RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 F8WDY8 70 aa7.54□□□□□ -1.2
CLIP1-212ENST00000540304 PEX7O00628 323 aa7.54□□□□□ -1.2
CLIP1-212ENST00000540304 IL4P05112 153 aa7.54□□□□□ -1.2
CLIP1-212ENST00000540304 IGF2BP2-AS1Q96M15 143 aa7.54□□□□□ -1.2
CLIP1-212ENST00000540304 SHANK2-AS3Q9BTD1 123 aa7.54□□□□□ -1.2
CLIP1-212ENST00000540304 C1QTNF4Q9BXJ3 329 aa7.54□□□□□ -1.2
CLIP1-212ENST00000540304 H3BRN7 92 aa7.53□□□□□ -1.2
CLIP1-212ENST00000540304 FCGR2BP31994 310 aaPredicted RBP7.53□□□□□ -1.2
CLIP1-212ENST00000540304 FOXL1Q12952 345 aa7.53□□□□□ -1.2
CLIP1-212ENST00000540304 JMJD8Q96S16 334 aa7.53□□□□□ -1.2
CLIP1-212ENST00000540304 CHD6Q8TD26 2715 aa7.53□□□□□ -1.2
CLIP1-212ENST00000540304 SERF1AO75920 110 aa7.53□□□□□ -1.2
CLIP1-212ENST00000540304 IGHV3-23P01764 117 aa7.53□□□□□ -1.2
CLIP1-212ENST00000540304 HIST1H1EP10412 219 aaKnown RBP7.53□□□□□ -1.2
CLIP1-212ENST00000540304 ATP5G2Q06055 141 aa7.53□□□□□ -1.2
CLIP1-212ENST00000540304 LINC01356Q8N9X3 169 aa7.53□□□□□ -1.2
CLIP1-212ENST00000540304 ANAPC13Q9BS18 74 aa7.53□□□□□ -1.2
CLIP1-212ENST00000540304 A0A096LNT2 108 aa7.52□□□□□ -1.21
CLIP1-212ENST00000540304 PGPA6NDG6 321 aa7.52□□□□□ -1.21
CLIP1-212ENST00000540304 LINC01548A6NM66 108 aa7.52□□□□□ -1.21
CLIP1-212ENST00000540304 SLC17A3O00476 420 aa7.52□□□□□ -1.21
CLIP1-212ENST00000540304 SLC25A5P05141 298 aaKnown RBP7.52□□□□□ -1.21
CLIP1-212ENST00000540304 SAMD10Q9BYL1 202 aa7.52□□□□□ -1.21
CLIP1-212ENST00000540304 EPDR1Q9UM22 224 aa7.52□□□□□ -1.21
CLIP1-212ENST00000540304 SOX21Q9Y651 276 aaPredicted RBP7.52□□□□□ -1.21
CLIP1-212ENST00000540304 TRBV9A0A0B4J1U6 114 aa7.52□□□□□ -1.21
CLIP1-212ENST00000540304 G3V318 75 aa7.52□□□□□ -1.21
CLIP1-212ENST00000540304 K7EP34 96 aa7.52□□□□□ -1.21
CLIP1-212ENST00000540304 CD5LO43866 347 aa7.52□□□□□ -1.21
CLIP1-212ENST00000540304 TNFRSF6BO95407 300 aa7.52□□□□□ -1.21
CLIP1-212ENST00000540304 IGLV2-8P01709 118 aa7.52□□□□□ -1.21
CLIP1-212ENST00000540304 AMY1AP04745 511 aa7.52□□□□□ -1.21
CLIP1-212ENST00000540304 TYMSP04818 313 aa7.52□□□□□ -1.21
CLIP1-212ENST00000540304 C15orf32Q32M92 178 aa7.52□□□□□ -1.21
CLIP1-212ENST00000540304 BPIFA4PQ86YQ2 179 aa7.52□□□□□ -1.21
CLIP1-212ENST00000540304 NHLRC2Q8NBF2 726 aa7.52□□□□□ -1.21
CLIP1-212ENST00000540304 LINC00479Q96M42 142 aa7.52□□□□□ -1.21
CLIP1-212ENST00000540304 Q9H3A6 140 aa7.52□□□□□ -1.21
CLIP1-212ENST00000540304 ZNF469Q96JG9 3925 aaPredicted RBP7.51□□□□□ -1.21
CLIP1-212ENST00000540304 CTSGP08311 255 aa7.51□□□□□ -1.21
CLIP1-212ENST00000540304 COL8A1P27658 744 aa7.51□□□□□ -1.21
CLIP1-212ENST00000540304 CRIP2P52943 208 aaPredicted RBP7.51□□□□□ -1.21
CLIP1-212ENST00000540304 GNG5P63218 68 aa7.51□□□□□ -1.21
CLIP1-212ENST00000540304 ZNF502Q8TBZ5 544 aa7.51□□□□□ -1.21
CLIP1-212ENST00000540304 TMEM190Q8WZ59 177 aa7.51□□□□□ -1.21
CLIP1-212ENST00000540304 SGK494Q96LW2 274 aa7.51□□□□□ -1.21
CLIP1-212ENST00000540304 OTORQ9NRC9 128 aa7.51□□□□□ -1.21
CLIP1-212ENST00000540304 BEX4Q9NWD9 120 aaPredicted RBP7.51□□□□□ -1.21
CLIP1-212ENST00000540304 IL36BQ9NZH7 164 aa7.51□□□□□ -1.21
CLIP1-212ENST00000540304 TENM4Q6N022 2769 aa7.51□□□□□ -1.21
CLIP1-212ENST00000540304 A6NDX4 124 aa7.51□□□□□ -1.21
CLIP1-212ENST00000540304 SMIM9A6NGZ8 99 aa7.51□□□□□ -1.21
CLIP1-212ENST00000540304 F2Z2F3 143 aa7.51□□□□□ -1.21
CLIP1-212ENST00000540304 H3BUX3 64 aa7.51□□□□□ -1.21
CLIP1-212ENST00000540304 AVPP01185 164 aa7.51□□□□□ -1.21
CLIP1-212ENST00000540304 KRTAP10-9P60411 292 aa7.51□□□□□ -1.21
CLIP1-212ENST00000540304 MRPL23Q16540 153 aaKnown RBP7.51□□□□□ -1.21
CLIP1-212ENST00000540304 OSTCQ9NRP0 149 aa7.51□□□□□ -1.21
CLIP1-212ENST00000540304 TRAPPC1Q9Y5R8 145 aa7.51□□□□□ -1.21
CLIP1-212ENST00000540304 TRAV41A0A0B4J266 112 aa7.5□□□□□ -1.21
CLIP1-212ENST00000540304 C7orf71A4D174 169 aa7.5□□□□□ -1.21
CLIP1-212ENST00000540304 J3QLI3 93 aa7.5□□□□□ -1.21
CLIP1-212ENST00000540304 ISLRO14498 428 aa7.5□□□□□ -1.21
CLIP1-212ENST00000540304 MGST1P10620 155 aaKnown RBP7.5□□□□□ -1.21
CLIP1-212ENST00000540304 RPL15P61313 204 aaKnown RBP7.5□□□□□ -1.21
CLIP1-212ENST00000540304 UBE2G1P62253 170 aa7.5□□□□□ -1.21
CLIP1-212ENST00000540304 C19orf54Q5BKX5 351 aa7.5□□□□□ -1.21
CLIP1-212ENST00000540304 BAGE2Q86Y30 109 aa7.5□□□□□ -1.21
CLIP1-212ENST00000540304 BCL6BQ8N143 479 aaPredicted RBP7.5□□□□□ -1.21
CLIP1-212ENST00000540304 DUX5Q96PT3 197 aa7.5□□□□□ -1.21
CLIP1-212ENST00000540304 KLF12Q9Y4X4 402 aa7.5□□□□□ -1.21
CLIP1-212ENST00000540304 V9GYV3 84 aa7.5□□□□□ -1.21
CLIP1-212ENST00000540304 TLN2Q9Y4G6 2542 aa7.5□□□□□ -1.21
CLIP1-212ENST00000540304 TRBV19A0A075B6N1 114 aa7.5□□□□□ -1.21
CLIP1-212ENST00000540304 TRAV9-1A0A075B6T8 112 aa7.5□□□□□ -1.21
CLIP1-212ENST00000540304 GPR183P32249 361 aa7.5□□□□□ -1.21
CLIP1-212ENST00000540304 ADMP35318 185 aa7.5□□□□□ -1.21
CLIP1-212ENST00000540304 LOXL1Q08397 574 aaPredicted RBP7.5□□□□□ -1.21
CLIP1-212ENST00000540304 LY6EQ16553 131 aa7.5□□□□□ -1.21
CLIP1-212ENST00000540304 DEFB113Q30KQ7 82 aa7.5□□□□□ -1.21
CLIP1-212ENST00000540304 ANXA2RQ3ZCQ2 193 aa7.5□□□□□ -1.21
CLIP1-212ENST00000540304 LRRC75A-AS1Q8N1F1 130 aa7.5□□□□□ -1.21
CLIP1-212ENST00000540304 EEF1AKMT3Q96AZ1 226 aa7.5□□□□□ -1.21
CLIP1-212ENST00000540304 NAV2Q8IVL1 2488 aa7.49□□□□□ -1.21
CLIP1-212ENST00000540304 IGHV3OR16-8A0A075B7F1 116 aa7.49□□□□□ -1.21
CLIP1-212ENST00000540304 IGHV3-35A0A0C4DH35 117 aa7.49□□□□□ -1.21
CLIP1-212ENST00000540304 MRPS12O15235 138 aaKnown RBP7.49□□□□□ -1.21
CLIP1-212ENST00000540304 TCRAP04437 139 aa7.49□□□□□ -1.21
CLIP1-212ENST00000540304 RPEL1Q2QD12 228 aa7.49□□□□□ -1.21
CLIP1-212ENST00000540304 IBA57Q5T440 356 aaKnown RBP7.49□□□□□ -1.21
CLIP1-212ENST00000540304 ASCL2Q99929 193 aa7.49□□□□□ -1.21
CLIP1-212ENST00000540304 RNASE7Q9H1E1 156 aaKnown RBP7.49□□□□□ -1.21
CLIP1-212ENST00000540304 DOPEY2Q9Y3R5 2298 aa7.49□□□□□ -1.21
CLIP1-212ENST00000540304 TRBV7-1A0A0A6YYK4 115 aa7.49□□□□□ -1.21
CLIP1-212ENST00000540304 TMEM189A5PLL7 270 aa7.49□□□□□ -1.21
CLIP1-212ENST00000540304 IGF1P05019 195 aa7.49□□□□□ -1.21
CLIP1-212ENST00000540304 SPINK8P0C7L1 97 aa7.49□□□□□ -1.21
CLIP1-212ENST00000540304 IGLL1P15814 213 aa7.49□□□□□ -1.21
CLIP1-212ENST00000540304 C8orf86Q6ZUL3 223 aa7.49□□□□□ -1.21
CLIP1-212ENST00000540304 LYPD1Q8N2G4 141 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms