RNA–Protein interactions for RNA: ENST00000534390.2

PAX6-230, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-230ENST00000534390 VGLL1Q99990 258 aa11.34□□□□□ -0.59
PAX6-230ENST00000534390 AGPAT4-IT1Q9H0P7 198 aa11.34□□□□□ -0.59
PAX6-230ENST00000534390 SH3BGRL3Q9H299 93 aa11.34□□□□□ -0.59
PAX6-230ENST00000534390 TNFSF18Q9UNG2 199 aa11.34□□□□□ -0.59
PAX6-230ENST00000534390 RNF222A6NCQ9 220 aa11.33□□□□□ -0.6
PAX6-230ENST00000534390 SMLR1H3BR10 107 aa11.33□□□□□ -0.6
PAX6-230ENST00000534390 ARPC5O15511 151 aa11.33□□□□□ -0.6
PAX6-230ENST00000534390 RNASE4P34096 147 aaKnown RBP11.33□□□□□ -0.6
PAX6-230ENST00000534390 CDC34P49427 236 aaPredicted RBP11.33□□□□□ -0.6
PAX6-230ENST00000534390 TCTAP57738 103 aa11.33□□□□□ -0.6
PAX6-230ENST00000534390 RPL7L1Q6DKI1 246 aaKnown RBP11.33□□□□□ -0.6
PAX6-230ENST00000534390 CCDC28AQ8IWP9 274 aa11.33□□□□□ -0.6
PAX6-230ENST00000534390 LINC00477Q96M19 166 aa11.33□□□□□ -0.6
PAX6-230ENST00000534390 C20orf144Q9BQM9 153 aa11.33□□□□□ -0.6
PAX6-230ENST00000534390 APLNQ9ULZ1 77 aa11.33□□□□□ -0.6
PAX6-230ENST00000534390 C7orf71A4D174 169 aa11.32□□□□□ -0.6
PAX6-230ENST00000534390 LYRM9A8MSI8 78 aa11.32□□□□□ -0.6
PAX6-230ENST00000534390 SLC25A5P05141 298 aaKnown RBP11.32□□□□□ -0.6
PAX6-230ENST00000534390 GPX1P07203 203 aa11.32□□□□□ -0.6
PAX6-230ENST00000534390 BTN1A1Q13410 526 aa11.32□□□□□ -0.6
PAX6-230ENST00000534390 LGALS9CQ6DKI2 356 aa11.32□□□□□ -0.6
PAX6-230ENST00000534390 PQLC2Q6ZP29 291 aa11.32□□□□□ -0.6
PAX6-230ENST00000534390 Q8TAT8 98 aa11.32□□□□□ -0.6
PAX6-230ENST00000534390 CMTM2Q8TAZ6 248 aa11.32□□□□□ -0.6
PAX6-230ENST00000534390 PSMG3Q9BT73 122 aaPredicted RBP11.32□□□□□ -0.6
PAX6-230ENST00000534390 NDUFAF3Q9BU61 184 aa11.32□□□□□ -0.6
PAX6-230ENST00000534390 ARL14EPLP0DKL9 152 aa11.31□□□□□ -0.6
PAX6-230ENST00000534390 FAM74A1Q5RGS3 127 aa11.31□□□□□ -0.6
PAX6-230ENST00000534390 C9orf47Q6ZRZ4 202 aa11.31□□□□□ -0.6
PAX6-230ENST00000534390 IQCF2Q8IXL9 164 aa11.31□□□□□ -0.6
PAX6-230ENST00000534390 LYPD1Q8N2G4 141 aa11.31□□□□□ -0.6
PAX6-230ENST00000534390 OR2G3Q8NGZ4 309 aa11.31□□□□□ -0.6
PAX6-230ENST00000534390 TMEM263Q8WUH6 116 aaKnown RBP11.31□□□□□ -0.6
PAX6-230ENST00000534390 NOP10Q9NPE3 64 aaKnown RBP11.31□□□□□ -0.6
PAX6-230ENST00000534390 MBP02144 154 aa11.3□□□□□ -0.6
PAX6-230ENST00000534390 ZNF138P52744 262 aa11.3□□□□□ -0.6
PAX6-230ENST00000534390 CD300CQ08708 224 aa11.3□□□□□ -0.6
PAX6-230ENST00000534390 ZNF493Q6ZR52 646 aa11.3□□□□□ -0.6
PAX6-230ENST00000534390 RAB24Q969Q5 203 aa11.3□□□□□ -0.6
PAX6-230ENST00000534390 GNPNAT1Q96EK6 184 aaPredicted RBP11.3□□□□□ -0.6
PAX6-230ENST00000534390 OTORQ9NRC9 128 aa11.3□□□□□ -0.6
PAX6-230ENST00000534390 TIMM8BQ9Y5J9 83 aaPredicted RBP11.3□□□□□ -0.6
PAX6-230ENST00000534390 PLAC8L1A1L4L8 177 aa11.29□□□□□ -0.6
PAX6-230ENST00000534390 PGPA6NDG6 321 aa11.29□□□□□ -0.6
PAX6-230ENST00000534390 SNURFLB1AK76 121 aa11.29□□□□□ -0.6
PAX6-230ENST00000534390 G3V3Q6 166 aa11.29□□□□□ -0.6
PAX6-230ENST00000534390 SERF2P84101 59 aa11.29□□□□□ -0.6
PAX6-230ENST00000534390 RNASE8Q8TDE3 154 aaKnown RBP11.29□□□□□ -0.6
PAX6-230ENST00000534390 RXFP4Q8TDU9 374 aa11.29□□□□□ -0.6
PAX6-230ENST00000534390 PYGO2Q9BRQ0 406 aa11.29□□□□□ -0.6
PAX6-230ENST00000534390 ZNF492Q9P255 531 aa11.29□□□□□ -0.6
PAX6-230ENST00000534390 HYDINQ4G0P3 5121 aa11.29□□□□□ -0.6
PAX6-230ENST00000534390 CBY3A6NI87 242 aa11.28□□□□□ -0.6
PAX6-230ENST00000534390 KLLNB2CW77 178 aa11.28□□□□□ -0.6
PAX6-230ENST00000534390 DIRC3C9JPN6 131 aa11.28□□□□□ -0.6
PAX6-230ENST00000534390 FAM19A4Q96LR4 140 aa11.28□□□□□ -0.6
PAX6-230ENST00000534390 ACTR3CQ9C0K3 210 aaPredicted RBP11.28□□□□□ -0.6
PAX6-230ENST00000534390 F5H768 121 aa11.27□□□□□ -0.61
PAX6-230ENST00000534390 RGS13O14921 159 aa11.27□□□□□ -0.61
PAX6-230ENST00000534390 GCHFRP30047 84 aa11.27□□□□□ -0.61
PAX6-230ENST00000534390 PRR9Q5T870 116 aa11.27□□□□□ -0.61
PAX6-230ENST00000534390 TMEM88Q6PEY1 159 aa11.27□□□□□ -0.61
PAX6-230ENST00000534390 GOLT1AQ6ZVE7 132 aa11.27□□□□□ -0.61
PAX6-230ENST00000534390 DNAH1Q9P2D7 4330 aa11.26□□□□□ -0.61
PAX6-230ENST00000534390 RBAKDNA6NC62 111 aa11.26□□□□□ -0.61
PAX6-230ENST00000534390 TAAR5O14804 337 aa11.26□□□□□ -0.61
PAX6-230ENST00000534390 CXorf1O96002 111 aa11.26□□□□□ -0.61
PAX6-230ENST00000534390 STAG3L2P0CL84 134 aa11.26□□□□□ -0.61
PAX6-230ENST00000534390 STAG3L3P0CL85 134 aa11.26□□□□□ -0.61
PAX6-230ENST00000534390 CRISP2P16562 243 aa11.26□□□□□ -0.61
PAX6-230ENST00000534390 GNG5P63218 68 aa11.26□□□□□ -0.61
PAX6-230ENST00000534390 AKR1C8PQ5T2L2 129 aa11.26□□□□□ -0.61
PAX6-230ENST00000534390 ZFAND2AQ8N6M9 145 aa11.26□□□□□ -0.61
PAX6-230ENST00000534390 GAGE12BA1L429 117 aa11.25□□□□□ -0.61
PAX6-230ENST00000534390 GAGE7O76087 117 aa11.25□□□□□ -0.61
PAX6-230ENST00000534390 ATP5G1P05496 136 aa11.25□□□□□ -0.61
PAX6-230ENST00000534390 GAGE12FP0CL80 117 aa11.25□□□□□ -0.61
PAX6-230ENST00000534390 GAGE12GP0CL81 117 aa11.25□□□□□ -0.61
PAX6-230ENST00000534390 GAGE12IP0CL82 117 aa11.25□□□□□ -0.61
PAX6-230ENST00000534390 ATP5G3P48201 142 aa11.25□□□□□ -0.61
PAX6-230ENST00000534390 SSX7Q7RTT5 188 aa11.25□□□□□ -0.61
PAX6-230ENST00000534390 UBE2DNLQ8IWF7 75 aa11.25□□□□□ -0.61
PAX6-230ENST00000534390 EIF4E3Q8N5X7 224 aaKnown RBP11.25□□□□□ -0.61
PAX6-230ENST00000534390 ZNF680Q8NEM1 530 aa11.25□□□□□ -0.61
PAX6-230ENST00000534390 ZNF324O75467 553 aaPredicted RBP11.24□□□□□ -0.61
PAX6-230ENST00000534390 NMBP08949 121 aa11.24□□□□□ -0.61
PAX6-230ENST00000534390 P0DMU3 169 aa11.24□□□□□ -0.61
PAX6-230ENST00000534390 FAM231AP0DMU4 169 aa11.24□□□□□ -0.61
PAX6-230ENST00000534390 FAM231CP0DMU5 169 aa11.24□□□□□ -0.61
PAX6-230ENST00000534390 Q6ZQT7 251 aa11.24□□□□□ -0.61
PAX6-230ENST00000534390 FAM210BQ96KR6 192 aa11.24□□□□□ -0.61
PAX6-230ENST00000534390 ARPC5LQ9BPX5 153 aa11.24□□□□□ -0.61
PAX6-230ENST00000534390 GSN-AS1Q9NRJ2 163 aa11.24□□□□□ -0.61
PAX6-230ENST00000534390 TRAV8-1A0A0A6YYK1 113 aa11.23□□□□□ -0.61
PAX6-230ENST00000534390 MUC21Q5SSG8 566 aa11.23□□□□□ -0.61
PAX6-230ENST00000534390 SGK494Q96LW2 274 aa11.23□□□□□ -0.61
PAX6-230ENST00000534390 TMEM167BQ9NRX6 74 aa11.23□□□□□ -0.61
PAX6-230ENST00000534390 NAGKQ9UJ70 344 aa11.23□□□□□ -0.61
PAX6-230ENST00000534390 IGHV1OR15-1A0A075B7D0 117 aa11.22□□□□□ -0.61
PAX6-230ENST00000534390 TRGV1A0A0A0MS02 117 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms