RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 BRD3OSQ6XYD6 125 aa10.88□□□□□ -0.67
UBE3B-210ENST00000539599 MRPL52Q86TS9 123 aaKnown RBP10.88□□□□□ -0.67
UBE3B-210ENST00000539599 CCDC140Q96MF4 163 aa10.88□□□□□ -0.67
UBE3B-210ENST00000539599 PRELID3AQ96N28 172 aa10.88□□□□□ -0.67
UBE3B-210ENST00000539599 ZNF747Q9BV97 191 aa10.88□□□□□ -0.67
UBE3B-210ENST00000539599 TRBV6-1A0A0K0K1D8 114 aa10.88□□□□□ -0.67
UBE3B-210ENST00000539599 RPL7P18124 248 aaKnown RBP10.88□□□□□ -0.67
UBE3B-210ENST00000539599 CCDC144NLQ6NUI1 221 aa10.87□□□□□ -0.67
UBE3B-210ENST00000539599 MRPS16Q9Y3D3 137 aaKnown RBP10.87□□□□□ -0.67
UBE3B-210ENST00000539599 USP9XQ93008 2570 aaPredicted RBP10.87□□□□□ -0.67
UBE3B-210ENST00000539599 FAM104BQ5XKR9 115 aa10.87□□□□□ -0.67
UBE3B-210ENST00000539599 C18orf15Q96N68 181 aa10.87□□□□□ -0.67
UBE3B-210ENST00000539599 TMEM191AQ9H0A3 160 aa10.87□□□□□ -0.67
UBE3B-210ENST00000539599 THYN1Q9P016 225 aa10.87□□□□□ -0.67
UBE3B-210ENST00000539599 PDE6HQ13956 83 aa10.86□□□□□ -0.67
UBE3B-210ENST00000539599 PRSS57Q6UWY2 283 aa10.86□□□□□ -0.67
UBE3B-210ENST00000539599 ZFAND3Q9H8U3 227 aa10.86□□□□□ -0.67
UBE3B-210ENST00000539599 C11orf21Q9P2W6 132 aa10.86□□□□□ -0.67
UBE3B-210ENST00000539599 RNF24Q9Y225 148 aa10.86□□□□□ -0.67
UBE3B-210ENST00000539599 IGHV2-70DA0A0C4DH43 119 aa10.86□□□□□ -0.67
UBE3B-210ENST00000539599 CLPSL1A2RUU4 121 aa10.86□□□□□ -0.67
UBE3B-210ENST00000539599 DTX2Q86UW9 622 aa10.86□□□□□ -0.67
UBE3B-210ENST00000539599 FER1L6-AS1Q8NA97 138 aa10.86□□□□□ -0.67
UBE3B-210ENST00000539599 ZNF502Q8TBZ5 544 aa10.86□□□□□ -0.67
UBE3B-210ENST00000539599 SCRT2Q9NQ03 307 aa10.86□□□□□ -0.67
UBE3B-210ENST00000539599 PSG9Q00887 426 aa10.85□□□□□ -0.67
UBE3B-210ENST00000539599 ANKRD39Q53RE8 183 aa10.85□□□□□ -0.67
UBE3B-210ENST00000539599 LCNL1Q6ZST4 164 aa10.85□□□□□ -0.67
UBE3B-210ENST00000539599 ZFYVE26Q68DK2 2539 aa10.85□□□□□ -0.67
UBE3B-210ENST00000539599 C20orf202A1L168 122 aa10.85□□□□□ -0.67
UBE3B-210ENST00000539599 CBY3A6NI87 242 aa10.85□□□□□ -0.67
UBE3B-210ENST00000539599 CACNG7P62955 275 aa10.85□□□□□ -0.67
UBE3B-210ENST00000539599 GAGE1Q13065 139 aa10.85□□□□□ -0.67
UBE3B-210ENST00000539599 EBI3Q14213 229 aa10.85□□□□□ -0.67
UBE3B-210ENST00000539599 IGF1P05019 195 aa10.84□□□□□ -0.67
UBE3B-210ENST00000539599 CKS2P33552 79 aa10.84□□□□□ -0.67
UBE3B-210ENST00000539599 LMO4P61968 165 aa10.84□□□□□ -0.67
UBE3B-210ENST00000539599 SLC25A34Q6PIV7 304 aa10.84□□□□□ -0.67
UBE3B-210ENST00000539599 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.84□□□□□ -0.67
UBE3B-210ENST00000539599 HSPB8Q9UJY1 196 aa10.84□□□□□ -0.67
UBE3B-210ENST00000539599 BUB3O43684 328 aa10.84□□□□□ -0.67
UBE3B-210ENST00000539599 TRBV12-3P01733 135 aa10.84□□□□□ -0.67
UBE3B-210ENST00000539599 PTTG1IPP53801 180 aa10.84□□□□□ -0.67
UBE3B-210ENST00000539599 LINC01545Q5VT33 79 aa10.84□□□□□ -0.67
UBE3B-210ENST00000539599 OR10AG1Q8NH19 301 aa10.84□□□□□ -0.67
UBE3B-210ENST00000539599 COX11Q9Y6N1 276 aa10.84□□□□□ -0.67
UBE3B-210ENST00000539599 PIEZO1Q92508 2521 aa10.84□□□□□ -0.67
UBE3B-210ENST00000539599 USP9YO00507 2555 aaPredicted RBP10.84□□□□□ -0.67
UBE3B-210ENST00000539599 MYO18BQ8IUG5 2567 aa10.84□□□□□ -0.67
UBE3B-210ENST00000539599 IGKV3-7A0A075B6H7 116 aa10.83□□□□□ -0.68
UBE3B-210ENST00000539599 HSBP1L1C9JCN9 74 aa10.83□□□□□ -0.68
UBE3B-210ENST00000539599 PET117Q6UWS5 81 aa10.83□□□□□ -0.68
UBE3B-210ENST00000539599 ZNF493Q6ZR52 646 aa10.83□□□□□ -0.68
UBE3B-210ENST00000539599 ORMDL3Q8N138 153 aa10.83□□□□□ -0.68
UBE3B-210ENST00000539599 ST20Q9HBF5 79 aa10.83□□□□□ -0.68
UBE3B-210ENST00000539599 TRAV26-2A0A0B4J265 109 aa10.83□□□□□ -0.68
UBE3B-210ENST00000539599 TRGV3P03979 118 aa10.83□□□□□ -0.68
UBE3B-210ENST00000539599 MINOS1Q5TGZ0 78 aa10.83□□□□□ -0.68
UBE3B-210ENST00000539599 ZNF48Q96MX3 618 aaPredicted RBP10.83□□□□□ -0.68
UBE3B-210ENST00000539599 MINOS1-NBL1R4GNA1 71 aa10.83□□□□□ -0.68
UBE3B-210ENST00000539599 DOPEY2Q9Y3R5 2298 aa10.83□□□□□ -0.68
UBE3B-210ENST00000539599 LY6EQ16553 131 aa10.82□□□□□ -0.68
UBE3B-210ENST00000539599 FAM110DQ8TAY7 271 aaPredicted RBP10.82□□□□□ -0.68
UBE3B-210ENST00000539599 CENPVL3A0A0U1RRI6 287 aa10.82□□□□□ -0.68
UBE3B-210ENST00000539599 GNLYP22749 145 aa10.82□□□□□ -0.68
UBE3B-210ENST00000539599 UBE2E1P51965 193 aa10.82□□□□□ -0.68
UBE3B-210ENST00000539599 NHLH1Q02575 133 aa10.82□□□□□ -0.68
UBE3B-210ENST00000539599 BVES-AS1Q5T3Y7 98 aa10.82□□□□□ -0.68
UBE3B-210ENST00000539599 RNF185Q96GF1 192 aa10.82□□□□□ -0.68
UBE3B-210ENST00000539599 PSMG3-AS1Q96PY0 264 aa10.82□□□□□ -0.68
UBE3B-210ENST00000539599 AGPAT4-IT1Q9H0P7 198 aa10.82□□□□□ -0.68
UBE3B-210ENST00000539599 IGSF10Q6WRI0 2623 aa10.82□□□□□ -0.68
UBE3B-210ENST00000539599 TRAV8-2A0A0B4J237 113 aa10.82□□□□□ -0.68
UBE3B-210ENST00000539599 IGKV3D-20A0A0C4DH25 116 aa10.82□□□□□ -0.68
UBE3B-210ENST00000539599 IGLC6P0CF74 106 aa10.82□□□□□ -0.68
UBE3B-210ENST00000539599 GATD1Q8NB37 220 aa10.82□□□□□ -0.68
UBE3B-210ENST00000539599 NAA38Q9BRA0 125 aaKnown RBP10.82□□□□□ -0.68
UBE3B-210ENST00000539599 TTTY13Q9BZ97 58 aa10.82□□□□□ -0.68
UBE3B-210ENST00000539599 DKK2Q9UBU2 259 aa10.82□□□□□ -0.68
UBE3B-210ENST00000539599 CACNA1AO00555 2505 aa10.81□□□□□ -0.68
UBE3B-210ENST00000539599 SAPCD1Q5SSQ6 148 aa10.81□□□□□ -0.68
UBE3B-210ENST00000539599 C2orf91Q6ZV80 131 aa10.81□□□□□ -0.68
UBE3B-210ENST00000539599 NPFFO15130 113 aa10.81□□□□□ -0.68
UBE3B-210ENST00000539599 IGHV3-11P01762 117 aa10.81□□□□□ -0.68
UBE3B-210ENST00000539599 C1orf122Q6ZSJ8 110 aa10.81□□□□□ -0.68
UBE3B-210ENST00000539599 TAX1BP3O14907 124 aa10.8□□□□□ -0.68
UBE3B-210ENST00000539599 EFNA4P52798 201 aa10.8□□□□□ -0.68
UBE3B-210ENST00000539599 Q6AWC8 147 aa10.8□□□□□ -0.68
UBE3B-210ENST00000539599 UNQ9165/PRO28630Q6UXU0 137 aa10.8□□□□□ -0.68
UBE3B-210ENST00000539599 TRAV40A0A0B4J280 105 aa10.8□□□□□ -0.68
UBE3B-210ENST00000539599 PRR9Q5T870 116 aa10.8□□□□□ -0.68
UBE3B-210ENST00000539599 Q6ZS46 218 aa10.8□□□□□ -0.68
UBE3B-210ENST00000539599 ZNF738Q8NE65 137 aa10.8□□□□□ -0.68
UBE3B-210ENST00000539599 RNASE8Q8TDE3 154 aaKnown RBP10.8□□□□□ -0.68
UBE3B-210ENST00000539599 U3KQK5 164 aa10.8□□□□□ -0.68
UBE3B-210ENST00000539599 IGHV4-39P01824 125 aa10.79□□□□□ -0.68
UBE3B-210ENST00000539599 FOSL1P15407 271 aa10.79□□□□□ -0.68
UBE3B-210ENST00000539599 VAMP3Q15836 100 aa10.79□□□□□ -0.68
UBE3B-210ENST00000539599 ITLN2Q8WWU7 325 aaPredicted RBP10.79□□□□□ -0.68
UBE3B-210ENST00000539599 EDN2P20800 178 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms