RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 Q0VFX4 171 aa5.23□□□□□ -1.57
USP28-207ENST00000538475 LAGE3Q14657 143 aa5.23□□□□□ -1.57
USP28-207ENST00000538475 ZNF474Q6S9Z5 364 aaPredicted RBP5.23□□□□□ -1.57
USP28-207ENST00000538475 SIGLEC15Q6ZMC9 328 aa5.23□□□□□ -1.57
USP28-207ENST00000538475 CITED2Q99967 270 aaPredicted RBP5.23□□□□□ -1.57
USP28-207ENST00000538475 RAB1BQ9H0U4 201 aa5.23□□□□□ -1.57
USP28-207ENST00000538475 AKIRIN1Q9H9L7 192 aaPredicted RBP5.23□□□□□ -1.57
USP28-207ENST00000538475 RNF7Q9UBF6 113 aa5.23□□□□□ -1.57
USP28-207ENST00000538475 UFC1Q9Y3C8 167 aa5.23□□□□□ -1.57
USP28-207ENST00000538475 MALRD1Q5VYJ5 2156 aa5.23□□□□□ -1.57
USP28-207ENST00000538475 COL27A1Q8IZC6 1860 aaPredicted RBP5.22□□□□□ -1.57
USP28-207ENST00000538475 IGLV2-18A0A075B6J9 118 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 IGHV4-4A0A075B6R2 117 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 FAM240AA0A1B0GVK7 77 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 A0A1W2PPI3 338 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 PRSS29PA6NIE9 313 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 CGB1A6NKQ9 187 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 PLXNB1O43157 2135 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 KLK10O43240 276 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 SH2D1AO60880 128 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 PPP1R17O96001 155 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 IGLV2-23P01705 113 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 CLEC3BP05452 202 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 P0DMU3 169 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 FAM231AP0DMU4 169 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 FAM231CP0DMU5 169 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 MYOD1P15172 320 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 RPL13AP40429 203 aaKnown RBP5.22□□□□□ -1.57
USP28-207ENST00000538475 RPL27AP46776 148 aaKnown RBP5.22□□□□□ -1.57
USP28-207ENST00000538475 CRIP1P50238 77 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 INSL3P51460 131 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 HOXA4Q00056 320 aaPredicted RBP5.22□□□□□ -1.57
USP28-207ENST00000538475 ZNF672Q499Z4 452 aaPredicted RBP5.22□□□□□ -1.57
USP28-207ENST00000538475 ORMDL2Q53FV1 153 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 KRTAP5-3Q6L8H2 238 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 IL17RELQ6ZVW7 336 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 GTSCR1Q86UQ5 136 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 NFE4Q86UQ8 179 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 CXorf67Q86X51 503 aaPredicted RBP5.22□□□□□ -1.57
USP28-207ENST00000538475 SAP25Q8TEE9 199 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 GLMPQ8WWB7 406 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 RNF185Q96GF1 192 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 CARD19Q96LW7 228 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 IMUPQ9GZP8 106 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 FBXL15Q9H469 300 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 SS18L2Q9UHA2 77 aa5.22□□□□□ -1.57
USP28-207ENST00000538475 TMEM213A2RRL7 107 aa5.21□□□□□ -1.58
USP28-207ENST00000538475 RBAKDNA6NC62 111 aa5.21□□□□□ -1.58
USP28-207ENST00000538475 B5MCH6 92 aa5.21□□□□□ -1.58
USP28-207ENST00000538475 C16orf97H3BN30 126 aa5.21□□□□□ -1.58
USP28-207ENST00000538475 MRPS12O15235 138 aaKnown RBP5.21□□□□□ -1.58
USP28-207ENST00000538475 SCGB2A1O75556 95 aa5.21□□□□□ -1.58
USP28-207ENST00000538475 NHLRC4P0CG21 123 aaPredicted RBP5.21□□□□□ -1.58
USP28-207ENST00000538475 HLA-DMBP28068 263 aa5.21□□□□□ -1.58
USP28-207ENST00000538475 GLRXP35754 106 aa5.21□□□□□ -1.58
USP28-207ENST00000538475 MAGEA5P43359 124 aa5.21□□□□□ -1.58
USP28-207ENST00000538475 TEX36Q5VZQ5 186 aa5.21□□□□□ -1.58
USP28-207ENST00000538475 PPP1R27Q86WC6 154 aa5.21□□□□□ -1.58
USP28-207ENST00000538475 Q8N1X5 172 aa5.21□□□□□ -1.58
USP28-207ENST00000538475 DEFB119Q8N690 84 aa5.21□□□□□ -1.58
USP28-207ENST00000538475 SGK494Q96LW2 274 aa5.21□□□□□ -1.58
USP28-207ENST00000538475 ASCL2Q99929 193 aa5.21□□□□□ -1.58
USP28-207ENST00000538475 RASL11BQ9BPW5 248 aa5.21□□□□□ -1.58
USP28-207ENST00000538475 SPXQ9BT56 116 aa5.21□□□□□ -1.58
USP28-207ENST00000538475 FSCN3Q9NQT6 498 aa5.21□□□□□ -1.58
USP28-207ENST00000538475 TMEM160Q9NX00 188 aa5.21□□□□□ -1.58
USP28-207ENST00000538475 MRPL35Q9NZE8 188 aaKnown RBP5.21□□□□□ -1.58
USP28-207ENST00000538475 MDFICQ9P1T7 246 aa5.21□□□□□ -1.58
USP28-207ENST00000538475 TRANK1O15050 2925 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 IGLV3-9A0A075B6K5 115 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 TRAV8-1A0A0A6YYK1 113 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 TRGV5A0A0B4J1U4 118 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 TRAV40A0A0B4J280 105 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 K7ESF4 209 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 PLAUP00749 431 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 RBP4P02753 201 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 ATP5G1P05496 136 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 CRYGBP07316 175 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 LGALS1P09382 135 aaKnown RBP5.2□□□□□ -1.58
USP28-207ENST00000538475 CD7P09564 240 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 PSMB2P49721 201 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 HERVK_113P61574 105 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 HERV-K104P63124 156 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 HES1Q14469 280 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 TMEM78Q5T7P6 136 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 ASPHD1Q5U4P2 390 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 AMTNQ6UX39 209 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 MAPKAPK5-AS1Q8N8E1 139 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 ZNRF1Q8ND25 227 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 MDS2Q8NDY4 140 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 IGFBPL1Q8WX77 278 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 GAFA1Q96PS6 74 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 PRR25Q96S07 402 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 MRPL20Q9BYC9 149 aaKnown RBP5.2□□□□□ -1.58
USP28-207ENST00000538475 HIF1ANQ9NWT6 349 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 MRPL36Q9P0J6 103 aaKnown RBP5.2□□□□□ -1.58
USP28-207ENST00000538475 MED13Q9UHV7 2174 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 HTTP42858 3142 aa5.2□□□□□ -1.58
USP28-207ENST00000538475 IGHV1-69DA0A0B4J2H0 117 aa5.19□□□□□ -1.58
USP28-207ENST00000538475 I3L2K1 104 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 690.3 ms