RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 ARL14EPLP0DKL9 152 aa7.62□□□□□ -1.19
HMGA2-209ENST00000539662 BTN1A1Q13410 526 aa7.62□□□□□ -1.19
HMGA2-209ENST00000539662 ZNF726P1Q15940 193 aa7.62□□□□□ -1.19
HMGA2-209ENST00000539662 KHDC3LQ587J8 217 aa7.62□□□□□ -1.19
HMGA2-209ENST00000539662 LINC00476Q8WZB0 136 aa7.62□□□□□ -1.19
HMGA2-209ENST00000539662 RAB24Q969Q5 203 aa7.62□□□□□ -1.19
HMGA2-209ENST00000539662 AAMDCQ9H7C9 122 aa7.62□□□□□ -1.19
HMGA2-209ENST00000539662 PRELID1Q9Y255 219 aa7.62□□□□□ -1.19
HMGA2-209ENST00000539662 A0A1W2PPV4 95 aa7.61□□□□□ -1.19
HMGA2-209ENST00000539662 IGLL5B9A064 214 aa7.61□□□□□ -1.19
HMGA2-209ENST00000539662 STAG3L2P0CL84 134 aa7.61□□□□□ -1.19
HMGA2-209ENST00000539662 STAG3L3P0CL85 134 aa7.61□□□□□ -1.19
HMGA2-209ENST00000539662 SPART-AS1P0CW21 52 aa7.61□□□□□ -1.19
HMGA2-209ENST00000539662 CDC34P49427 236 aaPredicted RBP7.61□□□□□ -1.19
HMGA2-209ENST00000539662 GNG5P63218 68 aa7.61□□□□□ -1.19
HMGA2-209ENST00000539662 C9orf47Q6ZRZ4 202 aa7.61□□□□□ -1.19
HMGA2-209ENST00000539662 ZFAND2AQ8N6M9 145 aa7.61□□□□□ -1.19
HMGA2-209ENST00000539662 ST6GAL2Q96JF0 529 aa7.61□□□□□ -1.19
HMGA2-209ENST00000539662 HYLS1Q96M11 299 aa7.61□□□□□ -1.19
HMGA2-209ENST00000539662 APLNQ9ULZ1 77 aa7.61□□□□□ -1.19
HMGA2-209ENST00000539662 DEFB131BA0A096LNP1 70 aa7.6□□□□□ -1.19
HMGA2-209ENST00000539662 TRAV10A0A0B4J240 114 aa7.6□□□□□ -1.19
HMGA2-209ENST00000539662 PGPA6NDG6 321 aa7.6□□□□□ -1.19
HMGA2-209ENST00000539662 KLLNB2CW77 178 aa7.6□□□□□ -1.19
HMGA2-209ENST00000539662 DIRC3C9JPN6 131 aa7.6□□□□□ -1.19
HMGA2-209ENST00000539662 ZNF324O75467 553 aaPredicted RBP7.6□□□□□ -1.19
HMGA2-209ENST00000539662 LY6G6CO95867 125 aa7.6□□□□□ -1.19
HMGA2-209ENST00000539662 TAS2R45P59539 299 aa7.6□□□□□ -1.19
HMGA2-209ENST00000539662 TAS2R60P59551 318 aa7.6□□□□□ -1.19
HMGA2-209ENST00000539662 Q6ZNX1 250 aa7.6□□□□□ -1.19
HMGA2-209ENST00000539662 C2CD4CQ8TF44 421 aa7.6□□□□□ -1.19
HMGA2-209ENST00000539662 LINC00477Q96M19 166 aa7.6□□□□□ -1.19
HMGA2-209ENST00000539662 ODF3Q96PU9 254 aa7.6□□□□□ -1.19
HMGA2-209ENST00000539662 TMPRSS5Q9H3S3 457 aa7.6□□□□□ -1.19
HMGA2-209ENST00000539662 ZNF492Q9P255 531 aa7.6□□□□□ -1.19
HMGA2-209ENST00000539662 RPH3ALQ9UNE2 315 aa7.6□□□□□ -1.19
HMGA2-209ENST00000539662 KLK5Q9Y337 293 aaPredicted RBP7.6□□□□□ -1.19
HMGA2-209ENST00000539662 IGHV4-4A0A075B6R2 117 aa7.59□□□□□ -1.19
HMGA2-209ENST00000539662 TRAV8-1A0A0A6YYK1 113 aa7.59□□□□□ -1.19
HMGA2-209ENST00000539662 BORCS7-ASMTA0A0B4J1R7 106 aa7.59□□□□□ -1.19
HMGA2-209ENST00000539662 TMEM238LA0A1B0GVL6 79 aa7.59□□□□□ -1.19
HMGA2-209ENST00000539662 C7orf71A4D174 169 aa7.59□□□□□ -1.19
HMGA2-209ENST00000539662 TMEM189A5PLL7 270 aa7.59□□□□□ -1.19
HMGA2-209ENST00000539662 JTBO76095 146 aa7.59□□□□□ -1.19
HMGA2-209ENST00000539662 CRISP2P16562 243 aa7.59□□□□□ -1.19
HMGA2-209ENST00000539662 GCHFRP30047 84 aa7.59□□□□□ -1.19
HMGA2-209ENST00000539662 RNASE4P34096 147 aaKnown RBP7.59□□□□□ -1.19
HMGA2-209ENST00000539662 LEPP41159 167 aa7.59□□□□□ -1.19
HMGA2-209ENST00000539662 SERF2P84101 59 aa7.59□□□□□ -1.19
HMGA2-209ENST00000539662 PQLC2Q6ZP29 291 aa7.59□□□□□ -1.19
HMGA2-209ENST00000539662 KCNRGQ8N5I3 272 aa7.59□□□□□ -1.19
HMGA2-209ENST00000539662 SUN5Q8TC36 379 aa7.59□□□□□ -1.19
HMGA2-209ENST00000539662 RNASE8Q8TDE3 154 aaKnown RBP7.59□□□□□ -1.19
HMGA2-209ENST00000539662 TVP23CQ96ET8 276 aa7.59□□□□□ -1.19
HMGA2-209ENST00000539662 SGK494Q96LW2 274 aa7.59□□□□□ -1.19
HMGA2-209ENST00000539662 NIPSNAP3BQ9BS92 247 aa7.59□□□□□ -1.19
HMGA2-209ENST00000539662 TP53TG3Q9ULZ0 132 aa7.59□□□□□ -1.19
HMGA2-209ENST00000539662 EPPK1P58107 5090 aaKnown RBP7.58□□□□□ -1.2
HMGA2-209ENST00000539662 C11orf94C9JXX5 98 aa7.58□□□□□ -1.2
HMGA2-209ENST00000539662 H7BYZ3 331 aa7.58□□□□□ -1.2
HMGA2-209ENST00000539662 DEFB130BP0DP73 79 aa7.58□□□□□ -1.2
HMGA2-209ENST00000539662 DEFB130AP0DP74 79 aa7.58□□□□□ -1.2
HMGA2-209ENST00000539662 HTN3P15516 51 aa7.58□□□□□ -1.2
HMGA2-209ENST00000539662 TSPOP30536 169 aa7.58□□□□□ -1.2
HMGA2-209ENST00000539662 FHITP49789 147 aa7.58□□□□□ -1.2
HMGA2-209ENST00000539662 FGF8P55075 233 aaPredicted RBP7.58□□□□□ -1.2
HMGA2-209ENST00000539662 LYPD1Q8N2G4 141 aa7.58□□□□□ -1.2
HMGA2-209ENST00000539662 TMEM256Q8N2U0 113 aa7.58□□□□□ -1.2
HMGA2-209ENST00000539662 GNPNAT1Q96EK6 184 aaPredicted RBP7.58□□□□□ -1.2
HMGA2-209ENST00000539662 ACTR3CQ9C0K3 210 aaPredicted RBP7.58□□□□□ -1.2
HMGA2-209ENST00000539662 OTORQ9NRC9 128 aa7.58□□□□□ -1.2
HMGA2-209ENST00000539662 DNAH10Q8IVF4 4471 aa7.57□□□□□ -1.2
HMGA2-209ENST00000539662 HMSDA8MTL9 139 aa7.57□□□□□ -1.2
HMGA2-209ENST00000539662 TAAR5O14804 337 aa7.57□□□□□ -1.2
HMGA2-209ENST00000539662 SLC25A5P05141 298 aaKnown RBP7.57□□□□□ -1.2
HMGA2-209ENST00000539662 GPX1P07203 203 aa7.57□□□□□ -1.2
HMGA2-209ENST00000539662 ZNF138P52744 262 aa7.57□□□□□ -1.2
HMGA2-209ENST00000539662 DAD1P61803 113 aa7.57□□□□□ -1.2
HMGA2-209ENST00000539662 TMEM78Q5T7P6 136 aa7.57□□□□□ -1.2
HMGA2-209ENST00000539662 GOLT1AQ6ZVE7 132 aa7.57□□□□□ -1.2
HMGA2-209ENST00000539662 C20orf144Q9BQM9 153 aa7.57□□□□□ -1.2
HMGA2-209ENST00000539662 NOP10Q9NPE3 64 aaKnown RBP7.57□□□□□ -1.2
HMGA2-209ENST00000539662 GGTLC3B5MD39 225 aa7.56□□□□□ -1.2
HMGA2-209ENST00000539662 MBP02144 154 aa7.56□□□□□ -1.2
HMGA2-209ENST00000539662 CSN1S1P47710 185 aa7.56□□□□□ -1.2
HMGA2-209ENST00000539662 ZNF345Q14585 488 aa7.56□□□□□ -1.2
HMGA2-209ENST00000539662 C4orf48Q5BLP8 95 aa7.56□□□□□ -1.2
HMGA2-209ENST00000539662 IQCF2Q8IXL9 164 aa7.56□□□□□ -1.2
HMGA2-209ENST00000539662 C11orf72Q8NBR9 251 aa7.56□□□□□ -1.2
HMGA2-209ENST00000539662 TMEM263Q8WUH6 116 aaKnown RBP7.56□□□□□ -1.2
HMGA2-209ENST00000539662 C16orf74Q96GX8 76 aa7.56□□□□□ -1.2
HMGA2-209ENST00000539662 GSN-AS1Q9NRJ2 163 aa7.56□□□□□ -1.2
HMGA2-209ENST00000539662 DNAH6Q9C0G6 4158 aa7.56□□□□□ -1.2
HMGA2-209ENST00000539662 CTXND1A0A1B0GTU2 59 aa7.55□□□□□ -1.2
HMGA2-209ENST00000539662 A0A1B0GVG6 124 aa7.55□□□□□ -1.2
HMGA2-209ENST00000539662 RBAKDNA6NC62 111 aa7.55□□□□□ -1.2
HMGA2-209ENST00000539662 LYRM9A8MSI8 78 aa7.55□□□□□ -1.2
HMGA2-209ENST00000539662 F6UZH7 168 aa7.55□□□□□ -1.2
HMGA2-209ENST00000539662 BCL2L11O43521 198 aa7.55□□□□□ -1.2
HMGA2-209ENST00000539662 CXorf1O96002 111 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms