RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 SOCS3O14543 225 aa7.99□□□□□ -1.13
TNFRSF1A-211ENST00000538363 ATP6V1G1O75348 118 aa7.99□□□□□ -1.13
TNFRSF1A-211ENST00000538363 IGKV3-20P01619 116 aa7.99□□□□□ -1.13
TNFRSF1A-211ENST00000538363 ZNF705DP0CH99 300 aaPredicted RBP7.99□□□□□ -1.13
TNFRSF1A-211ENST00000538363 ZNF705BP0CI00 300 aaPredicted RBP7.99□□□□□ -1.13
TNFRSF1A-211ENST00000538363 CT45A10P0DMU9 189 aa7.99□□□□□ -1.13
TNFRSF1A-211ENST00000538363 ERCC8Q13216 396 aa7.99□□□□□ -1.13
TNFRSF1A-211ENST00000538363 ADIRFQ15847 76 aa7.99□□□□□ -1.13
TNFRSF1A-211ENST00000538363 TMEM183BQ1AE95 376 aa7.99□□□□□ -1.13
TNFRSF1A-211ENST00000538363 ACTL10Q5JWF8 245 aa7.99□□□□□ -1.13
TNFRSF1A-211ENST00000538363 SAPCD1Q5SSQ6 148 aa7.99□□□□□ -1.13
TNFRSF1A-211ENST00000538363 STHQ8IWL8 128 aa7.99□□□□□ -1.13
TNFRSF1A-211ENST00000538363 WFDC9Q8NEX5 89 aa7.99□□□□□ -1.13
TNFRSF1A-211ENST00000538363 OR8A1Q8NGG7 326 aa7.99□□□□□ -1.13
TNFRSF1A-211ENST00000538363 C11orf52Q96A22 123 aa7.99□□□□□ -1.13
TNFRSF1A-211ENST00000538363 LINC00477Q96M19 166 aa7.99□□□□□ -1.13
TNFRSF1A-211ENST00000538363 LINC00479Q96M42 142 aa7.99□□□□□ -1.13
TNFRSF1A-211ENST00000538363 SEC11CQ9BY50 192 aa7.99□□□□□ -1.13
TNFRSF1A-211ENST00000538363 NAT8Q9UHE5 227 aa7.99□□□□□ -1.13
TNFRSF1A-211ENST00000538363 FBN3Q75N90 2809 aa7.99□□□□□ -1.13
TNFRSF1A-211ENST00000538363 RBAKDNA6NC62 111 aa7.98□□□□□ -1.13
TNFRSF1A-211ENST00000538363 KNCNA6PVL3 124 aa7.98□□□□□ -1.13
TNFRSF1A-211ENST00000538363 ZNF138P52744 262 aa7.98□□□□□ -1.13
TNFRSF1A-211ENST00000538363 CENPWQ5EE01 88 aa7.98□□□□□ -1.13
TNFRSF1A-211ENST00000538363 FOXI2Q6ZQN5 318 aa7.98□□□□□ -1.13
TNFRSF1A-211ENST00000538363 FAM24BQ8N5W8 94 aa7.98□□□□□ -1.13
TNFRSF1A-211ENST00000538363 TMEM75Q8N9X5 138 aa7.98□□□□□ -1.13
TNFRSF1A-211ENST00000538363 TVP23CQ96ET8 276 aa7.98□□□□□ -1.13
TNFRSF1A-211ENST00000538363 VGLL1Q99990 258 aa7.98□□□□□ -1.13
TNFRSF1A-211ENST00000538363 DERL1Q9BUN8 251 aa7.98□□□□□ -1.13
TNFRSF1A-211ENST00000538363 MAP6D1Q9H9H5 199 aa7.98□□□□□ -1.13
TNFRSF1A-211ENST00000538363 ZFP30Q9Y2G7 519 aa7.98□□□□□ -1.13
TNFRSF1A-211ENST00000538363 TRAV8-1A0A0A6YYK1 113 aa7.97□□□□□ -1.13
TNFRSF1A-211ENST00000538363 PRAC2D3DTV9 90 aa7.97□□□□□ -1.13
TNFRSF1A-211ENST00000538363 F6UB75 175 aa7.97□□□□□ -1.13
TNFRSF1A-211ENST00000538363 J3KRW8 73 aa7.97□□□□□ -1.13
TNFRSF1A-211ENST00000538363 TSPOP30536 169 aa7.97□□□□□ -1.13
TNFRSF1A-211ENST00000538363 LEPP41159 167 aa7.97□□□□□ -1.13
TNFRSF1A-211ENST00000538363 PRR27Q6MZM9 219 aa7.97□□□□□ -1.13
TNFRSF1A-211ENST00000538363 APRG1Q8IVJ8 170 aa7.97□□□□□ -1.13
TNFRSF1A-211ENST00000538363 SVBPQ8N300 66 aa7.97□□□□□ -1.13
TNFRSF1A-211ENST00000538363 NHLRC2Q8NBF2 726 aa7.97□□□□□ -1.13
TNFRSF1A-211ENST00000538363 TUBA4BQ9H853 241 aa7.97□□□□□ -1.13
TNFRSF1A-211ENST00000538363 AURKAIP1Q9NWT8 199 aaPredicted RBP7.97□□□□□ -1.13
TNFRSF1A-211ENST00000538363 SNAPINO95295 136 aa7.96□□□□□ -1.14
TNFRSF1A-211ENST00000538363 GPX1P07203 203 aa7.96□□□□□ -1.14
TNFRSF1A-211ENST00000538363 DEFB1P60022 68 aa7.96□□□□□ -1.14
TNFRSF1A-211ENST00000538363 PNRC1Q12796 327 aaPredicted RBP7.96□□□□□ -1.14
TNFRSF1A-211ENST00000538363 SMUG1Q53HV7 270 aa7.96□□□□□ -1.14
TNFRSF1A-211ENST00000538363 Q86TA4 180 aa7.96□□□□□ -1.14
TNFRSF1A-211ENST00000538363 C15orf54Q8N8G6 183 aa7.96□□□□□ -1.14
TNFRSF1A-211ENST00000538363 Q8TAT8 98 aa7.96□□□□□ -1.14
TNFRSF1A-211ENST00000538363 C2CD4CQ8TF44 421 aa7.96□□□□□ -1.14
TNFRSF1A-211ENST00000538363 AGPAT4-IT1Q9H0P7 198 aa7.96□□□□□ -1.14
TNFRSF1A-211ENST00000538363 SAV1Q9H4B6 383 aaPredicted RBP7.96□□□□□ -1.14
TNFRSF1A-211ENST00000538363 ZNF256Q9Y2P7 627 aaPredicted RBP7.96□□□□□ -1.14
TNFRSF1A-211ENST00000538363 A0A0J9YX75 114 aa7.95□□□□□ -1.14
TNFRSF1A-211ENST00000538363 C9JCJ5 164 aa7.95□□□□□ -1.14
TNFRSF1A-211ENST00000538363 CD7P09564 240 aa7.95□□□□□ -1.14
TNFRSF1A-211ENST00000538363 ERVFC1-1P60608 527 aa7.95□□□□□ -1.14
TNFRSF1A-211ENST00000538363 NUTF2P61970 127 aaKnown RBP7.95□□□□□ -1.14
TNFRSF1A-211ENST00000538363 C9orf47Q6ZRZ4 202 aa7.95□□□□□ -1.14
TNFRSF1A-211ENST00000538363 OCC1Q8TAD7 63 aa7.95□□□□□ -1.14
TNFRSF1A-211ENST00000538363 ASCL2Q99929 193 aa7.95□□□□□ -1.14
TNFRSF1A-211ENST00000538363 ZNF492Q9P255 531 aa7.95□□□□□ -1.14
TNFRSF1A-211ENST00000538363 KLF12Q9Y4X4 402 aa7.95□□□□□ -1.14
TNFRSF1A-211ENST00000538363 TRBV6-1A0A0K0K1D8 114 aa7.94□□□□□ -1.14
TNFRSF1A-211ENST00000538363 PGPEP1LA6NFU8 196 aa7.94□□□□□ -1.14
TNFRSF1A-211ENST00000538363 NPIPB6E9PJ23 425 aa7.94□□□□□ -1.14
TNFRSF1A-211ENST00000538363 MT-ND4LP03901 98 aa7.94□□□□□ -1.14
TNFRSF1A-211ENST00000538363 RNASE4P34096 147 aaKnown RBP7.94□□□□□ -1.14
TNFRSF1A-211ENST00000538363 BEAN1Q3B7T3 259 aa7.94□□□□□ -1.14
TNFRSF1A-211ENST00000538363 TMEM183AQ8IXX5 376 aa7.94□□□□□ -1.14
TNFRSF1A-211ENST00000538363 SDF2L1Q9HCN8 221 aa7.94□□□□□ -1.14
TNFRSF1A-211ENST00000538363 RPS10P5Q9NQ39 176 aa7.94□□□□□ -1.14
TNFRSF1A-211ENST00000538363 LY96Q9Y6Y9 160 aa7.94□□□□□ -1.14
TNFRSF1A-211ENST00000538363 B4DEV8 164 aa7.93□□□□□ -1.14
TNFRSF1A-211ENST00000538363 GCGP01275 180 aa7.93□□□□□ -1.14
TNFRSF1A-211ENST00000538363 LTAP01374 205 aa7.93□□□□□ -1.14
TNFRSF1A-211ENST00000538363 HLA-DRB4P13762 266 aa7.93□□□□□ -1.14
TNFRSF1A-211ENST00000538363 RPL35AP18077 110 aaKnown RBP7.93□□□□□ -1.14
TNFRSF1A-211ENST00000538363 FXYD7P58549 80 aa7.93□□□□□ -1.14
TNFRSF1A-211ENST00000538363 RPL23P62829 140 aaKnown RBP7.93□□□□□ -1.14
TNFRSF1A-211ENST00000538363 OR5I1Q13606 314 aa7.93□□□□□ -1.14
TNFRSF1A-211ENST00000538363 ZNF124Q15973 351 aa7.93□□□□□ -1.14
TNFRSF1A-211ENST00000538363 CLRN3Q8NCR9 226 aa7.93□□□□□ -1.14
TNFRSF1A-211ENST00000538363 SMIM12Q96EX1 92 aa7.93□□□□□ -1.14
TNFRSF1A-211ENST00000538363 C8orf49Q96NF6 230 aa7.93□□□□□ -1.14
TNFRSF1A-211ENST00000538363 PRR25Q96S07 402 aa7.93□□□□□ -1.14
TNFRSF1A-211ENST00000538363 CARHSP1Q9Y2V2 147 aaKnown RBP7.93□□□□□ -1.14
TNFRSF1A-211ENST00000538363 LENEPQ9Y5L5 61 aa7.93□□□□□ -1.14
TNFRSF1A-211ENST00000538363 HLA-DRB4X5D2U9 266 aa7.93□□□□□ -1.14
TNFRSF1A-211ENST00000538363 FABP5P3A8MUU1 101 aa7.92□□□□□ -1.14
TNFRSF1A-211ENST00000538363 ZNF705GA8MUZ8 300 aaPredicted RBP7.92□□□□□ -1.14
TNFRSF1A-211ENST00000538363 H3BMM0 161 aa7.92□□□□□ -1.14
TNFRSF1A-211ENST00000538363 PPP1R2P9O14990 202 aa7.92□□□□□ -1.14
TNFRSF1A-211ENST00000538363 GATCO43716 136 aaKnown RBP7.92□□□□□ -1.14
TNFRSF1A-211ENST00000538363 P01737 135 aa7.92□□□□□ -1.14
TNFRSF1A-211ENST00000538363 ODF3L2Q3SX64 289 aa7.92□□□□□ -1.14
TNFRSF1A-211ENST00000538363 GDF5OSQ5U4N7 250 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms