RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 GCSAMLQ5JQS6 135 aa11.66□□□□□ -0.54
DDB1-216ENST00000539739 FAM78BQ5VT40 261 aa11.66□□□□□ -0.54
DDB1-216ENST00000539739 TEX43Q6ZNM6 134 aa11.66□□□□□ -0.54
DDB1-216ENST00000539739 RBPMS2Q6ZRY4 209 aaKnown RBP11.66□□□□□ -0.54
DDB1-216ENST00000539739 PYGO2Q9BRQ0 406 aa11.66□□□□□ -0.54
DDB1-216ENST00000539739 NIPSNAP3BQ9BS92 247 aa11.66□□□□□ -0.54
DDB1-216ENST00000539739 XKRY2A2RUG3 117 aa11.65□□□□□ -0.54
DDB1-216ENST00000539739 HELTA6NFD8 242 aa11.65□□□□□ -0.54
DDB1-216ENST00000539739 RHOBP62745 196 aa11.65□□□□□ -0.54
DDB1-216ENST00000539739 RPL11P62913 178 aaKnown RBP11.65□□□□□ -0.54
DDB1-216ENST00000539739 CD300EQ496F6 205 aaPredicted RBP11.65□□□□□ -0.54
DDB1-216ENST00000539739 OXLD1Q5BKU9 147 aa11.65□□□□□ -0.54
DDB1-216ENST00000539739 LCN12Q6JVE5 192 aa11.65□□□□□ -0.54
DDB1-216ENST00000539739 OR10G9Q8NGN4 311 aa11.65□□□□□ -0.54
DDB1-216ENST00000539739 OR10G7Q8NGN6 311 aa11.65□□□□□ -0.54
DDB1-216ENST00000539739 GPR82Q96P67 336 aa11.65□□□□□ -0.54
DDB1-216ENST00000539739 MRPL32Q9BYC8 188 aaKnown RBP11.65□□□□□ -0.54
DDB1-216ENST00000539739 COX11Q9Y6N1 276 aa11.65□□□□□ -0.54
DDB1-216ENST00000539739 TGIF2-C20orf24A0A0A6YYL0 155 aa11.64□□□□□ -0.55
DDB1-216ENST00000539739 TRAV25A0A0B4J276 109 aa11.64□□□□□ -0.55
DDB1-216ENST00000539739 SERTM2A0A1B0GWG4 89 aa11.64□□□□□ -0.55
DDB1-216ENST00000539739 A0A1W2PPV4 95 aa11.64□□□□□ -0.55
DDB1-216ENST00000539739 WIPF1O43516 503 aa11.64□□□□□ -0.55
DDB1-216ENST00000539739 GLMPQ8WWB7 406 aa11.64□□□□□ -0.55
DDB1-216ENST00000539739 CLUHP3Q96NS8 147 aa11.64□□□□□ -0.55
DDB1-216ENST00000539739 FUT9Q9Y231 359 aa11.64□□□□□ -0.55
DDB1-216ENST00000539739 RPL7P18124 248 aaKnown RBP11.64□□□□□ -0.55
DDB1-216ENST00000539739 GALR1P47211 349 aa11.64□□□□□ -0.55
DDB1-216ENST00000539739 PAFAH1B2P68402 229 aa11.64□□□□□ -0.55
DDB1-216ENST00000539739 TMEM41BQ5BJD5 291 aa11.64□□□□□ -0.55
DDB1-216ENST00000539739 SIGLEC15Q6ZMC9 328 aa11.64□□□□□ -0.55
DDB1-216ENST00000539739 SELENOKQ9Y6D0 94 aa11.64□□□□□ -0.55
DDB1-216ENST00000539739 SCGB1D1O95968 90 aa11.63□□□□□ -0.55
DDB1-216ENST00000539739 FAM3BP58499 235 aaPredicted RBP11.63□□□□□ -0.55
DDB1-216ENST00000539739 BPIFA4PQ86YQ2 179 aa11.63□□□□□ -0.55
DDB1-216ENST00000539739 TMEM61Q8N0U2 210 aa11.63□□□□□ -0.55
DDB1-216ENST00000539739 OR4B1Q8NGF8 309 aa11.63□□□□□ -0.55
DDB1-216ENST00000539739 TAS2R45P59539 299 aa11.62□□□□□ -0.55
DDB1-216ENST00000539739 FAM90A2PQ658T7 463 aa11.62□□□□□ -0.55
DDB1-216ENST00000539739 CST9LQ9H4G1 147 aa11.62□□□□□ -0.55
DDB1-216ENST00000539739 PKD1L1Q8TDX9 2849 aa11.62□□□□□ -0.55
DDB1-216ENST00000539739 DNHD1Q96M86 4753 aa11.61□□□□□ -0.55
DDB1-216ENST00000539739 IGKV3-7A0A075B6H7 116 aa11.61□□□□□ -0.55
DDB1-216ENST00000539739 TRAV5A0A0B4J249 113 aa11.61□□□□□ -0.55
DDB1-216ENST00000539739 G3V4G9 280 aa11.61□□□□□ -0.55
DDB1-216ENST00000539739 SAMD5Q5TGI4 173 aa11.61□□□□□ -0.55
DDB1-216ENST00000539739 MORN5Q5VZ52 161 aa11.61□□□□□ -0.55
DDB1-216ENST00000539739 MIR17HGQ75NE6 70 aa11.61□□□□□ -0.55
DDB1-216ENST00000539739 SPAG8Q99932 426 aaPredicted RBP11.61□□□□□ -0.55
DDB1-216ENST00000539739 RPRMQ9NS64 109 aa11.61□□□□□ -0.55
DDB1-216ENST00000539739 MGAM2Q2M2H8 2515 aa11.61□□□□□ -0.55
DDB1-216ENST00000539739 IZUMO1RA6ND01 250 aa11.6□□□□□ -0.55
DDB1-216ENST00000539739 ZNF785A8K8V0 405 aa11.6□□□□□ -0.55
DDB1-216ENST00000539739 PMS2P11Q13670 270 aa11.6□□□□□ -0.55
DDB1-216ENST00000539739 SPATA31B1PQ5VZV4 182 aa11.6□□□□□ -0.55
DDB1-216ENST00000539739 RPP25LQ8N5L8 163 aaKnown RBP11.6□□□□□ -0.55
DDB1-216ENST00000539739 STXBP6Q8NFX7 210 aa11.6□□□□□ -0.55
DDB1-216ENST00000539739 J3KRW8 73 aa11.6□□□□□ -0.55
DDB1-216ENST00000539739 SRP19P09132 144 aaKnown RBP11.6□□□□□ -0.55
DDB1-216ENST00000539739 MTURNQ8N3F0 131 aa11.6□□□□□ -0.55
DDB1-216ENST00000539739 MS4A6AQ9H2W1 248 aa11.6□□□□□ -0.55
DDB1-216ENST00000539739 RBFOX3A6NFN3 312 aa11.59□□□□□ -0.55
DDB1-216ENST00000539739 OR4C46A6NHA9 309 aa11.59□□□□□ -0.55
DDB1-216ENST00000539739 OR7C2O60412 319 aa11.59□□□□□ -0.55
DDB1-216ENST00000539739 ZNF506Q5JVG8 444 aa11.59□□□□□ -0.55
DDB1-216ENST00000539739 PRR27Q6MZM9 219 aa11.59□□□□□ -0.55
DDB1-216ENST00000539739 WFDC3Q8IUB2 231 aa11.59□□□□□ -0.55
DDB1-216ENST00000539739 VAMP8Q9BV40 100 aa11.59□□□□□ -0.55
DDB1-216ENST00000539739 SLC25A2Q9BXI2 301 aa11.59□□□□□ -0.55
DDB1-216ENST00000539739 NRN1Q9NPD7 142 aa11.59□□□□□ -0.55
DDB1-216ENST00000539739 TMEM14CQ9P0S9 112 aa11.59□□□□□ -0.55
DDB1-216ENST00000539739 UQCR10Q9UDW1 63 aa11.59□□□□□ -0.55
DDB1-216ENST00000539739 CMYA5Q8N3K9 4069 aa11.59□□□□□ -0.55
DDB1-216ENST00000539739 TRAV2A0A0B4J234 112 aa11.58□□□□□ -0.56
DDB1-216ENST00000539739 CTXND1A0A1B0GTU2 59 aa11.58□□□□□ -0.56
DDB1-216ENST00000539739 H0Y8G0 127 aa11.58□□□□□ -0.56
DDB1-216ENST00000539739 GP9P14770 177 aa11.58□□□□□ -0.56
DDB1-216ENST00000539739 TFPI2P48307 235 aa11.58□□□□□ -0.56
DDB1-216ENST00000539739 EGFEM1PQ0D2K5 195 aa11.58□□□□□ -0.56
DDB1-216ENST00000539739 SAMD13Q5VXD3 122 aa11.58□□□□□ -0.56
DDB1-216ENST00000539739 DPPA3Q6W0C5 159 aa11.58□□□□□ -0.56
DDB1-216ENST00000539739 PQLC2Q6ZP29 291 aa11.58□□□□□ -0.56
DDB1-216ENST00000539739 FAM167A-AS1Q96KT0 104 aa11.58□□□□□ -0.56
DDB1-216ENST00000539739 PAXXQ9BUH6 204 aa11.58□□□□□ -0.56
DDB1-216ENST00000539739 ZNF256Q9Y2P7 627 aaPredicted RBP11.58□□□□□ -0.56
DDB1-216ENST00000539739 MRPS16Q9Y3D3 137 aaKnown RBP11.58□□□□□ -0.56
DDB1-216ENST00000539739 SMAD5-AS1Q9Y6J3 95 aa11.58□□□□□ -0.56
DDB1-216ENST00000539739 SORL1Q92673 2214 aa11.58□□□□□ -0.56
DDB1-216ENST00000539739 ZNF705FA8MVS1 300 aaPredicted RBP11.57□□□□□ -0.56
DDB1-216ENST00000539739 MRPS12O15235 138 aaKnown RBP11.57□□□□□ -0.56
DDB1-216ENST00000539739 HBE1P02100 147 aa11.57□□□□□ -0.56
DDB1-216ENST00000539739 ZNF705DP0CH99 300 aaPredicted RBP11.57□□□□□ -0.56
DDB1-216ENST00000539739 ZNF705BP0CI00 300 aaPredicted RBP11.57□□□□□ -0.56
DDB1-216ENST00000539739 PLA2G2EQ9NZK7 142 aa11.57□□□□□ -0.56
DDB1-216ENST00000539739 A0A087X0K7 114 aa11.57□□□□□ -0.56
DDB1-216ENST00000539739 ZNF727A8MUV8 499 aa11.57□□□□□ -0.56
DDB1-216ENST00000539739 TYMSP04818 313 aa11.57□□□□□ -0.56
DDB1-216ENST00000539739 STAG3L2P0CL84 134 aa11.57□□□□□ -0.56
DDB1-216ENST00000539739 HIST1H1EP10412 219 aaKnown RBP11.57□□□□□ -0.56
DDB1-216ENST00000539739 FAM213BQ8TBF2 198 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms