RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 NOP10Q9NPE3 64 aaKnown RBP9.87□□□□□ -0.83
SF3B2-215ENST00000534307 MBD2Q9UBB5 411 aa9.87□□□□□ -0.83
SF3B2-215ENST00000534307 TIMM9Q9Y5J7 89 aa9.87□□□□□ -0.83
SF3B2-215ENST00000534307 TRAV12-3A0A0B4J271 114 aa9.86□□□□□ -0.83
SF3B2-215ENST00000534307 ATP5G1P05496 136 aa9.86□□□□□ -0.83
SF3B2-215ENST00000534307 NBEAP1P0C6P0 100 aa9.86□□□□□ -0.83
SF3B2-215ENST00000534307 RPL12P30050 165 aaKnown RBP9.86□□□□□ -0.83
SF3B2-215ENST00000534307 ATP5G3P48201 142 aa9.86□□□□□ -0.83
SF3B2-215ENST00000534307 LGALS9BQ3B8N2 356 aa9.86□□□□□ -0.83
SF3B2-215ENST00000534307 Q6ZR54 194 aa9.86□□□□□ -0.83
SF3B2-215ENST00000534307 C9orf47Q6ZRZ4 202 aa9.86□□□□□ -0.83
SF3B2-215ENST00000534307 ZNF503Q96F45 646 aa9.86□□□□□ -0.83
SF3B2-215ENST00000534307 LINC00477Q96M19 166 aa9.86□□□□□ -0.83
SF3B2-215ENST00000534307 PYGO2Q9BRQ0 406 aa9.86□□□□□ -0.83
SF3B2-215ENST00000534307 OR51M1Q9H341 326 aa9.86□□□□□ -0.83
SF3B2-215ENST00000534307 FUT9Q9Y231 359 aa9.86□□□□□ -0.83
SF3B2-215ENST00000534307 IGKV2-40A0A087WW87 121 aaPredicted RBP9.85□□□□□ -0.83
SF3B2-215ENST00000534307 C17orf112F2Z3M2 114 aa9.85□□□□□ -0.83
SF3B2-215ENST00000534307 F5H768 121 aa9.85□□□□□ -0.83
SF3B2-215ENST00000534307 J3KRW8 73 aa9.85□□□□□ -0.83
SF3B2-215ENST00000534307 RTL8CO15255 209 aa9.85□□□□□ -0.83
SF3B2-215ENST00000534307 ZNF324O75467 553 aaPredicted RBP9.85□□□□□ -0.83
SF3B2-215ENST00000534307 IGKV2D-40P01614 121 aaPredicted RBP9.85□□□□□ -0.83
SF3B2-215ENST00000534307 SLC25A5P05141 298 aaKnown RBP9.85□□□□□ -0.83
SF3B2-215ENST00000534307 CRISP2P16562 243 aa9.85□□□□□ -0.83
SF3B2-215ENST00000534307 ICAM4Q14773 271 aa9.85□□□□□ -0.83
SF3B2-215ENST00000534307 PHYHIPLQ96FC7 376 aa9.85□□□□□ -0.83
SF3B2-215ENST00000534307 PAXXQ9BUH6 204 aa9.85□□□□□ -0.83
SF3B2-215ENST00000534307 AAMDCQ9H7C9 122 aa9.85□□□□□ -0.83
SF3B2-215ENST00000534307 A0A1B0GVY2 172 aa9.84□□□□□ -0.83
SF3B2-215ENST00000534307 C7orf71A4D174 169 aa9.84□□□□□ -0.83
SF3B2-215ENST00000534307 OR10J4P0C629 311 aa9.84□□□□□ -0.83
SF3B2-215ENST00000534307 CD300CQ08708 224 aa9.84□□□□□ -0.83
SF3B2-215ENST00000534307 Q5BKY6 102 aa9.84□□□□□ -0.83
SF3B2-215ENST00000534307 FAM122CQ6P4D5 195 aa9.84□□□□□ -0.83
SF3B2-215ENST00000534307 LINC00336Q6ZUF6 198 aa9.84□□□□□ -0.83
SF3B2-215ENST00000534307 UBE2DNLQ8IWF7 75 aa9.84□□□□□ -0.83
SF3B2-215ENST00000534307 ZFAND2AQ8N6M9 145 aa9.84□□□□□ -0.83
SF3B2-215ENST00000534307 C11orf72Q8NBR9 251 aa9.84□□□□□ -0.83
SF3B2-215ENST00000534307 RNF141Q8WVD5 230 aa9.84□□□□□ -0.83
SF3B2-215ENST00000534307 VGLL1Q99990 258 aa9.84□□□□□ -0.83
SF3B2-215ENST00000534307 LINC00467Q9BRT7 94 aa9.84□□□□□ -0.83
SF3B2-215ENST00000534307 SMIM3Q9BZL3 60 aa9.84□□□□□ -0.83
SF3B2-215ENST00000534307 WFDC1Q9HC57 220 aa9.84□□□□□ -0.83
SF3B2-215ENST00000534307 M0R2N4 97 aa9.83□□□□□ -0.84
SF3B2-215ENST00000534307 NMBP08949 121 aa9.83□□□□□ -0.84
SF3B2-215ENST00000534307 DAZ2Q13117 558 aaKnown RBP9.83□□□□□ -0.84
SF3B2-215ENST00000534307 BTN1A1Q13410 526 aa9.83□□□□□ -0.84
SF3B2-215ENST00000534307 FFAR4Q5NUL3 377 aa9.83□□□□□ -0.84
SF3B2-215ENST00000534307 PRR9Q5T870 116 aa9.83□□□□□ -0.84
SF3B2-215ENST00000534307 CCDC28AQ8IWP9 274 aa9.83□□□□□ -0.84
SF3B2-215ENST00000534307 IGLV2-18A0A075B6J9 118 aa9.82□□□□□ -0.84
SF3B2-215ENST00000534307 G3V3Q6 166 aa9.82□□□□□ -0.84
SF3B2-215ENST00000534307 FAM3BP58499 235 aaPredicted RBP9.82□□□□□ -0.84
SF3B2-215ENST00000534307 ZNF492Q9P255 531 aa9.82□□□□□ -0.84
SF3B2-215ENST00000534307 SNURFLB1AK76 121 aa9.81□□□□□ -0.84
SF3B2-215ENST00000534307 OR7C2O60412 319 aa9.81□□□□□ -0.84
SF3B2-215ENST00000534307 IFNA5P01569 189 aa9.81□□□□□ -0.84
SF3B2-215ENST00000534307 GIPP09681 153 aaPredicted RBP9.81□□□□□ -0.84
SF3B2-215ENST00000534307 HOXA5P20719 270 aa9.81□□□□□ -0.84
SF3B2-215ENST00000534307 ANXA2RQ3ZCQ2 193 aa9.81□□□□□ -0.84
SF3B2-215ENST00000534307 LYPD1Q8N2G4 141 aa9.81□□□□□ -0.84
SF3B2-215ENST00000534307 SCGB1C1Q8TD33 95 aa9.81□□□□□ -0.84
SF3B2-215ENST00000534307 TRBV7-9A0A0J9YWB2 115 aa9.8□□□□□ -0.84
SF3B2-215ENST00000534307 GAGE12BA1L429 117 aa9.8□□□□□ -0.84
SF3B2-215ENST00000534307 RBAKDNA6NC62 111 aa9.8□□□□□ -0.84
SF3B2-215ENST00000534307 GAGE7O76087 117 aa9.8□□□□□ -0.84
SF3B2-215ENST00000534307 GAGE12FP0CL80 117 aa9.8□□□□□ -0.84
SF3B2-215ENST00000534307 GAGE12GP0CL81 117 aa9.8□□□□□ -0.84
SF3B2-215ENST00000534307 GAGE12IP0CL82 117 aa9.8□□□□□ -0.84
SF3B2-215ENST00000534307 RNASE4P34096 147 aaKnown RBP9.8□□□□□ -0.84
SF3B2-215ENST00000534307 ZNF138P52744 262 aa9.8□□□□□ -0.84
SF3B2-215ENST00000534307 UBE2L3P68036 154 aaKnown RBP9.8□□□□□ -0.84
SF3B2-215ENST00000534307 KHDC3LQ587J8 217 aa9.8□□□□□ -0.84
SF3B2-215ENST00000534307 TMEM78Q5T7P6 136 aa9.8□□□□□ -0.84
SF3B2-215ENST00000534307 Q6ZQT7 251 aa9.8□□□□□ -0.84
SF3B2-215ENST00000534307 Q6ZTI0 123 aa9.8□□□□□ -0.84
SF3B2-215ENST00000534307 EIF4E3Q8N5X7 224 aaKnown RBP9.8□□□□□ -0.84
SF3B2-215ENST00000534307 ZNF680Q8NEM1 530 aa9.8□□□□□ -0.84
SF3B2-215ENST00000534307 ZNRF2Q8NHG8 242 aa9.8□□□□□ -0.84
SF3B2-215ENST00000534307 Q8TAT8 98 aa9.8□□□□□ -0.84
SF3B2-215ENST00000534307 C18orf15Q96N68 181 aa9.8□□□□□ -0.84
SF3B2-215ENST00000534307 Q9H3A6 140 aa9.8□□□□□ -0.84
SF3B2-215ENST00000534307 GSN-AS1Q9NRJ2 163 aa9.8□□□□□ -0.84
SF3B2-215ENST00000534307 LRP1BQ9NZR2 4599 aa9.79□□□□□ -0.84
SF3B2-215ENST00000534307 EIF3GO75821 320 aaKnown RBP eCLIP9.79□□□□□ -0.84
SF3B2-215ENST00000534307 NUDT3O95989 172 aa9.79□□□□□ -0.84
SF3B2-215ENST00000534307 GPX1P07203 203 aa9.79□□□□□ -0.84
SF3B2-215ENST00000534307 M6PRP20645 277 aa9.79□□□□□ -0.84
SF3B2-215ENST00000534307 TAS2R45P59539 299 aa9.79□□□□□ -0.84
SF3B2-215ENST00000534307 RANP62826 216 aaKnown RBP9.79□□□□□ -0.84
SF3B2-215ENST00000534307 TMPRSS5Q9H3S3 457 aa9.79□□□□□ -0.84
SF3B2-215ENST00000534307 TRAV26-1A0A087WT03 109 aa9.78□□□□□ -0.84
SF3B2-215ENST00000534307 PRSS29PA6NIE9 313 aa9.78□□□□□ -0.84
SF3B2-215ENST00000534307 H3BNG1 76 aa9.78□□□□□ -0.84
SF3B2-215ENST00000534307 IBA57Q5T440 356 aaKnown RBP9.78□□□□□ -0.84
SF3B2-215ENST00000534307 RXFP4Q8TDU9 374 aa9.78□□□□□ -0.84
SF3B2-215ENST00000534307 AQP10Q96PS8 301 aa9.78□□□□□ -0.84
SF3B2-215ENST00000534307 ATG101Q9BSB4 218 aa9.78□□□□□ -0.84
SF3B2-215ENST00000534307 TP53TG3Q9ULZ0 132 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms