RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 PGPA6NDG6 321 aa10.1□□□□□ -0.79
VPS11-205ENST00000534551 GGTLC3B5MD39 225 aa10.1□□□□□ -0.79
VPS11-205ENST00000534551 CXorf1O96002 111 aa10.1□□□□□ -0.79
VPS11-205ENST00000534551 TPT1P13693 172 aaKnown RBP10.1□□□□□ -0.79
VPS11-205ENST00000534551 CDKN1BP46527 198 aa10.1□□□□□ -0.79
VPS11-205ENST00000534551 UBE2G2P60604 165 aa10.1□□□□□ -0.79
VPS11-205ENST00000534551 STOML3Q8TAV4 291 aa10.1□□□□□ -0.79
VPS11-205ENST00000534551 FAM213BQ8TBF2 198 aa10.1□□□□□ -0.79
VPS11-205ENST00000534551 GOLT1BQ9Y3E0 138 aa10.1□□□□□ -0.79
VPS11-205ENST00000534551 ZNF705GA8MUZ8 300 aaPredicted RBP10.09□□□□□ -0.79
VPS11-205ENST00000534551 DIRC3C9JPN6 131 aa10.09□□□□□ -0.79
VPS11-205ENST00000534551 SEC11BP0C7V7 166 aa10.09□□□□□ -0.79
VPS11-205ENST00000534551 MIFP14174 115 aa10.09□□□□□ -0.79
VPS11-205ENST00000534551 EMP1P54849 157 aa10.09□□□□□ -0.79
VPS11-205ENST00000534551 NANOS2P60321 138 aaKnown RBP10.09□□□□□ -0.79
VPS11-205ENST00000534551 BTN1A1Q13410 526 aa10.09□□□□□ -0.79
VPS11-205ENST00000534551 Q6ZQT7 251 aa10.09□□□□□ -0.79
VPS11-205ENST00000534551 ZNF767PQ75MW2 155 aa10.09□□□□□ -0.79
VPS11-205ENST00000534551 SUN5Q8TC36 379 aa10.09□□□□□ -0.79
VPS11-205ENST00000534551 TMEM208Q9BTX3 173 aa10.09□□□□□ -0.79
VPS11-205ENST00000534551 YTHDF2Q9Y5A9 579 aaKnown RBP10.09□□□□□ -0.79
VPS11-205ENST00000534551 KMT2CQ8NEZ4 4911 aaKnown RBP10.08□□□□□ -0.8
VPS11-205ENST00000534551 DNAH1Q9P2D7 4330 aa10.08□□□□□ -0.8
VPS11-205ENST00000534551 TRAV8-1A0A0A6YYK1 113 aa10.08□□□□□ -0.8
VPS11-205ENST00000534551 AMBPP02760 352 aa10.08□□□□□ -0.8
VPS11-205ENST00000534551 CASC10Q5T4H9 136 aa10.08□□□□□ -0.8
VPS11-205ENST00000534551 C9orf47Q6ZRZ4 202 aa10.08□□□□□ -0.8
VPS11-205ENST00000534551 GOLT1AQ6ZVE7 132 aa10.08□□□□□ -0.8
VPS11-205ENST00000534551 LYPD1Q8N2G4 141 aa10.08□□□□□ -0.8
VPS11-205ENST00000534551 FAM19A4Q96LR4 140 aa10.08□□□□□ -0.8
VPS11-205ENST00000534551 SGK494Q96LW2 274 aa10.08□□□□□ -0.8
VPS11-205ENST00000534551 ODF3Q96PU9 254 aa10.08□□□□□ -0.8
VPS11-205ENST00000534551 BOLA1Q9Y3E2 137 aa10.08□□□□□ -0.8
VPS11-205ENST00000534551 ALMS1Q8TCU4 4167 aa10.07□□□□□ -0.8
VPS11-205ENST00000534551 TRAV12-3A0A0B4J271 114 aa10.07□□□□□ -0.8
VPS11-205ENST00000534551 SLC25A5P05141 298 aaKnown RBP10.07□□□□□ -0.8
VPS11-205ENST00000534551 AZU1P20160 251 aa10.07□□□□□ -0.8
VPS11-205ENST00000534551 LEPP41159 167 aa10.07□□□□□ -0.8
VPS11-205ENST00000534551 CSN1S1P47710 185 aa10.07□□□□□ -0.8
VPS11-205ENST00000534551 FAM74A1Q5RGS3 127 aa10.07□□□□□ -0.8
VPS11-205ENST00000534551 ZFAND2AQ8N6M9 145 aa10.07□□□□□ -0.8
VPS11-205ENST00000534551 CMTM2Q8TAZ6 248 aa10.07□□□□□ -0.8
VPS11-205ENST00000534551 TMEM167BQ9NRX6 74 aa10.07□□□□□ -0.8
VPS11-205ENST00000534551 ZNF492Q9P255 531 aa10.07□□□□□ -0.8
VPS11-205ENST00000534551 LOC102723971A0A1B0GUV8 181 aa10.06□□□□□ -0.8
VPS11-205ENST00000534551 CXorf65A6NEN9 183 aa10.06□□□□□ -0.8
VPS11-205ENST00000534551 HBE1P02100 147 aa10.06□□□□□ -0.8
VPS11-205ENST00000534551 HTN1P15515 57 aa10.06□□□□□ -0.8
VPS11-205ENST00000534551 TMEM78Q5T7P6 136 aa10.06□□□□□ -0.8
VPS11-205ENST00000534551 NEU1Q99519 415 aa10.06□□□□□ -0.8
VPS11-205ENST00000534551 C7orf71A4D174 169 aa10.05□□□□□ -0.8
VPS11-205ENST00000534551 KLLNB2CW77 178 aa10.05□□□□□ -0.8
VPS11-205ENST00000534551 UMAD1C9J7I0 102 aa10.05□□□□□ -0.8
VPS11-205ENST00000534551 F6UZH7 168 aa10.05□□□□□ -0.8
VPS11-205ENST00000534551 C3orf84H3BNL1 204 aa10.05□□□□□ -0.8
VPS11-205ENST00000534551 TSPOP30536 169 aa10.05□□□□□ -0.8
VPS11-205ENST00000534551 ZNF138P52744 262 aa10.05□□□□□ -0.8
VPS11-205ENST00000534551 SUMO1P63165 101 aaKnown RBP10.05□□□□□ -0.8
VPS11-205ENST00000534551 EIF5AP63241 154 aaKnown RBP10.05□□□□□ -0.8
VPS11-205ENST00000534551 RRN3P1Q2M238 152 aa10.05□□□□□ -0.8
VPS11-205ENST00000534551 SLC51BQ86UW2 128 aa10.05□□□□□ -0.8
VPS11-205ENST00000534551 C5orf17Q8NAS9 161 aa10.05□□□□□ -0.8
VPS11-205ENST00000534551 C11orf45Q8TAV5 145 aa10.05□□□□□ -0.8
VPS11-205ENST00000534551 LINC01587Q99440 93 aa10.05□□□□□ -0.8
VPS11-205ENST00000534551 PLAC8L1A1L4L8 177 aa10.04□□□□□ -0.8
VPS11-205ENST00000534551 FAM74A7A6NL05 159 aa10.04□□□□□ -0.8
VPS11-205ENST00000534551 TCRAP04437 139 aa10.04□□□□□ -0.8
VPS11-205ENST00000534551 CRISP2P16562 243 aa10.04□□□□□ -0.8
VPS11-205ENST00000534551 RNASE4P34096 147 aaKnown RBP10.04□□□□□ -0.8
VPS11-205ENST00000534551 ATP5G3P48201 142 aa10.04□□□□□ -0.8
VPS11-205ENST00000534551 SFT2D1Q8WV19 159 aa10.04□□□□□ -0.8
VPS11-205ENST00000534551 TVP23CQ96ET8 276 aa10.04□□□□□ -0.8
VPS11-205ENST00000534551 LINC00477Q96M19 166 aa10.04□□□□□ -0.8
VPS11-205ENST00000534551 TENM2Q9NT68 2774 aa10.04□□□□□ -0.8
VPS11-205ENST00000534551 RBAKDNA6NC62 111 aa10.03□□□□□ -0.8
VPS11-205ENST00000534551 FAM222AQ5U5X8 452 aa10.03□□□□□ -0.8
VPS11-205ENST00000534551 Q6ZTC4 211 aa10.03□□□□□ -0.8
VPS11-205ENST00000534551 RXFP4Q8TDU9 374 aa10.03□□□□□ -0.8
VPS11-205ENST00000534551 TRAV34A0A0B4J273 112 aa10.02□□□□□ -0.81
VPS11-205ENST00000534551 A0A1W2PRE2 83 aa10.02□□□□□ -0.81
VPS11-205ENST00000534551 SMIM9A6NGZ8 99 aa10.02□□□□□ -0.81
VPS11-205ENST00000534551 IGLV2-11P01706 119 aa10.02□□□□□ -0.81
VPS11-205ENST00000534551 GPX1P07203 203 aa10.02□□□□□ -0.81
VPS11-205ENST00000534551 SULT1A2P50226 295 aa10.02□□□□□ -0.81
VPS11-205ENST00000534551 TAS2R60P59551 318 aa10.02□□□□□ -0.81
VPS11-205ENST00000534551 C12orf74Q32Q52 190 aa10.02□□□□□ -0.81
VPS11-205ENST00000534551 TMEM256Q8N2U0 113 aa10.02□□□□□ -0.81
VPS11-205ENST00000534551 PHLDA1Q8WV24 401 aaPredicted RBP10.02□□□□□ -0.81
VPS11-205ENST00000534551 MBD3L1Q8WWY6 194 aa10.02□□□□□ -0.81
VPS11-205ENST00000534551 LINC00479Q96M42 142 aa10.02□□□□□ -0.81
VPS11-205ENST00000534551 C8orf49Q96NF6 230 aa10.02□□□□□ -0.81
VPS11-205ENST00000534551 H7BYZ3 331 aa10.01□□□□□ -0.81
VPS11-205ENST00000534551 PEX7O00628 323 aa10.01□□□□□ -0.81
VPS11-205ENST00000534551 PAGE4O60829 102 aa10.01□□□□□ -0.81
VPS11-205ENST00000534551 ZNF324O75467 553 aaPredicted RBP10.01□□□□□ -0.81
VPS11-205ENST00000534551 H2AFB1P0C5Y9 115 aa10.01□□□□□ -0.81
VPS11-205ENST00000534551 CCL20P78556 96 aa10.01□□□□□ -0.81
VPS11-205ENST00000534551 ALKAL2Q6UX46 152 aa10.01□□□□□ -0.81
VPS11-205ENST00000534551 DPPA3Q6W0C5 159 aa10.01□□□□□ -0.81
VPS11-205ENST00000534551 CYB561D1Q8N8Q1 229 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms