RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 SDF2L1Q9HCN8 221 aa11.56□□□□□ -0.56
VAMP1-207ENST00000539047 PPP1R14DQ9NXH3 145 aa11.56□□□□□ -0.56
VAMP1-207ENST00000539047 ZFP30Q9Y2G7 519 aa11.56□□□□□ -0.56
VAMP1-207ENST00000539047 B4DEV8 164 aa11.55□□□□□ -0.56
VAMP1-207ENST00000539047 DUSP14O95147 198 aaKnown RBP11.55□□□□□ -0.56
VAMP1-207ENST00000539047 LTAP01374 205 aa11.55□□□□□ -0.56
VAMP1-207ENST00000539047 HIST1H1AQ02539 215 aaPredicted RBP11.55□□□□□ -0.56
VAMP1-207ENST00000539047 RHEBQ15382 184 aa11.55□□□□□ -0.56
VAMP1-207ENST00000539047 OR8A1Q8NGG7 326 aa11.55□□□□□ -0.56
VAMP1-207ENST00000539047 IGF2BP2-AS1Q96M15 143 aa11.55□□□□□ -0.56
VAMP1-207ENST00000539047 LINC00479Q96M42 142 aa11.55□□□□□ -0.56
VAMP1-207ENST00000539047 TRAV8-1A0A0A6YYK1 113 aa11.54□□□□□ -0.56
VAMP1-207ENST00000539047 ZNF138P52744 262 aa11.54□□□□□ -0.56
VAMP1-207ENST00000539047 FOXI2Q6ZQN5 318 aa11.54□□□□□ -0.56
VAMP1-207ENST00000539047 C9orf47Q6ZRZ4 202 aa11.54□□□□□ -0.56
VAMP1-207ENST00000539047 LINC01551Q86U37 167 aa11.54□□□□□ -0.56
VAMP1-207ENST00000539047 CLRN3Q8NCR9 226 aa11.54□□□□□ -0.56
VAMP1-207ENST00000539047 SGK494Q96LW2 274 aa11.54□□□□□ -0.56
VAMP1-207ENST00000539047 LINC00477Q96M19 166 aa11.54□□□□□ -0.56
VAMP1-207ENST00000539047 TRBV20OR9-2A0A075B6H5 130 aa11.53□□□□□ -0.56
VAMP1-207ENST00000539047 OR11H12B2RN74 326 aa11.53□□□□□ -0.56
VAMP1-207ENST00000539047 PRAC2D3DTV9 90 aa11.53□□□□□ -0.56
VAMP1-207ENST00000539047 NPIPB6E9PJ23 425 aa11.53□□□□□ -0.56
VAMP1-207ENST00000539047 DEFB131AP59861 70 aa11.53□□□□□ -0.56
VAMP1-207ENST00000539047 RPL23P62829 140 aaKnown RBP11.53□□□□□ -0.56
VAMP1-207ENST00000539047 TMEM183AQ8IXX5 376 aa11.53□□□□□ -0.56
VAMP1-207ENST00000539047 FAM24BQ8N5W8 94 aa11.53□□□□□ -0.56
VAMP1-207ENST00000539047 C15orf54Q8N8G6 183 aa11.53□□□□□ -0.56
VAMP1-207ENST00000539047 VGLL1Q99990 258 aa11.53□□□□□ -0.56
VAMP1-207ENST00000539047 MAP6D1Q9H9H5 199 aa11.53□□□□□ -0.56
VAMP1-207ENST00000539047 LENEPQ9Y5L5 61 aa11.53□□□□□ -0.56
VAMP1-207ENST00000539047 IZUMO1RA6ND01 250 aa11.52□□□□□ -0.57
VAMP1-207ENST00000539047 IGLV2-11P01706 119 aa11.52□□□□□ -0.57
VAMP1-207ENST00000539047 MT-ND4LP03901 98 aa11.52□□□□□ -0.57
VAMP1-207ENST00000539047 PRR31Q5SQ13 230 aa11.52□□□□□ -0.57
VAMP1-207ENST00000539047 GTSCR1Q86UQ5 136 aa11.52□□□□□ -0.57
VAMP1-207ENST00000539047 NHLRC2Q8NBF2 726 aa11.52□□□□□ -0.57
VAMP1-207ENST00000539047 WFDC9Q8NEX5 89 aa11.52□□□□□ -0.57
VAMP1-207ENST00000539047 Q8TAT8 98 aa11.52□□□□□ -0.57
VAMP1-207ENST00000539047 SAV1Q9H4B6 383 aaPredicted RBP11.52□□□□□ -0.57
VAMP1-207ENST00000539047 ZMAT5Q9UDW3 170 aaKnown RBP11.52□□□□□ -0.57
VAMP1-207ENST00000539047 ZNF256Q9Y2P7 627 aaPredicted RBP11.52□□□□□ -0.57
VAMP1-207ENST00000539047 PGPEP1LA6NFU8 196 aa11.51□□□□□ -0.57
VAMP1-207ENST00000539047 PPP1R2P9O14990 202 aa11.51□□□□□ -0.57
VAMP1-207ENST00000539047 ERCC8Q13216 396 aa11.51□□□□□ -0.57
VAMP1-207ENST00000539047 PRR27Q6MZM9 219 aa11.51□□□□□ -0.57
VAMP1-207ENST00000539047 OCC1Q8TAD7 63 aa11.51□□□□□ -0.57
VAMP1-207ENST00000539047 DAZAP1Q96EP5 407 aaKnown RBP11.51□□□□□ -0.57
VAMP1-207ENST00000539047 FAM110AQ9BQ89 295 aa11.51□□□□□ -0.57
VAMP1-207ENST00000539047 RPS10P5Q9NQ39 176 aa11.51□□□□□ -0.57
VAMP1-207ENST00000539047 ZNF492Q9P255 531 aa11.51□□□□□ -0.57
VAMP1-207ENST00000539047 TRBV7-9A0A0J9YWB2 115 aa11.5□□□□□ -0.57
VAMP1-207ENST00000539047 A0A0J9YX75 114 aa11.5□□□□□ -0.57
VAMP1-207ENST00000539047 PRB4P10163 310 aaPredicted RBP11.5□□□□□ -0.57
VAMP1-207ENST00000539047 TSPOP30536 169 aa11.5□□□□□ -0.57
VAMP1-207ENST00000539047 LEPP41159 167 aa11.5□□□□□ -0.57
VAMP1-207ENST00000539047 ERVFC1-1P60608 527 aa11.5□□□□□ -0.57
VAMP1-207ENST00000539047 SMUG1Q53HV7 270 aa11.5□□□□□ -0.57
VAMP1-207ENST00000539047 OR4B1Q8NGF8 309 aa11.5□□□□□ -0.57
VAMP1-207ENST00000539047 ISOC2Q96AB3 205 aa11.5□□□□□ -0.57
VAMP1-207ENST00000539047 ODF3Q96PU9 254 aa11.5□□□□□ -0.57
VAMP1-207ENST00000539047 PRR25Q96S07 402 aa11.5□□□□□ -0.57
VAMP1-207ENST00000539047 AGPAT4-IT1Q9H0P7 198 aa11.5□□□□□ -0.57
VAMP1-207ENST00000539047 AURKAIP1Q9NWT8 199 aaPredicted RBP11.5□□□□□ -0.57
VAMP1-207ENST00000539047 F6UB75 175 aa11.49□□□□□ -0.57
VAMP1-207ENST00000539047 GCGP01275 180 aa11.49□□□□□ -0.57
VAMP1-207ENST00000539047 ZNF705DP0CH99 300 aaPredicted RBP11.49□□□□□ -0.57
VAMP1-207ENST00000539047 ZNF705BP0CI00 300 aaPredicted RBP11.49□□□□□ -0.57
VAMP1-207ENST00000539047 IGLL1P15814 213 aa11.49□□□□□ -0.57
VAMP1-207ENST00000539047 BEAN1Q3B7T3 259 aa11.49□□□□□ -0.57
VAMP1-207ENST00000539047 ACTL10Q5JWF8 245 aa11.49□□□□□ -0.57
VAMP1-207ENST00000539047 ANAPC16Q96DE5 110 aa11.49□□□□□ -0.57
VAMP1-207ENST00000539047 SFRP2Q96HF1 295 aa11.49□□□□□ -0.57
VAMP1-207ENST00000539047 CTDSP1Q9GZU7 261 aa11.49□□□□□ -0.57
VAMP1-207ENST00000539047 C7orf77A4D0Y5 90 aa11.48□□□□□ -0.57
VAMP1-207ENST00000539047 HLA-DRB4P13762 266 aa11.48□□□□□ -0.57
VAMP1-207ENST00000539047 ODF3L2Q3SX64 289 aa11.48□□□□□ -0.57
VAMP1-207ENST00000539047 IBA57Q5T440 356 aaKnown RBP11.48□□□□□ -0.57
VAMP1-207ENST00000539047 STHQ8IWL8 128 aa11.48□□□□□ -0.57
VAMP1-207ENST00000539047 HLA-DRB4X5D2U9 266 aa11.48□□□□□ -0.57
VAMP1-207ENST00000539047 A0A087WWC5 75 aa11.47□□□□□ -0.57
VAMP1-207ENST00000539047 H7BYZ3 331 aa11.47□□□□□ -0.57
VAMP1-207ENST00000539047 K7EN84 100 aa11.47□□□□□ -0.57
VAMP1-207ENST00000539047 IGLV2-8P01709 118 aa11.47□□□□□ -0.57
VAMP1-207ENST00000539047 P01737 135 aa11.47□□□□□ -0.57
VAMP1-207ENST00000539047 FAM162BQ5T6X4 162 aa11.47□□□□□ -0.57
VAMP1-207ENST00000539047 OR10G8Q8NGN5 311 aa11.47□□□□□ -0.57
VAMP1-207ENST00000539047 C8orf49Q96NF6 230 aa11.47□□□□□ -0.57
VAMP1-207ENST00000539047 ASCL2Q99929 193 aa11.47□□□□□ -0.57
VAMP1-207ENST00000539047 MLST8Q9BVC4 326 aa11.47□□□□□ -0.57
VAMP1-207ENST00000539047 KNCNA6PVL3 124 aa11.46□□□□□ -0.57
VAMP1-207ENST00000539047 WIPF1O43516 503 aa11.46□□□□□ -0.57
VAMP1-207ENST00000539047 GPX1P07203 203 aa11.46□□□□□ -0.57
VAMP1-207ENST00000539047 DEFB1P60022 68 aa11.46□□□□□ -0.57
VAMP1-207ENST00000539047 OR5I1Q13606 314 aa11.46□□□□□ -0.57
VAMP1-207ENST00000539047 RNF212Q495C1 297 aa11.46□□□□□ -0.57
VAMP1-207ENST00000539047 FAM231DQ6ZW35 169 aa11.46□□□□□ -0.57
VAMP1-207ENST00000539047 APRG1Q8IVJ8 170 aa11.46□□□□□ -0.57
VAMP1-207ENST00000539047 ZC2HC1AQ96GY0 325 aa11.46□□□□□ -0.57
VAMP1-207ENST00000539047 OSTCQ9NRP0 149 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms