RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 VPS13DQ5THJ4 4388 aa12.9□□□□□ -0.34
TNFRSF1A-209ENST00000536717 A0A0J9YX75 114 aa12.89□□□□□ -0.35
TNFRSF1A-209ENST00000536717 FXYD7P58549 80 aa12.89□□□□□ -0.35
TNFRSF1A-209ENST00000536717 OR4B1Q8NGF8 309 aa12.89□□□□□ -0.35
TNFRSF1A-209ENST00000536717 TMPRSS5Q9H3S3 457 aa12.89□□□□□ -0.35
TNFRSF1A-209ENST00000536717 SLC35B3Q9H1N7 401 aa12.88□□□□□ -0.35
TNFRSF1A-209ENST00000536717 OTORQ9NRC9 128 aa12.88□□□□□ -0.35
TNFRSF1A-209ENST00000536717 A0A1B0GV50 99 aa12.88□□□□□ -0.35
TNFRSF1A-209ENST00000536717 ZNF705FA8MVS1 300 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF1A-209ENST00000536717 M0R3E3 92 aa12.88□□□□□ -0.35
TNFRSF1A-209ENST00000536717 HBE1P02100 147 aa12.88□□□□□ -0.35
TNFRSF1A-209ENST00000536717 CSN1S1P47710 185 aa12.88□□□□□ -0.35
TNFRSF1A-209ENST00000536717 TEX261Q6UWH6 196 aa12.88□□□□□ -0.35
TNFRSF1A-209ENST00000536717 ZNF705AQ6ZN79 300 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF1A-209ENST00000536717 TRAV1-1A0A0B4J248 108 aa12.87□□□□□ -0.35
TNFRSF1A-209ENST00000536717 PGPA6NDG6 321 aa12.87□□□□□ -0.35
TNFRSF1A-209ENST00000536717 A8MTW9 85 aa12.87□□□□□ -0.35
TNFRSF1A-209ENST00000536717 DUSP14O95147 198 aaKnown RBP12.87□□□□□ -0.35
TNFRSF1A-209ENST00000536717 BLOC1S1P78537 153 aa12.87□□□□□ -0.35
TNFRSF1A-209ENST00000536717 OR8A1Q8NGG7 326 aa12.87□□□□□ -0.35
TNFRSF1A-209ENST00000536717 CMTM2Q8TAZ6 248 aa12.87□□□□□ -0.35
TNFRSF1A-209ENST00000536717 RXFP4Q8TDU9 374 aa12.87□□□□□ -0.35
TNFRSF1A-209ENST00000536717 A0A1W2PRE2 83 aa12.86□□□□□ -0.35
TNFRSF1A-209ENST00000536717 IFNA7P01567 189 aa12.86□□□□□ -0.35
TNFRSF1A-209ENST00000536717 ZNF705DP0CH99 300 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-209ENST00000536717 ZNF705BP0CI00 300 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-209ENST00000536717 HIST1H1AQ02539 215 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-209ENST00000536717 OR10J6PQ8NGY7 276 aa12.86□□□□□ -0.35
TNFRSF1A-209ENST00000536717 CELA1Q9UNI1 258 aa12.86□□□□□ -0.35
TNFRSF1A-209ENST00000536717 LY6G6CO95867 125 aa12.85□□□□□ -0.35
TNFRSF1A-209ENST00000536717 PPT1P50897 306 aa12.85□□□□□ -0.35
TNFRSF1A-209ENST00000536717 UBE2G2P60604 165 aa12.85□□□□□ -0.35
TNFRSF1A-209ENST00000536717 AMTNQ6UX39 209 aa12.85□□□□□ -0.35
TNFRSF1A-209ENST00000536717 ZNF680Q8NEM1 530 aa12.85□□□□□ -0.35
TNFRSF1A-209ENST00000536717 NEU1Q99519 415 aa12.85□□□□□ -0.35
TNFRSF1A-209ENST00000536717 NKX6-2Q9C056 277 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF1A-209ENST00000536717 PRAC2D3DTV9 90 aa12.84□□□□□ -0.35
TNFRSF1A-209ENST00000536717 PRB4P10163 310 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF1A-209ENST00000536717 CNN1P51911 297 aaKnown RBP12.84□□□□□ -0.35
TNFRSF1A-209ENST00000536717 ZNF767PQ75MW2 155 aa12.84□□□□□ -0.35
TNFRSF1A-209ENST00000536717 ARL2-SNX15V9GYD0 113 aa12.84□□□□□ -0.35
TNFRSF1A-209ENST00000536717 FAM74A7A6NL05 159 aa12.83□□□□□ -0.35
TNFRSF1A-209ENST00000536717 SLC25A5P05141 298 aaKnown RBP12.83□□□□□ -0.35
TNFRSF1A-209ENST00000536717 SUMO1P63165 101 aaKnown RBP12.83□□□□□ -0.35
TNFRSF1A-209ENST00000536717 Q6ZTC4 211 aa12.83□□□□□ -0.35
TNFRSF1A-209ENST00000536717 ARL6IP6Q8N6S5 226 aa12.83□□□□□ -0.35
TNFRSF1A-209ENST00000536717 C5orf17Q8NAS9 161 aa12.83□□□□□ -0.35
TNFRSF1A-209ENST00000536717 YTHDF2Q9Y5A9 579 aaKnown RBP12.83□□□□□ -0.35
TNFRSF1A-209ENST00000536717 DNAH6Q9C0G6 4158 aa12.83□□□□□ -0.36
TNFRSF1A-209ENST00000536717 IGHV3OR16-12A0A075B7B8 117 aa12.83□□□□□ -0.36
TNFRSF1A-209ENST00000536717 GGTLC3B5MD39 225 aa12.83□□□□□ -0.36
TNFRSF1A-209ENST00000536717 C11orf94C9JXX5 98 aa12.83□□□□□ -0.36
TNFRSF1A-209ENST00000536717 CST9LP1Q5W188 147 aa12.83□□□□□ -0.36
TNFRSF1A-209ENST00000536717 C1orf158Q8N1D5 194 aa12.83□□□□□ -0.36
TNFRSF1A-209ENST00000536717 C2CD4CQ8TF44 421 aa12.83□□□□□ -0.36
TNFRSF1A-209ENST00000536717 PPP1R14DQ9NXH3 145 aa12.83□□□□□ -0.36
TNFRSF1A-209ENST00000536717 DIRC3C9JPN6 131 aa12.82□□□□□ -0.36
TNFRSF1A-209ENST00000536717 PAGE4O60829 102 aa12.82□□□□□ -0.36
TNFRSF1A-209ENST00000536717 CCL20P78556 96 aa12.82□□□□□ -0.36
TNFRSF1A-209ENST00000536717 NDUFA5Q16718 116 aa12.82□□□□□ -0.36
TNFRSF1A-209ENST00000536717 MANBALQ9NQG1 85 aa12.82□□□□□ -0.36
TNFRSF1A-209ENST00000536717 GNG13Q9P2W3 67 aa12.82□□□□□ -0.36
TNFRSF1A-209ENST00000536717 RPH3ALQ9UNE2 315 aa12.82□□□□□ -0.36
TNFRSF1A-209ENST00000536717 SMIM9A6NGZ8 99 aa12.81□□□□□ -0.36
TNFRSF1A-209ENST00000536717 C12orf74Q32Q52 190 aa12.81□□□□□ -0.36
TNFRSF1A-209ENST00000536717 FRAS1Q86XX4 4008 aa12.81□□□□□ -0.36
TNFRSF1A-209ENST00000536717 IGKV2-40A0A087WW87 121 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF1A-209ENST00000536717 RBAKDNA6NC62 111 aa12.8□□□□□ -0.36
TNFRSF1A-209ENST00000536717 NPIPB6E9PJ23 425 aa12.8□□□□□ -0.36
TNFRSF1A-209ENST00000536717 IFNA1P01562 189 aa12.8□□□□□ -0.36
TNFRSF1A-209ENST00000536717 IGKV2D-40P01614 121 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF1A-209ENST00000536717 SERTM2A0A1B0GWG4 89 aa12.79□□□□□ -0.36
TNFRSF1A-209ENST00000536717 K7EQM0 130 aa12.79□□□□□ -0.36
TNFRSF1A-209ENST00000536717 M0R2Z0 102 aa12.79□□□□□ -0.36
TNFRSF1A-209ENST00000536717 CRXO43186 299 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF1A-209ENST00000536717 GNG5P63218 68 aa12.79□□□□□ -0.36
TNFRSF1A-209ENST00000536717 SPINK13Q1W4C9 94 aa12.79□□□□□ -0.36
TNFRSF1A-209ENST00000536717 TMEM78Q5T7P6 136 aa12.79□□□□□ -0.36
TNFRSF1A-209ENST00000536717 LGALS9CQ6DKI2 356 aa12.79□□□□□ -0.36
TNFRSF1A-209ENST00000536717 C9orf47Q6ZRZ4 202 aa12.79□□□□□ -0.36
TNFRSF1A-209ENST00000536717 IGF2BP2-AS1Q96M15 143 aa12.79□□□□□ -0.36
TNFRSF1A-209ENST00000536717 LINC00477Q96M19 166 aa12.79□□□□□ -0.36
TNFRSF1A-209ENST00000536717 EPDR1Q9UM22 224 aa12.79□□□□□ -0.36
TNFRSF1A-209ENST00000536717 GOLT1BQ9Y3E0 138 aa12.79□□□□□ -0.36
TNFRSF1A-209ENST00000536717 TRAV10A0A0B4J240 114 aa12.78□□□□□ -0.36
TNFRSF1A-209ENST00000536717 IGLL5B9A064 214 aa12.78□□□□□ -0.36
TNFRSF1A-209ENST00000536717 TCRAP04437 139 aa12.78□□□□□ -0.36
TNFRSF1A-209ENST00000536717 ERCC8Q13216 396 aa12.78□□□□□ -0.36
TNFRSF1A-209ENST00000536717 GOLT1AQ6ZVE7 132 aa12.78□□□□□ -0.36
TNFRSF1A-209ENST00000536717 LYPD6BQ8NI32 183 aa12.78□□□□□ -0.36
TNFRSF1A-209ENST00000536717 TCEAL7Q9BRU2 100 aa12.78□□□□□ -0.36
TNFRSF1A-209ENST00000536717 APLNQ9ULZ1 77 aa12.78□□□□□ -0.36
TNFRSF1A-209ENST00000536717 DNAH10Q8IVF4 4471 aa12.78□□□□□ -0.36
TNFRSF1A-209ENST00000536717 F6UZH7 168 aa12.78□□□□□ -0.36
TNFRSF1A-209ENST00000536717 ATP5G3P48201 142 aa12.78□□□□□ -0.36
TNFRSF1A-209ENST00000536717 EMP1P54849 157 aa12.78□□□□□ -0.36
TNFRSF1A-209ENST00000536717 TCTAP57738 103 aa12.78□□□□□ -0.36
TNFRSF1A-209ENST00000536717 CYB561D1Q8N8Q1 229 aa12.78□□□□□ -0.36
TNFRSF1A-209ENST00000536717 HIST1H2BAQ96A08 127 aa12.78□□□□□ -0.36
TNFRSF1A-209ENST00000536717 VGLL1Q99990 258 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms