RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 HSD17B11Q8NBQ5 300 aa11.09□□□□□ -0.63
CIT-210ENST00000539413 TMEM263Q8WUH6 116 aaKnown RBP11.09□□□□□ -0.63
CIT-210ENST00000539413 ASB13Q8WXK3 278 aa11.09□□□□□ -0.63
CIT-210ENST00000539413 VGLL1Q99990 258 aa11.09□□□□□ -0.63
CIT-210ENST00000539413 KLLNB2CW77 178 aa11.08□□□□□ -0.64
CIT-210ENST00000539413 SLC25A5P05141 298 aaKnown RBP11.08□□□□□ -0.64
CIT-210ENST00000539413 CD300CQ08708 224 aa11.08□□□□□ -0.64
CIT-210ENST00000539413 BTN1A1Q13410 526 aa11.08□□□□□ -0.64
CIT-210ENST00000539413 Q9H3A6 140 aa11.08□□□□□ -0.64
CIT-210ENST00000539413 TIMM8BQ9Y5J9 83 aaPredicted RBP11.08□□□□□ -0.64
CIT-210ENST00000539413 A0A1W2PPV4 95 aa11.07□□□□□ -0.64
CIT-210ENST00000539413 C7orf71A4D174 169 aa11.07□□□□□ -0.64
CIT-210ENST00000539413 RNF222A6NCQ9 220 aa11.07□□□□□ -0.64
CIT-210ENST00000539413 TMEM78Q5T7P6 136 aa11.07□□□□□ -0.64
CIT-210ENST00000539413 CCDC28AQ8IWP9 274 aa11.07□□□□□ -0.64
CIT-210ENST00000539413 LYPD1Q8N2G4 141 aa11.07□□□□□ -0.64
CIT-210ENST00000539413 OR10G4Q8NGN3 311 aa11.07□□□□□ -0.64
CIT-210ENST00000539413 OR10G9Q8NGN4 311 aa11.07□□□□□ -0.64
CIT-210ENST00000539413 OR10G7Q8NGN6 311 aa11.07□□□□□ -0.64
CIT-210ENST00000539413 FAM210BQ96KR6 192 aa11.07□□□□□ -0.64
CIT-210ENST00000539413 NOP10Q9NPE3 64 aaKnown RBP11.07□□□□□ -0.64
CIT-210ENST00000539413 FXYD6-FXYD2A0A087WZ82 144 aa11.06□□□□□ -0.64
CIT-210ENST00000539413 HMGB3O15347 200 aaKnown RBP11.06□□□□□ -0.64
CIT-210ENST00000539413 CRISP2P16562 243 aa11.06□□□□□ -0.64
CIT-210ENST00000539413 ATP6V0CP27449 155 aa11.06□□□□□ -0.64
CIT-210ENST00000539413 PRR9Q5T870 116 aa11.06□□□□□ -0.64
CIT-210ENST00000539413 TMEM88Q6PEY1 159 aa11.06□□□□□ -0.64
CIT-210ENST00000539413 ZFAND2AQ8N6M9 145 aa11.06□□□□□ -0.64
CIT-210ENST00000539413 INO80EQ8NBZ0 244 aaPredicted RBP11.06□□□□□ -0.64
CIT-210ENST00000539413 OR2T35Q8NGX2 323 aa11.06□□□□□ -0.64
CIT-210ENST00000539413 Q8TAT8 98 aa11.06□□□□□ -0.64
CIT-210ENST00000539413 PYGO2Q9BRQ0 406 aa11.06□□□□□ -0.64
CIT-210ENST00000539413 ZNF492Q9P255 531 aa11.06□□□□□ -0.64
CIT-210ENST00000539413 G3V3Q6 166 aa11.05□□□□□ -0.64
CIT-210ENST00000539413 ZNF324O75467 553 aaPredicted RBP11.05□□□□□ -0.64
CIT-210ENST00000539413 GPX1P07203 203 aa11.05□□□□□ -0.64
CIT-210ENST00000539413 P0DMU3 169 aa11.05□□□□□ -0.64
CIT-210ENST00000539413 FAM231AP0DMU4 169 aa11.05□□□□□ -0.64
CIT-210ENST00000539413 FAM231CP0DMU5 169 aa11.05□□□□□ -0.64
CIT-210ENST00000539413 RNASE4P34096 147 aaKnown RBP11.05□□□□□ -0.64
CIT-210ENST00000539413 CSN1S1P47710 185 aa11.05□□□□□ -0.64
CIT-210ENST00000539413 ZNF138P52744 262 aa11.05□□□□□ -0.64
CIT-210ENST00000539413 KMT2AQ03164 3969 aa11.05□□□□□ -0.64
CIT-210ENST00000539413 PQLC2Q6ZP29 291 aa11.05□□□□□ -0.64
CIT-210ENST00000539413 OR2G3Q8NGZ4 309 aa11.05□□□□□ -0.64
CIT-210ENST00000539413 PSMG3Q9BT73 122 aaPredicted RBP11.05□□□□□ -0.64
CIT-210ENST00000539413 SH3BGRL3Q9H299 93 aa11.05□□□□□ -0.64
CIT-210ENST00000539413 TNFSF18Q9UNG2 199 aa11.05□□□□□ -0.64
CIT-210ENST00000539413 CBY3A6NI87 242 aa11.04□□□□□ -0.64
CIT-210ENST00000539413 NMBP08949 121 aa11.04□□□□□ -0.64
CIT-210ENST00000539413 CDC34P49427 236 aaPredicted RBP11.04□□□□□ -0.64
CIT-210ENST00000539413 HYLS1Q96M11 299 aa11.04□□□□□ -0.64
CIT-210ENST00000539413 RBAKDNA6NC62 111 aa11.03□□□□□ -0.64
CIT-210ENST00000539413 PGPA6NDG6 321 aa11.03□□□□□ -0.64
CIT-210ENST00000539413 SNURFLB1AK76 121 aa11.03□□□□□ -0.64
CIT-210ENST00000539413 DIRC3C9JPN6 131 aa11.03□□□□□ -0.64
CIT-210ENST00000539413 F5H768 121 aa11.03□□□□□ -0.64
CIT-210ENST00000539413 ATP5G1P05496 136 aa11.03□□□□□ -0.64
CIT-210ENST00000539413 ATP5G3P48201 142 aa11.03□□□□□ -0.64
CIT-210ENST00000539413 RPL7L1Q6DKI1 246 aaKnown RBP11.03□□□□□ -0.64
CIT-210ENST00000539413 Q6ZQT7 251 aa11.03□□□□□ -0.64
CIT-210ENST00000539413 LINC00612Q8N6U2 182 aa11.03□□□□□ -0.64
CIT-210ENST00000539413 POM121L12Q8N7R1 296 aa11.03□□□□□ -0.64
CIT-210ENST00000539413 OTORQ9NRC9 128 aa11.03□□□□□ -0.64
CIT-210ENST00000539413 STAG3L2P0CL84 134 aa11.02□□□□□ -0.65
CIT-210ENST00000539413 STAG3L3P0CL85 134 aa11.02□□□□□ -0.65
CIT-210ENST00000539413 ARL14EPLP0DKL9 152 aa11.02□□□□□ -0.65
CIT-210ENST00000539413 SERF2P84101 59 aa11.02□□□□□ -0.65
CIT-210ENST00000539413 EIF4E3Q8N5X7 224 aaKnown RBP11.02□□□□□ -0.65
CIT-210ENST00000539413 RXFP4Q8TDU9 374 aa11.02□□□□□ -0.65
CIT-210ENST00000539413 RAB24Q969Q5 203 aa11.02□□□□□ -0.65
CIT-210ENST00000539413 LINC00467Q9BRT7 94 aa11.02□□□□□ -0.65
CIT-210ENST00000539413 RPH3ALQ9UNE2 315 aa11.02□□□□□ -0.65
CIT-210ENST00000539413 TRBV7-9A0A0J9YWB2 115 aa11.01□□□□□ -0.65
CIT-210ENST00000539413 GAGE12BA1L429 117 aa11.01□□□□□ -0.65
CIT-210ENST00000539413 GAGE7O76087 117 aa11.01□□□□□ -0.65
CIT-210ENST00000539413 GAGE12FP0CL80 117 aa11.01□□□□□ -0.65
CIT-210ENST00000539413 GAGE12GP0CL81 117 aa11.01□□□□□ -0.65
CIT-210ENST00000539413 GAGE12IP0CL82 117 aa11.01□□□□□ -0.65
CIT-210ENST00000539413 C11orf72Q8NBR9 251 aa11.01□□□□□ -0.65
CIT-210ENST00000539413 CMTM2Q8TAZ6 248 aa11.01□□□□□ -0.65
CIT-210ENST00000539413 GSN-AS1Q9NRJ2 163 aa11.01□□□□□ -0.65
CIT-210ENST00000539413 BORCS7-ASMTA0A0B4J1R7 106 aa11□□□□□ -0.65
CIT-210ENST00000539413 SMLR1H3BR10 107 aa11□□□□□ -0.65
CIT-210ENST00000539413 ARPC5O15511 151 aa11□□□□□ -0.65
CIT-210ENST00000539413 MBP02144 154 aa11□□□□□ -0.65
CIT-210ENST00000539413 DAZ2Q13117 558 aaKnown RBP11□□□□□ -0.65
CIT-210ENST00000539413 ANXA2RQ3ZCQ2 193 aa11□□□□□ -0.65
CIT-210ENST00000539413 FAM74A1Q5RGS3 127 aa11□□□□□ -0.65
CIT-210ENST00000539413 UBE2DNLQ8IWF7 75 aa11□□□□□ -0.65
CIT-210ENST00000539413 C15orf53Q8NAA6 179 aa11□□□□□ -0.65
CIT-210ENST00000539413 ZNF680Q8NEM1 530 aa11□□□□□ -0.65
CIT-210ENST00000539413 GNPNAT1Q96EK6 184 aaPredicted RBP11□□□□□ -0.65
CIT-210ENST00000539413 TP53TG3Q9ULZ0 132 aa11□□□□□ -0.65
CIT-210ENST00000539413 IGHV1OR15-1A0A075B7D0 117 aa10.99□□□□□ -0.65
CIT-210ENST00000539413 RGS13O14921 159 aa10.99□□□□□ -0.65
CIT-210ENST00000539413 GCHFRP30047 84 aa10.99□□□□□ -0.65
CIT-210ENST00000539413 GNG5P63218 68 aa10.99□□□□□ -0.65
CIT-210ENST00000539413 Q6ZTI0 123 aa10.99□□□□□ -0.65
CIT-210ENST00000539413 GOLT1AQ6ZVE7 132 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms