RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 MAP1LC3AQ9H492 121 aa7.77□□□□□ -1.17
PHC1-208ENST00000540574 LINC00574Q9H8X3 128 aa7.77□□□□□ -1.17
PHC1-208ENST00000540574 VWC2LB2RUY7 222 aa7.76□□□□□ -1.17
PHC1-208ENST00000540574 GCSHP23434 173 aa7.76□□□□□ -1.17
PHC1-208ENST00000540574 TSPOP30536 169 aa7.76□□□□□ -1.17
PHC1-208ENST00000540574 ATP5L2Q7Z4Y8 100 aa7.76□□□□□ -1.17
PHC1-208ENST00000540574 C11orf44Q8N8P7 122 aa7.76□□□□□ -1.17
PHC1-208ENST00000540574 PHLDA3Q9Y5J5 127 aa7.76□□□□□ -1.17
PHC1-208ENST00000540574 SOX21Q9Y651 276 aaPredicted RBP7.76□□□□□ -1.17
PHC1-208ENST00000540574 PRRC2AP48634 2157 aaKnown RBP7.76□□□□□ -1.17
PHC1-208ENST00000540574 SVEP1Q4LDE5 3571 aa7.76□□□□□ -1.17
PHC1-208ENST00000540574 NPFFO15130 113 aa7.76□□□□□ -1.17
PHC1-208ENST00000540574 TGFAP01135 160 aa7.76□□□□□ -1.17
PHC1-208ENST00000540574 FAM231DQ6ZW35 169 aa7.76□□□□□ -1.17
PHC1-208ENST00000540574 TRAV26-2A0A0B4J265 109 aa7.76□□□□□ -1.17
PHC1-208ENST00000540574 H3BRN7 92 aa7.76□□□□□ -1.17
PHC1-208ENST00000540574 LTAP01374 205 aa7.76□□□□□ -1.17
PHC1-208ENST00000540574 GATA1P15976 413 aaPredicted RBP7.76□□□□□ -1.17
PHC1-208ENST00000540574 RNASE4P34096 147 aaKnown RBP7.76□□□□□ -1.17
PHC1-208ENST00000540574 ZNF124Q15973 351 aa7.76□□□□□ -1.17
PHC1-208ENST00000540574 LURAP1LQ8IV03 231 aa7.76□□□□□ -1.17
PHC1-208ENST00000540574 OR10J6PQ8NGY7 276 aa7.76□□□□□ -1.17
PHC1-208ENST00000540574 PIMREGQ9BSJ6 248 aa7.76□□□□□ -1.17
PHC1-208ENST00000540574 M0R1W7 72 aa7.75□□□□□ -1.17
PHC1-208ENST00000540574 LEPP41159 167 aa7.75□□□□□ -1.17
PHC1-208ENST00000540574 PRSS57Q6UWY2 283 aa7.75□□□□□ -1.17
PHC1-208ENST00000540574 SIGLEC15Q6ZMC9 328 aa7.75□□□□□ -1.17
PHC1-208ENST00000540574 TEX43Q6ZNM6 134 aa7.75□□□□□ -1.17
PHC1-208ENST00000540574 FOXC2Q99958 501 aa7.75□□□□□ -1.17
PHC1-208ENST00000540574 FASNP49327 2511 aaKnown RBP7.75□□□□□ -1.17
PHC1-208ENST00000540574 PRAC2D3DTV9 90 aa7.75□□□□□ -1.17
PHC1-208ENST00000540574 PAX1P15863 534 aa7.75□□□□□ -1.17
PHC1-208ENST00000540574 IGHV7-81A0A0B4J1V7 117 aa7.75□□□□□ -1.17
PHC1-208ENST00000540574 TRAV41A0A0B4J266 112 aa7.75□□□□□ -1.17
PHC1-208ENST00000540574 PSMB11A5LHX3 300 aa7.75□□□□□ -1.17
PHC1-208ENST00000540574 F6UB75 175 aa7.75□□□□□ -1.17
PHC1-208ENST00000540574 PAX8Q06710 450 aa7.75□□□□□ -1.17
PHC1-208ENST00000540574 FANCD2OSQ96PS1 177 aa7.75□□□□□ -1.17
PHC1-208ENST00000540574 C20orf144Q9BQM9 153 aa7.75□□□□□ -1.17
PHC1-208ENST00000540574 JKAMPQ9P055 326 aa7.75□□□□□ -1.17
PHC1-208ENST00000540574 MRPL27Q9P0M9 148 aaKnown RBP7.75□□□□□ -1.17
PHC1-208ENST00000540574 FLNCQ14315 2725 aa7.74□□□□□ -1.17
PHC1-208ENST00000540574 EGR2P11161 476 aaPredicted RBP7.74□□□□□ -1.17
PHC1-208ENST00000540574 HOXB4P17483 251 aaPredicted RBP7.74□□□□□ -1.17
PHC1-208ENST00000540574 TMEM95Q3KNT9 176 aa7.74□□□□□ -1.17
PHC1-208ENST00000540574 FAM106AQ4KMX7 169 aa7.74□□□□□ -1.17
PHC1-208ENST00000540574 MYOZ3Q8TDC0 251 aa7.74□□□□□ -1.17
PHC1-208ENST00000540574 PRR25Q96S07 402 aa7.74□□□□□ -1.17
PHC1-208ENST00000540574 RNF5Q99942 180 aa7.74□□□□□ -1.17
PHC1-208ENST00000540574 DOPEY1Q5JWR5 2465 aa7.74□□□□□ -1.17
PHC1-208ENST00000540574 DLEU1O43261 78 aa7.74□□□□□ -1.17
PHC1-208ENST00000540574 CTSGP08311 255 aa7.74□□□□□ -1.17
PHC1-208ENST00000540574 FOSL1P15407 271 aa7.74□□□□□ -1.17
PHC1-208ENST00000540574 ZNF502Q8TBZ5 544 aa7.74□□□□□ -1.17
PHC1-208ENST00000540574 KIR2DL5BA0A0G2JN68 375 aa7.73□□□□□ -1.17
PHC1-208ENST00000540574 KIR2DL5BA0A0G2JPC4 375 aa7.73□□□□□ -1.17
PHC1-208ENST00000540574 C19orf84I3L1E1 186 aa7.73□□□□□ -1.17
PHC1-208ENST00000540574 CRYGCP07315 174 aa7.73□□□□□ -1.17
PHC1-208ENST00000540574 SFTA2Q6UW10 78 aa7.73□□□□□ -1.17
PHC1-208ENST00000540574 KIR2DL5AQ8N109 375 aa7.73□□□□□ -1.17
PHC1-208ENST00000540574 A0A1W2PPR1 153 aa7.73□□□□□ -1.17
PHC1-208ENST00000540574 NDUFA3O95167 84 aa7.73□□□□□ -1.17
PHC1-208ENST00000540574 OVOL3O00110 214 aa7.72□□□□□ -1.17
PHC1-208ENST00000540574 NPYP01303 97 aa7.72□□□□□ -1.17
PHC1-208ENST00000540574 PRB1P04280 392 aa7.72□□□□□ -1.17
PHC1-208ENST00000540574 BLCAPP62952 87 aa7.72□□□□□ -1.17
PHC1-208ENST00000540574 LOXL1Q08397 574 aaPredicted RBP7.72□□□□□ -1.17
PHC1-208ENST00000540574 IFI27L1Q96BM0 104 aa7.72□□□□□ -1.17
PHC1-208ENST00000540574 MRPL51Q4U2R6 128 aaKnown RBP7.72□□□□□ -1.17
PHC1-208ENST00000540574 RASL11AQ6T310 242 aa7.72□□□□□ -1.17
PHC1-208ENST00000540574 OR11H6Q8NGC7 330 aa7.72□□□□□ -1.17
PHC1-208ENST00000540574 IGLV11-55A0A075B6I3 123 aa7.72□□□□□ -1.17
PHC1-208ENST00000540574 IGHV3OR16-12A0A075B7B8 117 aa7.72□□□□□ -1.17
PHC1-208ENST00000540574 IGHV2-70DA0A0C4DH43 119 aa7.72□□□□□ -1.17
PHC1-208ENST00000540574 ZNF688P0C7X2 276 aa7.72□□□□□ -1.17
PHC1-208ENST00000540574 DNLZQ5SXM8 178 aa7.72□□□□□ -1.17
PHC1-208ENST00000540574 MINOS1Q5TGZ0 78 aa7.72□□□□□ -1.17
PHC1-208ENST00000540574 C8orf31Q8N9H6 132 aa7.72□□□□□ -1.17
PHC1-208ENST00000540574 Q8N9W7 124 aa7.72□□□□□ -1.17
PHC1-208ENST00000540574 CHCHD1Q96BP2 118 aaKnown RBP7.72□□□□□ -1.17
PHC1-208ENST00000540574 MBD6Q96DN6 1003 aa7.72□□□□□ -1.17
PHC1-208ENST00000540574 MINOS1-NBL1R4GNA1 71 aa7.72□□□□□ -1.17
PHC1-208ENST00000540574 HBDP02042 147 aa7.71□□□□□ -1.17
PHC1-208ENST00000540574 UBE2E1P51965 193 aa7.71□□□□□ -1.17
PHC1-208ENST00000540574 EMP1P54849 157 aa7.71□□□□□ -1.17
PHC1-208ENST00000540574 FOXE3Q13461 319 aa7.71□□□□□ -1.17
PHC1-208ENST00000540574 GTSCR1Q86UQ5 136 aa7.71□□□□□ -1.17
PHC1-208ENST00000540574 C14orf178Q8N769 122 aaPredicted RBP7.71□□□□□ -1.17
PHC1-208ENST00000540574 WIPF2Q8TF74 440 aaPredicted RBP7.71□□□□□ -1.17
PHC1-208ENST00000540574 SIGLEC8Q9NYZ4 499 aa7.71□□□□□ -1.17
PHC1-208ENST00000540574 IGHV4-61A0A0C4DH41 118 aa7.71□□□□□ -1.18
PHC1-208ENST00000540574 IGHV4-38-2P0DP08 117 aa7.71□□□□□ -1.18
PHC1-208ENST00000540574 RPL24P83731 157 aaKnown RBP7.71□□□□□ -1.18
PHC1-208ENST00000540574 C12orf54Q6X4T0 127 aa7.71□□□□□ -1.18
PHC1-208ENST00000540574 SCGB1D4Q6XE38 83 aa7.71□□□□□ -1.18
PHC1-208ENST00000540574 ZNF492Q9P255 531 aa7.71□□□□□ -1.18
PHC1-208ENST00000540574 ZNF80P51504 273 aaPredicted RBP7.71□□□□□ -1.18
PHC1-208ENST00000540574 RPS20P60866 119 aaKnown RBP7.7□□□□□ -1.18
PHC1-208ENST00000540574 TTTY13Q9BZ97 58 aa7.7□□□□□ -1.18
PHC1-208ENST00000540574 CRYBG3Q68DQ2 2970 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms