RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 PLA2G2EQ9NZK7 142 aa10.58□□□□□ -0.72
LRRK1-211ENST00000538064 HERC2O95714 4834 aa10.58□□□□□ -0.72
LRRK1-211ENST00000538064 hCG_2014768A0A024R1R8 64 aa10.57□□□□□ -0.72
LRRK1-211ENST00000538064 KANTRA0A1W2PQU2 76 aa10.57□□□□□ -0.72
LRRK1-211ENST00000538064 OR10J4P0C629 311 aa10.57□□□□□ -0.72
LRRK1-211ENST00000538064 HTN3P15516 51 aa10.57□□□□□ -0.72
LRRK1-211ENST00000538064 CDC34P49427 236 aaPredicted RBP10.57□□□□□ -0.72
LRRK1-211ENST00000538064 UBE2L3P68036 154 aaKnown RBP10.57□□□□□ -0.72
LRRK1-211ENST00000538064 PQLC2Q6ZP29 291 aa10.57□□□□□ -0.72
LRRK1-211ENST00000538064 FXYD5Q96DB9 178 aa10.57□□□□□ -0.72
LRRK1-211ENST00000538064 MRPL53Q96EL3 112 aaKnown RBP10.57□□□□□ -0.72
LRRK1-211ENST00000538064 SH3BGRL3Q9H299 93 aa10.57□□□□□ -0.72
LRRK1-211ENST00000538064 CYTL1Q9NRR1 136 aa10.57□□□□□ -0.72
LRRK1-211ENST00000538064 PPP1R14DQ9NXH3 145 aa10.57□□□□□ -0.72
LRRK1-211ENST00000538064 PLAC8L1A1L4L8 177 aa10.56□□□□□ -0.72
LRRK1-211ENST00000538064 PFDN1O60925 122 aa10.56□□□□□ -0.72
LRRK1-211ENST00000538064 CDKN1BP46527 198 aa10.56□□□□□ -0.72
LRRK1-211ENST00000538064 EIF5AP63241 154 aaKnown RBP10.56□□□□□ -0.72
LRRK1-211ENST00000538064 AKAP14Q86UN6 197 aa10.56□□□□□ -0.72
LRRK1-211ENST00000538064 OR10J6PQ8NGY7 276 aa10.56□□□□□ -0.72
LRRK1-211ENST00000538064 ACTR3CQ9C0K3 210 aaPredicted RBP10.56□□□□□ -0.72
LRRK1-211ENST00000538064 BCL2L11O43521 198 aa10.55□□□□□ -0.72
LRRK1-211ENST00000538064 NDUFB4O95168 129 aa10.55□□□□□ -0.72
LRRK1-211ENST00000538064 PRM2P04554 102 aa10.55□□□□□ -0.72
LRRK1-211ENST00000538064 TAS2R60P59551 318 aa10.55□□□□□ -0.72
LRRK1-211ENST00000538064 AKR1C8PQ5T2L2 129 aa10.55□□□□□ -0.72
LRRK1-211ENST00000538064 TMEM88Q6PEY1 159 aa10.55□□□□□ -0.72
LRRK1-211ENST00000538064 LYPD1Q8N2G4 141 aa10.55□□□□□ -0.72
LRRK1-211ENST00000538064 C1QBP02746 253 aa10.54□□□□□ -0.72
LRRK1-211ENST00000538064 PRB4P10163 310 aaPredicted RBP10.54□□□□□ -0.72
LRRK1-211ENST00000538064 ICAM4Q14773 271 aa10.54□□□□□ -0.72
LRRK1-211ENST00000538064 LINC00336Q6ZUF6 198 aa10.54□□□□□ -0.72
LRRK1-211ENST00000538064 UBE2DNLQ8IWF7 75 aa10.54□□□□□ -0.72
LRRK1-211ENST00000538064 EXOC3-AS1Q8N2X6 119 aa10.54□□□□□ -0.72
LRRK1-211ENST00000538064 ZNF503Q96F45 646 aa10.54□□□□□ -0.72
LRRK1-211ENST00000538064 C16orf74Q96GX8 76 aa10.54□□□□□ -0.72
LRRK1-211ENST00000538064 HYLS1Q96M11 299 aa10.54□□□□□ -0.72
LRRK1-211ENST00000538064 LINC01587Q99440 93 aa10.54□□□□□ -0.72
LRRK1-211ENST00000538064 C20orf144Q9BQM9 153 aa10.54□□□□□ -0.72
LRRK1-211ENST00000538064 ZNF471Q9BX82 626 aaPredicted RBP10.54□□□□□ -0.72
LRRK1-211ENST00000538064 PKHD1P08F94 4074 aa10.53□□□□□ -0.72
LRRK1-211ENST00000538064 HMGB3O15347 200 aaKnown RBP10.53□□□□□ -0.72
LRRK1-211ENST00000538064 STAG3L2P0CL84 134 aa10.53□□□□□ -0.72
LRRK1-211ENST00000538064 STAG3L3P0CL85 134 aa10.53□□□□□ -0.72
LRRK1-211ENST00000538064 AZU1P20160 251 aa10.53□□□□□ -0.72
LRRK1-211ENST00000538064 CSN1S1P47710 185 aa10.53□□□□□ -0.72
LRRK1-211ENST00000538064 RANP62826 216 aaKnown RBP10.53□□□□□ -0.72
LRRK1-211ENST00000538064 FAM74A1Q5RGS3 127 aa10.53□□□□□ -0.72
LRRK1-211ENST00000538064 TMUB2Q71RG4 321 aa10.53□□□□□ -0.72
LRRK1-211ENST00000538064 C15orf53Q8NAA6 179 aa10.53□□□□□ -0.72
LRRK1-211ENST00000538064 RAB24Q969Q5 203 aa10.53□□□□□ -0.72
LRRK1-211ENST00000538064 PRAC2D3DTV9 90 aa10.52□□□□□ -0.73
LRRK1-211ENST00000538064 H7BYZ3 331 aa10.52□□□□□ -0.73
LRRK1-211ENST00000538064 M0R3E3 92 aa10.52□□□□□ -0.73
LRRK1-211ENST00000538064 EIF3GO75821 320 aaKnown RBP eCLIP10.52□□□□□ -0.73
LRRK1-211ENST00000538064 CXorf1O96002 111 aa10.52□□□□□ -0.73
LRRK1-211ENST00000538064 DEFB130BP0DP73 79 aa10.52□□□□□ -0.73
LRRK1-211ENST00000538064 DEFB130AP0DP74 79 aa10.52□□□□□ -0.73
LRRK1-211ENST00000538064 LGALS9BQ3B8N2 356 aa10.52□□□□□ -0.73
LRRK1-211ENST00000538064 RNF212Q495C1 297 aa10.52□□□□□ -0.73
LRRK1-211ENST00000538064 RNASE8Q8TDE3 154 aaKnown RBP10.52□□□□□ -0.73
LRRK1-211ENST00000538064 TMEM263Q8WUH6 116 aaKnown RBP10.52□□□□□ -0.73
LRRK1-211ENST00000538064 PHYHIPLQ96FC7 376 aa10.52□□□□□ -0.73
LRRK1-211ENST00000538064 ODF3Q96PU9 254 aa10.52□□□□□ -0.73
LRRK1-211ENST00000538064 Q9H3A6 140 aa10.52□□□□□ -0.73
LRRK1-211ENST00000538064 DNAH11Q96DT5 4516 aa10.51□□□□□ -0.73
LRRK1-211ENST00000538064 DYNC1H1Q14204 4646 aaKnown RBP10.51□□□□□ -0.73
LRRK1-211ENST00000538064 CTXND1A0A1B0GTU2 59 aa10.51□□□□□ -0.73
LRRK1-211ENST00000538064 SEC11BP0C7V7 166 aa10.51□□□□□ -0.73
LRRK1-211ENST00000538064 ARL14EPLP0DKL9 152 aa10.51□□□□□ -0.73
LRRK1-211ENST00000538064 TPT1P13693 172 aaKnown RBP10.51□□□□□ -0.73
LRRK1-211ENST00000538064 GFI1BQ5VTD9 330 aa10.51□□□□□ -0.73
LRRK1-211ENST00000538064 ZNF493Q6ZR52 646 aa10.51□□□□□ -0.73
LRRK1-211ENST00000538064 CMTM2Q8TAZ6 248 aa10.51□□□□□ -0.73
LRRK1-211ENST00000538064 RXFP4Q8TDU9 374 aa10.51□□□□□ -0.73
LRRK1-211ENST00000538064 LINC00477Q96M19 166 aa10.51□□□□□ -0.73
LRRK1-211ENST00000538064 TMEM167BQ9NRX6 74 aa10.51□□□□□ -0.73
LRRK1-211ENST00000538064 KIAA1109Q2LD37 5005 aa10.51□□□□□ -0.73
LRRK1-211ENST00000538064 UMAD1C9J7I0 102 aa10.5□□□□□ -0.73
LRRK1-211ENST00000538064 NPIPB6E9PJ23 425 aa10.5□□□□□ -0.73
LRRK1-211ENST00000538064 KIR3DS1Q14943 382 aa10.5□□□□□ -0.73
LRRK1-211ENST00000538064 OTORQ9NRC9 128 aa10.5□□□□□ -0.73
LRRK1-211ENST00000538064 TIMM8BQ9Y5J9 83 aaPredicted RBP10.5□□□□□ -0.73
LRRK1-211ENST00000538064 PKD1P98161 4303 aa10.49□□□□□ -0.73
LRRK1-211ENST00000538064 A0A1B0GVY2 172 aa10.49□□□□□ -0.73
LRRK1-211ENST00000538064 M0R2N4 97 aa10.49□□□□□ -0.73
LRRK1-211ENST00000538064 RTL8CO15255 209 aa10.49□□□□□ -0.73
LRRK1-211ENST00000538064 ATP5G1P05496 136 aa10.49□□□□□ -0.73
LRRK1-211ENST00000538064 HTN1P15515 57 aa10.49□□□□□ -0.73
LRRK1-211ENST00000538064 GCHFRP30047 84 aa10.49□□□□□ -0.73
LRRK1-211ENST00000538064 LEPP41159 167 aa10.49□□□□□ -0.73
LRRK1-211ENST00000538064 ATP5G3P48201 142 aa10.49□□□□□ -0.73
LRRK1-211ENST00000538064 FAM3BP58499 235 aaPredicted RBP10.49□□□□□ -0.73
LRRK1-211ENST00000538064 LGALSLQ3ZCW2 172 aaPredicted RBP10.49□□□□□ -0.73
LRRK1-211ENST00000538064 ZFP69Q49AA0 526 aa10.49□□□□□ -0.73
LRRK1-211ENST00000538064 EIF5AL1Q6IS14 154 aaKnown RBP10.49□□□□□ -0.73
LRRK1-211ENST00000538064 Q6ZR54 194 aa10.49□□□□□ -0.73
LRRK1-211ENST00000538064 IQCF2Q8IXL9 164 aa10.49□□□□□ -0.73
LRRK1-211ENST00000538064 IGLV2-18A0A075B6J9 118 aa10.48□□□□□ -0.73
LRRK1-211ENST00000538064 PGPA6NDG6 321 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms