RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 GNPNAT1Q96EK6 184 aaPredicted RBP2.37□□□□□ -2.03
USP48-215ENST00000534705 Q96M85 177 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 GPR82Q96P67 336 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 TBX5Q99593 518 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 KIR2DL4Q99706 377 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 SPIN2AQ99865 258 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 SMR3AQ99954 134 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 SPIN2BQ9BPZ2 258 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 HSPB9Q9BQS6 159 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 C19orf24Q9BVV8 132 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 ZNF442Q9H7R0 627 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 ST20Q9HBF5 79 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 FAM206AQ9NX38 181 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 FBN1P35555 2871 aaKnown RBP2.36□□□□□ -2.03
USP48-215ENST00000534705 JMJD1CQ15652 2540 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 IGHV3OR16-13A0A075B7E8 117 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 TRAV27A0A087WT01 109 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 MEIS3P1A6NDR6 274 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 C2orf70A6NJV1 201 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 H3BRM9 83 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 C15orf65H3BRN8 121 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 GNG7O60262 68 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 SLC16A7O60669 478 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 SERF1AO75920 110 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 S1PR2O95136 353 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 NRASP01111 189 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 ISG15P05161 165 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 CSN2P05814 226 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 MRPL3P09001 348 aaKnown RBP2.36□□□□□ -2.03
USP48-215ENST00000534705 OR5AL1P0C617 328 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 C3orf79P0CE67 100 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 IGLL1P15814 213 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 VDAC1P21796 283 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 F2RP25116 425 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 HRH1P35367 487 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 ZNF93P35789 620 aaPredicted RBP2.36□□□□□ -2.03
USP48-215ENST00000534705 FABP6P51161 128 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 ZNF83P51522 516 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 ZNF121P58317 390 aaPredicted RBP2.36□□□□□ -2.03
USP48-215ENST00000534705 S100A10P60903 97 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 LCN6P62502 163 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 FMODQ06828 376 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 RAB31Q13636 194 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 ZNF266Q14584 549 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 ZNF726P1Q15940 193 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 BATFQ16520 125 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 IAH1Q2TAA2 248 aaPredicted RBP2.36□□□□□ -2.03
USP48-215ENST00000534705 SPIN3Q5JUX0 258 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 SSX8Q7RTT4 187 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 MDP1Q86V88 176 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 ZNF709Q8N972 641 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 OR8B3Q8NGG8 313 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 OR5H2Q8NGV7 314 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 OR10AC1Q8NH08 325 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 OR8S1Q8NH09 359 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 OR4K13Q8NH42 304 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 OR51E1Q8TCB6 317 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 ZNF418Q8TF45 676 aaPredicted RBP2.36□□□□□ -2.03
USP48-215ENST00000534705 IL22RA2Q969J5 263 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 GALMQ96C23 342 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 SLC25A44Q96H78 314 aaPredicted RBP2.36□□□□□ -2.03
USP48-215ENST00000534705 VSIG2Q96IQ7 327 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 ADTRPQ96IZ2 230 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 OR8B2Q96RD0 313 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 CCL19Q99731 98 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 COMMD5Q9GZQ3 224 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 OR51I2Q9H344 312 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 TXNIPQ9H3M7 391 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 SPANXA1Q9NS26 97 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 MRPL16Q9NX20 251 aaKnown RBP2.36□□□□□ -2.03
USP48-215ENST00000534705 CALYQ9NYX4 217 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 AK3Q9UIJ7 227 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 ERG28Q9UKR5 140 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 HHLA2Q9UM44 414 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 MED31Q9Y3C7 131 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 LINC00312Q9Y6C7 94 aa2.36□□□□□ -2.03
USP48-215ENST00000534705 A0A087WX48 190 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 IGHV7-81A0A0B4J1V7 117 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 RBMY1BA6NDE4 496 aaKnown RBP2.35□□□□□ -2.03
USP48-215ENST00000534705 RBMY1EA6NEQ0 496 aaKnown RBP2.35□□□□□ -2.03
USP48-215ENST00000534705 CD300LBA8K4G0 201 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 M0R1B8 84 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 ZNF324O75467 553 aaPredicted RBP2.35□□□□□ -2.03
USP48-215ENST00000534705 LY6HO94772 140 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 HAND1O96004 215 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 CA2P00918 260 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 KRASP01116 189 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 IFNA5P01569 189 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 PRH1P02810 166 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 MT-ND6P03923 174 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 RBMY1DP0C7P1 496 aaKnown RBP2.35□□□□□ -2.03
USP48-215ENST00000534705 RBMY1A1P0DJD3 496 aaKnown RBP2.35□□□□□ -2.03
USP48-215ENST00000534705 NPY1RP25929 384 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 CRYBB3P26998 211 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 PIGPP57054 158 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 SERF2P84101 59 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 RPL18AQ02543 176 aaKnown RBP2.35□□□□□ -2.03
USP48-215ENST00000534705 TGFBR3Q03167 851 aa2.35□□□□□ -2.03
USP48-215ENST00000534705 RSPO1Q2MKA7 263 aaPredicted RBP2.35□□□□□ -2.03
USP48-215ENST00000534705 MPV17L2Q567V2 206 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms