RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 PCLOQ9Y6V0 5065 aa6.71□□□□□ -1.33
SSBP3-215ENST00000533946 ABCA13Q86UQ4 5058 aa6.71□□□□□ -1.34
SSBP3-215ENST00000533946 A0A0J9YY99 117 aa6.71□□□□□ -1.34
SSBP3-215ENST00000533946 LYRM9A8MSI8 78 aa6.71□□□□□ -1.34
SSBP3-215ENST00000533946 KLLNB2CW77 178 aa6.71□□□□□ -1.34
SSBP3-215ENST00000533946 NUDT3O95989 172 aa6.71□□□□□ -1.34
SSBP3-215ENST00000533946 NBEAP1P0C6P0 100 aa6.71□□□□□ -1.34
SSBP3-215ENST00000533946 RPL12P30050 165 aaKnown RBP6.71□□□□□ -1.34
SSBP3-215ENST00000533946 RANP62826 216 aaKnown RBP6.71□□□□□ -1.34
SSBP3-215ENST00000533946 SSX7Q7RTT5 188 aa6.71□□□□□ -1.34
SSBP3-215ENST00000533946 LINC00612Q8N6U2 182 aa6.71□□□□□ -1.34
SSBP3-215ENST00000533946 ATP5SQ99766 215 aa6.71□□□□□ -1.34
SSBP3-215ENST00000533946 PAXXQ9BUH6 204 aa6.71□□□□□ -1.34
SSBP3-215ENST00000533946 KRTAP1-5Q9BYS1 174 aa6.71□□□□□ -1.34
SSBP3-215ENST00000533946 SLC25A31Q9H0C2 315 aa6.71□□□□□ -1.34
SSBP3-215ENST00000533946 OR51M1Q9H341 326 aa6.71□□□□□ -1.34
SSBP3-215ENST00000533946 TMPRSS5Q9H3S3 457 aa6.71□□□□□ -1.34
SSBP3-215ENST00000533946 FUT9Q9Y231 359 aa6.71□□□□□ -1.34
SSBP3-215ENST00000533946 LINC00588Q9Y4M8 146 aa6.71□□□□□ -1.34
SSBP3-215ENST00000533946 TIMM9Q9Y5J7 89 aa6.71□□□□□ -1.34
SSBP3-215ENST00000533946 G3V3Q6 166 aa6.7□□□□□ -1.34
SSBP3-215ENST00000533946 H7BYZ3 331 aa6.7□□□□□ -1.34
SSBP3-215ENST00000533946 RLN2P04090 185 aa6.7□□□□□ -1.34
SSBP3-215ENST00000533946 P0DMU3 169 aa6.7□□□□□ -1.34
SSBP3-215ENST00000533946 FAM231AP0DMU4 169 aa6.7□□□□□ -1.34
SSBP3-215ENST00000533946 FAM231CP0DMU5 169 aa6.7□□□□□ -1.34
SSBP3-215ENST00000533946 TMEM263Q8WUH6 116 aaKnown RBP6.7□□□□□ -1.34
SSBP3-215ENST00000533946 TVP23CQ96ET8 276 aa6.7□□□□□ -1.34
SSBP3-215ENST00000533946 SGK494Q96LW2 274 aa6.7□□□□□ -1.34
SSBP3-215ENST00000533946 TIMM8BQ9Y5J9 83 aaPredicted RBP6.7□□□□□ -1.34
SSBP3-215ENST00000533946 TRAV26-1A0A087WT03 109 aa6.69□□□□□ -1.34
SSBP3-215ENST00000533946 TRAV8-1A0A0A6YYK1 113 aa6.69□□□□□ -1.34
SSBP3-215ENST00000533946 C7orf71A4D174 169 aa6.69□□□□□ -1.34
SSBP3-215ENST00000533946 CBY3A6NI87 242 aa6.69□□□□□ -1.34
SSBP3-215ENST00000533946 ZNF253O75346 499 aa6.69□□□□□ -1.34
SSBP3-215ENST00000533946 MPDU1O75352 247 aa6.69□□□□□ -1.34
SSBP3-215ENST00000533946 IGHV3-53P01767 116 aa6.69□□□□□ -1.34
SSBP3-215ENST00000533946 S100A7P31151 101 aa6.69□□□□□ -1.34
SSBP3-215ENST00000533946 GNG5P63218 68 aa6.69□□□□□ -1.34
SSBP3-215ENST00000533946 OR5I1Q13606 314 aa6.69□□□□□ -1.34
SSBP3-215ENST00000533946 GUK1Q16774 197 aa6.69□□□□□ -1.34
SSBP3-215ENST00000533946 MUC21Q5SSG8 566 aa6.69□□□□□ -1.34
SSBP3-215ENST00000533946 C9orf47Q6ZRZ4 202 aa6.69□□□□□ -1.34
SSBP3-215ENST00000533946 UBE2DNLQ8IWF7 75 aa6.69□□□□□ -1.34
SSBP3-215ENST00000533946 TMEM256Q8N2U0 113 aa6.69□□□□□ -1.34
SSBP3-215ENST00000533946 C16orf74Q96GX8 76 aa6.69□□□□□ -1.34
SSBP3-215ENST00000533946 VSIG2Q96IQ7 327 aa6.69□□□□□ -1.34
SSBP3-215ENST00000533946 SH3BGRL3Q9H299 93 aa6.69□□□□□ -1.34
SSBP3-215ENST00000533946 ZNF492Q9P255 531 aa6.69□□□□□ -1.34
SSBP3-215ENST00000533946 SMLR1H3BR10 107 aa6.68□□□□□ -1.34
SSBP3-215ENST00000533946 OR7C2O60412 319 aa6.68□□□□□ -1.34
SSBP3-215ENST00000533946 ATP5G1P05496 136 aa6.68□□□□□ -1.34
SSBP3-215ENST00000533946 LEPP41159 167 aa6.68□□□□□ -1.34
SSBP3-215ENST00000533946 ATP5G3P48201 142 aa6.68□□□□□ -1.34
SSBP3-215ENST00000533946 ESRGQ1W209 222 aa6.68□□□□□ -1.34
SSBP3-215ENST00000533946 ZNRF2Q8NHG8 242 aa6.68□□□□□ -1.34
SSBP3-215ENST00000533946 HYLS1Q96M11 299 aa6.68□□□□□ -1.34
SSBP3-215ENST00000533946 Q9H3A6 140 aa6.68□□□□□ -1.34
SSBP3-215ENST00000533946 MRPL16Q9NX20 251 aaKnown RBP6.68□□□□□ -1.34
SSBP3-215ENST00000533946 MDFICQ9P1T7 246 aa6.68□□□□□ -1.34
SSBP3-215ENST00000533946 PRSS29PA6NIE9 313 aa6.67□□□□□ -1.34
SSBP3-215ENST00000533946 CRISP2P16562 243 aa6.67□□□□□ -1.34
SSBP3-215ENST00000533946 DEFA1P59665 94 aa6.67□□□□□ -1.34
SSBP3-215ENST00000533946 DEFA3P59666 94 aa6.67□□□□□ -1.34
SSBP3-215ENST00000533946 UBE2L3P68036 154 aaKnown RBP6.67□□□□□ -1.34
SSBP3-215ENST00000533946 CYCSP99999 105 aaKnown RBP6.67□□□□□ -1.34
SSBP3-215ENST00000533946 TNP2Q05952 138 aa6.67□□□□□ -1.34
SSBP3-215ENST00000533946 S100A7AQ86SG5 101 aa6.67□□□□□ -1.34
SSBP3-215ENST00000533946 ZNF575Q86XF7 245 aa6.67□□□□□ -1.34
SSBP3-215ENST00000533946 HSD17B11Q8NBQ5 300 aa6.67□□□□□ -1.34
SSBP3-215ENST00000533946 MRPL53Q96EL3 112 aaKnown RBP6.67□□□□□ -1.34
SSBP3-215ENST00000533946 ODF3Q96PU9 254 aa6.67□□□□□ -1.34
SSBP3-215ENST00000533946 BATF3Q9NR55 127 aa6.67□□□□□ -1.34
SSBP3-215ENST00000533946 RPH3ALQ9UNE2 315 aa6.67□□□□□ -1.34
SSBP3-215ENST00000533946 RNF222A6NCQ9 220 aa6.66□□□□□ -1.34
SSBP3-215ENST00000533946 DIRC3C9JPN6 131 aa6.66□□□□□ -1.34
SSBP3-215ENST00000533946 SLC25A5P05141 298 aaKnown RBP6.66□□□□□ -1.34
SSBP3-215ENST00000533946 GPX1P07203 203 aa6.66□□□□□ -1.34
SSBP3-215ENST00000533946 FUSP35637 526 aaKnown RBP eCLIP6.66□□□□□ -1.342e-6■■■□□ 16.5
SSBP3-215ENST00000533946 ZNF138P52744 262 aa6.66□□□□□ -1.34
SSBP3-215ENST00000533946 PDE6HQ13956 83 aa6.66□□□□□ -1.34
SSBP3-215ENST00000533946 LGALS9BQ3B8N2 356 aa6.66□□□□□ -1.34
SSBP3-215ENST00000533946 ZNF493Q6ZR52 646 aa6.66□□□□□ -1.34
SSBP3-215ENST00000533946 FAM210BQ96KR6 192 aa6.66□□□□□ -1.34
SSBP3-215ENST00000533946 LINC00477Q96M19 166 aa6.66□□□□□ -1.34
SSBP3-215ENST00000533946 MRPL32Q9BYC8 188 aaKnown RBP6.66□□□□□ -1.34
SSBP3-215ENST00000533946 KRTAP4-5Q9BYR2 181 aa6.66□□□□□ -1.34
SSBP3-215ENST00000533946 C11orf21Q9P2W6 132 aa6.66□□□□□ -1.34
SSBP3-215ENST00000533946 TNFRSF18Q9Y5U5 241 aa6.66□□□□□ -1.34
SSBP3-215ENST00000533946 A0A096LPF7 62 aa6.65□□□□□ -1.34
SSBP3-215ENST00000533946 TRGV1A0A0A0MS02 117 aa6.65□□□□□ -1.34
SSBP3-215ENST00000533946 TEX48A0A1B0GUV7 120 aa6.65□□□□□ -1.34
SSBP3-215ENST00000533946 PGPA6NDG6 321 aa6.65□□□□□ -1.34
SSBP3-215ENST00000533946 F6UZH7 168 aa6.65□□□□□ -1.34
SSBP3-215ENST00000533946 GNRH2O43555 120 aa6.65□□□□□ -1.34
SSBP3-215ENST00000533946 SPINK4O60575 86 aa6.65□□□□□ -1.34
SSBP3-215ENST00000533946 SFTA3P0C7M3 94 aa6.65□□□□□ -1.34
SSBP3-215ENST00000533946 ATP6V0CP27449 155 aa6.65□□□□□ -1.34
SSBP3-215ENST00000533946 ZNF80P51504 273 aaPredicted RBP6.65□□□□□ -1.34
SSBP3-215ENST00000533946 DAZ2Q13117 558 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms