RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 CAV2P51636 162 aa8.23□□□□□ -1.09
CBX3P4-202ENST00000540428 CDPF1Q6NVV7 123 aa8.23□□□□□ -1.09
CBX3P4-202ENST00000540428 ST6GAL2Q96JF0 529 aa8.23□□□□□ -1.09
CBX3P4-202ENST00000540428 SDHCQ99643 169 aaPredicted RBP8.23□□□□□ -1.09
CBX3P4-202ENST00000540428 C11orf1Q9H5F2 150 aa8.23□□□□□ -1.09
CBX3P4-202ENST00000540428 PTTG2Q9NZH5 202 aa8.23□□□□□ -1.09
CBX3P4-202ENST00000540428 LSM5Q9Y4Y9 91 aaKnown RBP8.23□□□□□ -1.09
CBX3P4-202ENST00000540428 ICOSQ9Y6W8 199 aa8.23□□□□□ -1.09
CBX3P4-202ENST00000540428 EPM2AB3EWF7 344 aa8.22□□□□□ -1.09
CBX3P4-202ENST00000540428 PAX4O43316 350 aa8.22□□□□□ -1.09
CBX3P4-202ENST00000540428 MPDU1O75352 247 aa8.22□□□□□ -1.09
CBX3P4-202ENST00000540428 CST7O76096 145 aa8.22□□□□□ -1.09
CBX3P4-202ENST00000540428 NDUFB4O95168 129 aa8.22□□□□□ -1.09
CBX3P4-202ENST00000540428 PVALBP20472 110 aaPredicted RBP8.22□□□□□ -1.09
CBX3P4-202ENST00000540428 S100A11P31949 105 aa8.22□□□□□ -1.09
CBX3P4-202ENST00000540428 SLAQ13239 276 aa8.22□□□□□ -1.09
CBX3P4-202ENST00000540428 C9orf47Q6ZRZ4 202 aa8.22□□□□□ -1.09
CBX3P4-202ENST00000540428 AGPAT4-IT1Q9H0P7 198 aa8.22□□□□□ -1.09
CBX3P4-202ENST00000540428 PRO0255Q9UI72 69 aa8.22□□□□□ -1.09
CBX3P4-202ENST00000540428 FAM24AA6NFZ4 105 aa8.21□□□□□ -1.1
CBX3P4-202ENST00000540428 CCSO14618 274 aa8.21□□□□□ -1.1
CBX3P4-202ENST00000540428 NXPH4O95158 308 aa8.21□□□□□ -1.1
CBX3P4-202ENST00000540428 IL7P13232 177 aa8.21□□□□□ -1.1
CBX3P4-202ENST00000540428 SULT1A1P50225 295 aa8.21□□□□□ -1.1
CBX3P4-202ENST00000540428 ERVFC1-1P60608 527 aa8.21□□□□□ -1.1
CBX3P4-202ENST00000540428 BAXQ07812 192 aa8.21□□□□□ -1.1
CBX3P4-202ENST00000540428 CD300CQ08708 224 aa8.21□□□□□ -1.1
CBX3P4-202ENST00000540428 ERCC8Q13216 396 aa8.21□□□□□ -1.1
CBX3P4-202ENST00000540428 BTN1A1Q13410 526 aa8.21□□□□□ -1.1
CBX3P4-202ENST00000540428 NFE4Q86UQ8 179 aa8.21□□□□□ -1.1
CBX3P4-202ENST00000540428 VGLL1Q99990 258 aa8.21□□□□□ -1.1
CBX3P4-202ENST00000540428 AAMDCQ9H7C9 122 aa8.21□□□□□ -1.1
CBX3P4-202ENST00000540428 KLF12Q9Y4X4 402 aa8.21□□□□□ -1.1
CBX3P4-202ENST00000540428 TIMM9Q9Y5J7 89 aa8.21□□□□□ -1.1
CBX3P4-202ENST00000540428 TRBV7-9A0A0J9YWB2 115 aa8.2□□□□□ -1.1
CBX3P4-202ENST00000540428 UBE2L5PA0A1B0GUS4 154 aa8.2□□□□□ -1.1
CBX3P4-202ENST00000540428 C5orf51A6NDU8 294 aa8.2□□□□□ -1.1
CBX3P4-202ENST00000540428 FAM25EA8MYX2 175 aa8.2□□□□□ -1.1
CBX3P4-202ENST00000540428 K7EP13 123 aa8.2□□□□□ -1.1
CBX3P4-202ENST00000540428 GPX1P07203 203 aa8.2□□□□□ -1.1
CBX3P4-202ENST00000540428 RNASE4P34096 147 aaKnown RBP8.2□□□□□ -1.1
CBX3P4-202ENST00000540428 HBG1P69891 147 aa8.2□□□□□ -1.1
CBX3P4-202ENST00000540428 HBG2P69892 147 aa8.2□□□□□ -1.1
CBX3P4-202ENST00000540428 MRPL23Q16540 153 aaKnown RBP8.2□□□□□ -1.1
CBX3P4-202ENST00000540428 ATP6V1FQ16864 119 aa8.2□□□□□ -1.1
CBX3P4-202ENST00000540428 TMEM78Q5T7P6 136 aa8.2□□□□□ -1.1
CBX3P4-202ENST00000540428 STX12Q86Y82 276 aa8.2□□□□□ -1.1
CBX3P4-202ENST00000540428 TMEM252Q8N6L7 170 aa8.2□□□□□ -1.1
CBX3P4-202ENST00000540428 C2orf50Q96LR7 162 aa8.2□□□□□ -1.1
CBX3P4-202ENST00000540428 LYRM2Q9NU23 88 aaPredicted RBP8.2□□□□□ -1.1
CBX3P4-202ENST00000540428 IGHV1OR15-1A0A075B7D0 117 aa8.19□□□□□ -1.1
CBX3P4-202ENST00000540428 TRAV9-2A0A087WT02 112 aa8.19□□□□□ -1.1
CBX3P4-202ENST00000540428 RGS13O14921 159 aa8.19□□□□□ -1.1
CBX3P4-202ENST00000540428 CRYBA4P53673 196 aa8.19□□□□□ -1.1
CBX3P4-202ENST00000540428 LYPD1Q8N2G4 141 aa8.19□□□□□ -1.1
CBX3P4-202ENST00000540428 EXOC3-AS1Q8N2X6 119 aa8.19□□□□□ -1.1
CBX3P4-202ENST00000540428 ZFAND2AQ8N6M9 145 aa8.19□□□□□ -1.1
CBX3P4-202ENST00000540428 ARPC5LQ9BPX5 153 aa8.19□□□□□ -1.1
CBX3P4-202ENST00000540428 ZNF492Q9P255 531 aa8.19□□□□□ -1.1
CBX3P4-202ENST00000540428 IGSF23A1L1A6 192 aa8.18□□□□□ -1.1
CBX3P4-202ENST00000540428 PLA2G10O15496 165 aa8.18□□□□□ -1.1
CBX3P4-202ENST00000540428 TCRBP04435 133 aa8.18□□□□□ -1.1
CBX3P4-202ENST00000540428 PYYP10082 97 aa8.18□□□□□ -1.1
CBX3P4-202ENST00000540428 FGF7P21781 194 aa8.18□□□□□ -1.1
CBX3P4-202ENST00000540428 XGP55808 180 aa8.18□□□□□ -1.1
CBX3P4-202ENST00000540428 IL15RAQ13261 267 aa8.18□□□□□ -1.1
CBX3P4-202ENST00000540428 ICAM4Q14773 271 aa8.18□□□□□ -1.1
CBX3P4-202ENST00000540428 LYPD5Q6UWN5 251 aa8.18□□□□□ -1.1
CBX3P4-202ENST00000540428 NEGR1Q7Z3B1 354 aa8.18□□□□□ -1.1
CBX3P4-202ENST00000540428 BLNKQ8WV28 456 aa8.18□□□□□ -1.1
CBX3P4-202ENST00000540428 MRPL16Q9NX20 251 aaKnown RBP8.18□□□□□ -1.1
CBX3P4-202ENST00000540428 HHLA3Q9XRX5 114 aa8.18□□□□□ -1.1
CBX3P4-202ENST00000540428 A0A087WTM6 91 aa8.17□□□□□ -1.1
CBX3P4-202ENST00000540428 LYRM1O43325 122 aa8.17□□□□□ -1.1
CBX3P4-202ENST00000540428 IGHV3-53P01767 116 aa8.17□□□□□ -1.1
CBX3P4-202ENST00000540428 S100A10P60903 97 aa8.17□□□□□ -1.1
CBX3P4-202ENST00000540428 ZNF415Q09FC8 603 aa8.17□□□□□ -1.1
CBX3P4-202ENST00000540428 FHL2Q14192 279 aa8.17□□□□□ -1.1
CBX3P4-202ENST00000540428 PRR9Q5T870 116 aa8.17□□□□□ -1.1
CBX3P4-202ENST00000540428 IQCF2Q8IXL9 164 aa8.17□□□□□ -1.1
CBX3P4-202ENST00000540428 SLC25A2Q9BXI2 301 aa8.17□□□□□ -1.1
CBX3P4-202ENST00000540428 NPCDR1Q9BY65 106 aa8.17□□□□□ -1.1
CBX3P4-202ENST00000540428 MRPL32Q9BYC8 188 aaKnown RBP8.17□□□□□ -1.1
CBX3P4-202ENST00000540428 TP53TG3Q9ULZ0 132 aa8.17□□□□□ -1.1
CBX3P4-202ENST00000540428 LY96Q9Y6Y9 160 aa8.17□□□□□ -1.1
CBX3P4-202ENST00000540428 TRAV6A0A075B6T7 132 aa8.16□□□□□ -1.1
CBX3P4-202ENST00000540428 IGKV2-40A0A087WW87 121 aaPredicted RBP8.16□□□□□ -1.1
CBX3P4-202ENST00000540428 PRAF2O60831 178 aa8.16□□□□□ -1.1
CBX3P4-202ENST00000540428 IFNA5P01569 189 aa8.16□□□□□ -1.1
CBX3P4-202ENST00000540428 IGKV2D-40P01614 121 aaPredicted RBP8.16□□□□□ -1.1
CBX3P4-202ENST00000540428 NBEAP1P0C6P0 100 aa8.16□□□□□ -1.1
CBX3P4-202ENST00000540428 INAFM2P0DMQ5 153 aa8.16□□□□□ -1.1
CBX3P4-202ENST00000540428 ZNF138P52744 262 aa8.16□□□□□ -1.1
CBX3P4-202ENST00000540428 RAB32Q13637 225 aa8.16□□□□□ -1.1
CBX3P4-202ENST00000540428 GCSAMLQ5JQS6 135 aa8.16□□□□□ -1.1
CBX3P4-202ENST00000540428 FAM122CQ6P4D5 195 aa8.16□□□□□ -1.1
CBX3P4-202ENST00000540428 FAM167A-AS1Q96KT0 104 aa8.16□□□□□ -1.1
CBX3P4-202ENST00000540428 C8orf49Q96NF6 230 aa8.16□□□□□ -1.1
CBX3P4-202ENST00000540428 SEC22CQ9BRL7 303 aa8.16□□□□□ -1.1
CBX3P4-202ENST00000540428 OR51M1Q9H341 326 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms