RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 POLR2GP62487 172 aaKnown RBP eCLIP6.51□□□□□ -1.37
CSDE1-215ENST00000533818 CACNG7P62955 275 aa6.51□□□□□ -1.37
CSDE1-215ENST00000533818 RHOHQ15669 191 aa6.51□□□□□ -1.37
CSDE1-215ENST00000533818 ACOT7LQ6ZUV0 252 aa6.51□□□□□ -1.37
CSDE1-215ENST00000533818 S100A7AQ86SG5 101 aa6.51□□□□□ -1.37
CSDE1-215ENST00000533818 OR52I2Q8NH67 350 aa6.51□□□□□ -1.37
CSDE1-215ENST00000533818 Q8TAT8 98 aa6.51□□□□□ -1.37
CSDE1-215ENST00000533818 FAM19A4Q96LR4 140 aa6.51□□□□□ -1.37
CSDE1-215ENST00000533818 LINC00477Q96M19 166 aa6.51□□□□□ -1.37
CSDE1-215ENST00000533818 RBKSQ9H477 322 aa6.51□□□□□ -1.37
CSDE1-215ENST00000533818 SCN3BQ9NY72 215 aa6.51□□□□□ -1.37
CSDE1-215ENST00000533818 COPZ2Q9P299 210 aa6.51□□□□□ -1.37
CSDE1-215ENST00000533818 PXMP4Q9Y6I8 212 aa6.51□□□□□ -1.37
CSDE1-215ENST00000533818 IGHV3-64A0A075B6Q5 118 aa6.5□□□□□ -1.37
CSDE1-215ENST00000533818 LCE2BO14633 110 aa6.5□□□□□ -1.37
CSDE1-215ENST00000533818 IL5P05113 134 aa6.5□□□□□ -1.37
CSDE1-215ENST00000533818 RAB11AP62491 216 aa6.5□□□□□ -1.37
CSDE1-215ENST00000533818 Q0VG73 95 aa6.5□□□□□ -1.37
CSDE1-215ENST00000533818 ELOBQ15370 118 aa6.5□□□□□ -1.37
CSDE1-215ENST00000533818 LYPD6BQ8NI32 183 aa6.5□□□□□ -1.37
CSDE1-215ENST00000533818 LHFPL5Q8TAF8 219 aa6.5□□□□□ -1.37
CSDE1-215ENST00000533818 C8orf4Q9NR00 106 aa6.5□□□□□ -1.37
CSDE1-215ENST00000533818 PAIP2BQ9ULR5 123 aaKnown RBP6.5□□□□□ -1.37
CSDE1-215ENST00000533818 RNF24Q9Y225 148 aa6.5□□□□□ -1.37
CSDE1-215ENST00000533818 TRBV6-4A0A1B0GX49 114 aa6.49□□□□□ -1.37
CSDE1-215ENST00000533818 FBLL1A6NHQ2 334 aaKnown RBP6.49□□□□□ -1.37
CSDE1-215ENST00000533818 B3GALNT1O75752 331 aa6.49□□□□□ -1.37
CSDE1-215ENST00000533818 HLA-DQA1P01909 254 aa6.49□□□□□ -1.37
CSDE1-215ENST00000533818 SULT1A3P0DMM9 295 aa6.49□□□□□ -1.37
CSDE1-215ENST00000533818 SULT1A4P0DMN0 295 aa6.49□□□□□ -1.37
CSDE1-215ENST00000533818 CRISP2P16562 243 aa6.49□□□□□ -1.37
CSDE1-215ENST00000533818 RAB31Q13636 194 aa6.49□□□□□ -1.37
CSDE1-215ENST00000533818 MUC21Q5SSG8 566 aa6.49□□□□□ -1.37
CSDE1-215ENST00000533818 PRR9Q5T870 116 aa6.49□□□□□ -1.37
CSDE1-215ENST00000533818 SELENOHQ8IZQ5 122 aaKnown RBP6.49□□□□□ -1.37
CSDE1-215ENST00000533818 PRR26Q8N8Z3 221 aa6.49□□□□□ -1.37
CSDE1-215ENST00000533818 CCDC71LQ8N9Z2 235 aa6.49□□□□□ -1.37
CSDE1-215ENST00000533818 OR10G9Q8NGN4 311 aa6.49□□□□□ -1.37
CSDE1-215ENST00000533818 AGPAT4-IT1Q9H0P7 198 aa6.49□□□□□ -1.37
CSDE1-215ENST00000533818 HSPB7Q9UBY9 170 aa6.49□□□□□ -1.37
CSDE1-215ENST00000533818 A0A087WWC5 75 aa6.48□□□□□ -1.37
CSDE1-215ENST00000533818 ANKRD65E5RJM6 399 aa6.48□□□□□ -1.37
CSDE1-215ENST00000533818 NMBP08949 121 aa6.48□□□□□ -1.37
CSDE1-215ENST00000533818 LINC00869P0C866 280 aa6.48□□□□□ -1.37
CSDE1-215ENST00000533818 PRSS3P35030 304 aa6.48□□□□□ -1.37
CSDE1-215ENST00000533818 CCR6P51684 374 aa6.48□□□□□ -1.37
CSDE1-215ENST00000533818 AKR1C1Q04828 323 aa6.48□□□□□ -1.37
CSDE1-215ENST00000533818 C4orf46Q504U0 113 aa6.48□□□□□ -1.37
CSDE1-215ENST00000533818 CYP2G1PQ6ZSU1 146 aa6.48□□□□□ -1.37
CSDE1-215ENST00000533818 ZFAND2AQ8N6M9 145 aa6.48□□□□□ -1.37
CSDE1-215ENST00000533818 GLYATL2Q8WU03 294 aa6.48□□□□□ -1.37
CSDE1-215ENST00000533818 CHAC2Q8WUX2 184 aa6.48□□□□□ -1.37
CSDE1-215ENST00000533818 SRRQ9GZT4 340 aa6.48□□□□□ -1.37
CSDE1-215ENST00000533818 NDUFB11Q9NX14 153 aa6.48□□□□□ -1.37
CSDE1-215ENST00000533818 A0A087WX48 190 aa6.47□□□□□ -1.37
CSDE1-215ENST00000533818 M0R2P5 195 aa6.47□□□□□ -1.37
CSDE1-215ENST00000533818 ZNF253O75346 499 aa6.47□□□□□ -1.37
CSDE1-215ENST00000533818 TNFAIP8O95379 198 aa6.47□□□□□ -1.37
CSDE1-215ENST00000533818 PLP1P60201 277 aa6.47□□□□□ -1.37
CSDE1-215ENST00000533818 BAK1Q16611 211 aa6.47□□□□□ -1.37
CSDE1-215ENST00000533818 TMEM183BQ1AE95 376 aa6.47□□□□□ -1.37
CSDE1-215ENST00000533818 TMEM268Q5VZI3 342 aa6.47□□□□□ -1.37
CSDE1-215ENST00000533818 BPIFA4PQ86YQ2 179 aa6.47□□□□□ -1.37
CSDE1-215ENST00000533818 TMEM183AQ8IXX5 376 aa6.47□□□□□ -1.37
CSDE1-215ENST00000533818 SAT2Q96F10 170 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-215ENST00000533818 S100A16Q96FQ6 103 aaKnown RBP6.47□□□□□ -1.37
CSDE1-215ENST00000533818 ARL6Q9H0F7 186 aa6.47□□□□□ -1.37
CSDE1-215ENST00000533818 IGHV3-73A0A0B4J1V6 119 aa6.46□□□□□ -1.38
CSDE1-215ENST00000533818 PGPA6NDG6 321 aa6.46□□□□□ -1.38
CSDE1-215ENST00000533818 H3BQ15 152 aa6.46□□□□□ -1.38
CSDE1-215ENST00000533818 VAMP1P23763 118 aa6.46□□□□□ -1.38
CSDE1-215ENST00000533818 UBE2MP61081 183 aaKnown RBP6.46□□□□□ -1.38
CSDE1-215ENST00000533818 CNBPP62633 177 aaKnown RBP6.46□□□□□ -1.38
CSDE1-215ENST00000533818 PATE2Q6UY27 113 aa6.46□□□□□ -1.38
CSDE1-215ENST00000533818 Q6ZRP5 223 aa6.46□□□□□ -1.38
CSDE1-215ENST00000533818 TMEM75Q8N9X5 138 aa6.46□□□□□ -1.38
CSDE1-215ENST00000533818 ZFAND1Q8TCF1 268 aa6.46□□□□□ -1.38
CSDE1-215ENST00000533818 S100A14Q9HCY8 104 aa6.46□□□□□ -1.38
CSDE1-215ENST00000533818 TRGV11A0A075B6L2 103 aa6.45□□□□□ -1.38
CSDE1-215ENST00000533818 MUC21A0A0G2JKD1 596 aa6.45□□□□□ -1.38
CSDE1-215ENST00000533818 C5orf51A6NDU8 294 aa6.45□□□□□ -1.38
CSDE1-215ENST00000533818 M0R3E3 92 aa6.45□□□□□ -1.38
CSDE1-215ENST00000533818 SMCPP49901 116 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-215ENST00000533818 MAJINQ3KP22 176 aa6.45□□□□□ -1.38
CSDE1-215ENST00000533818 KCNIP4Q6PIL6 250 aa6.45□□□□□ -1.38
CSDE1-215ENST00000533818 ENHOQ6UWT2 76 aa6.45□□□□□ -1.38
CSDE1-215ENST00000533818 CYB561D1Q8N8Q1 229 aa6.45□□□□□ -1.38
CSDE1-215ENST00000533818 CLRN3Q8NCR9 226 aa6.45□□□□□ -1.38
CSDE1-215ENST00000533818 ARV1Q9H2C2 271 aa6.45□□□□□ -1.38
CSDE1-215ENST00000533818 DUSP21Q9H596 190 aa6.45□□□□□ -1.38
CSDE1-215ENST00000533818 TXNL4BQ9NX01 149 aaKnown RBP6.45□□□□□ -1.38
CSDE1-215ENST00000533818 TPRKBQ9Y3C4 175 aa6.45□□□□□ -1.38
CSDE1-215ENST00000533818 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-215ENST00000533818 GAGE12JA6NER3 117 aa6.44□□□□□ -1.38
CSDE1-215ENST00000533818 IGLC2P0DOY2 106 aa6.44□□□□□ -1.38
CSDE1-215ENST00000533818 IAPPP10997 89 aa6.44□□□□□ -1.38
CSDE1-215ENST00000533818 SDC2P34741 201 aa6.44□□□□□ -1.38
CSDE1-215ENST00000533818 SELENOTP62341 195 aa6.44□□□□□ -1.38
CSDE1-215ENST00000533818 MXD1Q05195 221 aa6.44□□□□□ -1.38
CSDE1-215ENST00000533818 GAGE1Q13065 139 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms