13	O14921	159 aa		13.4	□□□□□ -0.26
RAB35-204	ENST00000540803	MB	P02144	154 aa		13.4	□□□□□ -0.26
RAB35-204	ENST00000540803	FAM74A1	Q5RGS3	127 aa		13.4	□□□□□ -0.26

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