RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 PHLDA3Q9Y5J5 127 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 ZFC3H1O60293 1989 aaKnown RBP0.48□□□□□ -2.33
HIF1A-204ENST00000539097 TNRC6AQ8NDV7 1962 aaKnown RBP0.48□□□□□ -2.33
HIF1A-204ENST00000539097 C5orf42Q9H799 3197 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 NCOA6Q14686 2063 aaPredicted RBP0.48□□□□□ -2.33
HIF1A-204ENST00000539097 CDH23Q9H251 3354 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 LRP1BQ9NZR2 4599 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 STAB1Q9NY15 2570 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 PRRC2CQ9Y520 2896 aaKnown RBP0.48□□□□□ -2.33
HIF1A-204ENST00000539097 OR51F1A6NGY5 319 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 C17orf98A8MV24 154 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 C10orf142B7Z368 130 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 C3orf84H3BNL1 204 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 TXNDC9O14530 226 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 CST8O60676 142 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 CXorf1O96002 111 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 METTL15P1P0C7V9 234 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 IGLC6P0CF74 106 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 OGNP20774 298 aaKnown RBP0.48□□□□□ -2.33
HIF1A-204ENST00000539097 EVI2AP22794 236 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 PHBP35232 272 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 FOXA3P55318 350 aaPredicted RBP0.48□□□□□ -2.33
HIF1A-204ENST00000539097 CKS1BP61024 79 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 DCDP81605 110 aaKnown RBP0.48□□□□□ -2.33
HIF1A-204ENST00000539097 SMCO1Q147U7 214 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 CDK10Q15131 360 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 SS18Q15532 418 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 OR8B8Q15620 311 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 KRTAP21-2Q3LI59 83 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 NXNL2Q5VZ03 156 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 HRCT1Q6UXD1 115 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 UNQ6190/PRO20217Q6UXQ8 127 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 ATP5L2Q7Z4Y8 100 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 ATOH7Q8N100 152 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 EIF4E3Q8N5X7 224 aaKnown RBP0.48□□□□□ -2.33
HIF1A-204ENST00000539097 CYGBQ8WWM9 190 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 TOMM6Q96B49 74 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 LINC01600Q96MT4 127 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 AIF1LQ9BQI0 150 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 LINC00470Q9BZP3 86 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 GABARAPL1Q9H0R8 117 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 UQCC1Q9NVA1 299 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 PAIP2BQ9ULR5 123 aaKnown RBP0.48□□□□□ -2.33
HIF1A-204ENST00000539097 WASHC3Q9Y3C0 194 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 LINC00312Q9Y6C7 94 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 UNC13CQ8NB66 2214 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 INTS1Q8N201 2190 aaKnown RBP0.48□□□□□ -2.33
HIF1A-204ENST00000539097 FAM208BQ5VWN6 2430 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 PIK3C2BO00750 1634 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 ZZEF1O43149 2961 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 XIRP2A4UGR9 3374 aa0.48□□□□□ -2.33
HIF1A-204ENST00000539097 IGHV3-73A0A0B4J1V6 119 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 TRAV41A0A0B4J266 112 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 A0A1W2PNM2 257 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 EFCAB9A8MZ26 197 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 BUB1B-PAK6H3BSN5 160 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 CORTO00230 105 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 MPC2O95563 127 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 NAPSAO96009 420 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 PET100P0DJ07 73 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 SLC25A16P16260 332 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 S100A11P31949 105 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 GABRA2P47869 451 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 MRPS25P82663 173 aaKnown RBP0.47□□□□□ -2.33
HIF1A-204ENST00000539097 HTR4Q13639 388 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 KISS1Q15726 138 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 CST6Q15828 149 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 ZNF826PQ6ZT77 177 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 BAP18Q8IXM2 172 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 C1orf174Q8IYL3 243 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 TERB2Q8NHR7 220 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 CANT1Q8WVQ1 401 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 SLAMF6Q96DU3 332 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 MALSU1Q96EH3 234 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 C20orf166-AS1Q96NR2 134 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 CBLN4Q9NTU7 201 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 TNFSF18Q9UNG2 199 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 CYSLTR1Q9Y271 337 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 MPC1Q9Y5U8 109 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 RRBP1Q9P2E9 1410 aaKnown RBP0.47□□□□□ -2.33
HIF1A-204ENST00000539097 CELSR2Q9HCU4 2923 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 CEP192Q8TEP8 1941 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 IGKV3D-11A0A0A0MRZ8 115 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 IGKV2-24A0A0C4DH68 120 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 ZNF860A6NHJ4 632 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 C9JAW5 83 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 INE1O15225 51 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 FAM107AO95990 144 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 HRASP01112 189 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 KRASP01116 189 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 PRB4P10163 310 aaPredicted RBP0.47□□□□□ -2.33
HIF1A-204ENST00000539097 TSNQ15631 228 aaKnown RBP0.47□□□□□ -2.33
HIF1A-204ENST00000539097 TRIQKQ629K1 86 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 DCUN1D2Q6PH85 259 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 RPS19BP1Q86WX3 136 aaKnown RBP0.47□□□□□ -2.33
HIF1A-204ENST00000539097 C9orf163Q8N9P6 203 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 LINC00304Q8N9R0 145 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 OR51A2Q8NGJ7 313 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 RPS4Y2Q8TD47 263 aa0.47□□□□□ -2.33
HIF1A-204ENST00000539097 MBD3L1Q8WWY6 194 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms