RNA–Protein interactions for RNA: ENST00000533411.5

SOX6-215, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-215ENST00000533411 MGAM2Q2M2H8 2515 aa5.37□□□□□ -1.55
SOX6-215ENST00000533411 IGHV3-49A0A0A0MS15 119 aa5.36□□□□□ -1.55
SOX6-215ENST00000533411 TRAV8-1A0A0A6YYK1 113 aa5.36□□□□□ -1.55
SOX6-215ENST00000533411 IGHV3-66A0A0C4DH42 116 aa5.36□□□□□ -1.55
SOX6-215ENST00000533411 ZNF320A2RRD8 509 aa5.36□□□□□ -1.55
SOX6-215ENST00000533411 M0R3E3 92 aa5.36□□□□□ -1.55
SOX6-215ENST00000533411 CHEK1O14757 476 aa5.36□□□□□ -1.55
SOX6-215ENST00000533411 TRGC2P03986 189 aa5.36□□□□□ -1.55
SOX6-215ENST00000533411 DEFA6Q01524 100 aa5.36□□□□□ -1.55
SOX6-215ENST00000533411 ACTL10Q5JWF8 245 aa5.36□□□□□ -1.55
SOX6-215ENST00000533411 SAMD13Q5VXD3 122 aa5.36□□□□□ -1.55
SOX6-215ENST00000533411 WDR73Q6P4I2 378 aa5.36□□□□□ -1.55
SOX6-215ENST00000533411 C16orf54Q6UWD8 224 aa5.36□□□□□ -1.55
SOX6-215ENST00000533411 LCNL1Q6ZST4 164 aa5.36□□□□□ -1.55
SOX6-215ENST00000533411 OR4B1Q8NGF8 309 aa5.36□□□□□ -1.55
SOX6-215ENST00000533411 MYOZ3Q8TDC0 251 aa5.36□□□□□ -1.55
SOX6-215ENST00000533411 GLMPQ8WWB7 406 aa5.36□□□□□ -1.55
SOX6-215ENST00000533411 SGK494Q96LW2 274 aa5.36□□□□□ -1.55
SOX6-215ENST00000533411 SAV1Q9H4B6 383 aaPredicted RBP5.36□□□□□ -1.55
SOX6-215ENST00000533411 PSG8Q9UQ74 426 aa5.36□□□□□ -1.55
SOX6-215ENST00000533411 UFC1Q9Y3C8 167 aa5.36□□□□□ -1.55
SOX6-215ENST00000533411 VWFP04275 2813 aa5.35□□□□□ -1.55
SOX6-215ENST00000533411 IGHV3OR16-13A0A075B7E8 117 aa5.35□□□□□ -1.55
SOX6-215ENST00000533411 IGKV2-40A0A087WW87 121 aaPredicted RBP5.35□□□□□ -1.55
SOX6-215ENST00000533411 IGHV3-74A0A0B4J1X5 117 aa5.35□□□□□ -1.55
SOX6-215ENST00000533411 IGHV7-4-1A0A0J9YVY3 117 aa5.35□□□□□ -1.55
SOX6-215ENST00000533411 RBAKDNA6NC62 111 aa5.35□□□□□ -1.55
SOX6-215ENST00000533411 IGKV2D-40P01614 121 aaPredicted RBP5.35□□□□□ -1.55
SOX6-215ENST00000533411 IGLV2-11P01706 119 aa5.35□□□□□ -1.55
SOX6-215ENST00000533411 MT-ND6P03923 174 aa5.35□□□□□ -1.55
SOX6-215ENST00000533411 CD28P10747 220 aa5.35□□□□□ -1.55
SOX6-215ENST00000533411 TCL1AP56279 114 aa5.35□□□□□ -1.55
SOX6-215ENST00000533411 NSUN5P1Q3KNT7 163 aa5.35□□□□□ -1.55
SOX6-215ENST00000533411 UNQ9165/PRO28630Q6UXU0 137 aa5.35□□□□□ -1.55
SOX6-215ENST00000533411 C8orf86Q6ZUL3 223 aa5.35□□□□□ -1.55
SOX6-215ENST00000533411 RNF152Q8N8N0 203 aa5.35□□□□□ -1.55
SOX6-215ENST00000533411 TSKUQ8WUA8 353 aa5.35□□□□□ -1.55
SOX6-215ENST00000533411 MLST8Q9BVC4 326 aa5.35□□□□□ -1.55
SOX6-215ENST00000533411 SMAD5-AS1Q9Y6J3 95 aa5.35□□□□□ -1.55
SOX6-215ENST00000533411 MEGF8Q7Z7M0 2845 aa5.35□□□□□ -1.55
SOX6-215ENST00000533411 SMIM27A0A1W2PRY6 76 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 IZUMO1RA6ND01 250 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 A8MWL6 223 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 K7EMT4 169 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 HIST1H2BKO60814 126 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 APOHP02749 345 aaPredicted RBP5.34□□□□□ -1.55
SOX6-215ENST00000533411 HIST1H2BJP06899 126 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 HIST1H2BOP23527 126 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 HIST1H2BBP33778 126 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 HIST1H2BDP58876 126 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 HIST1H2BCP62807 126 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 HIST2H2BEQ16778 126 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 KHDC1LQ5JSQ8 128 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.34□□□□□ -1.55
SOX6-215ENST00000533411 SAPCD1Q5SSQ6 148 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 C10orf99Q6UWK7 81 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 ATP5L2Q7Z4Y8 100 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 GPHB5Q86YW7 130 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 ZNF738Q8NE65 137 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 NUDT10Q8NFP7 164 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 WIPF2Q8TF74 440 aaPredicted RBP5.34□□□□□ -1.55
SOX6-215ENST00000533411 FRZBQ92765 325 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 HIST1H2BHQ93079 126 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 NUDT11Q96G61 164 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 C16orf92Q96LL3 132 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 UBE2E2Q96LR5 201 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 HIST1H2BNQ99877 126 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 HIST1H2BMQ99879 126 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 NAT8BQ9UHF3 227 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 TRAPPC1Q9Y5R8 145 aa5.34□□□□□ -1.55
SOX6-215ENST00000533411 A0A1W2PRX2 142 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 XKRY2A2RUG3 117 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 C19orf71A6NCJ1 209 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 ADARB2-AS1A8MUL3 147 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 A8MWP6 167 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 SNURFLB1AK76 121 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 NPIPB6E9PJ23 425 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 UBE2CO00762 179 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 CA1P00915 261 aaPredicted RBP5.33□□□□□ -1.56
SOX6-215ENST00000533411 HLA-DQA1P01909 254 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 TRGC1P0CF51 173 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 CBLN1P23435 193 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 HLA-DMBP28068 263 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 AKR1D1P51857 326 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 NDUFA6P56556 154 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 SNRPEP62304 92 aaKnown RBP5.33□□□□□ -1.56
SOX6-215ENST00000533411 FABP9Q0Z7S8 132 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 FAM162BQ5T6X4 162 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 TMEM78Q5T7P6 136 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 Q6AWC8 147 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 LCN12Q6JVE5 192 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 MRPL54Q6P161 138 aaKnown RBP5.33□□□□□ -1.56
SOX6-215ENST00000533411 RASL11AQ6T310 242 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 RNF182Q8N6D2 247 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 OR2D3Q8NGH3 330 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 Q8TAT8 98 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 C4orf3Q8WVX3 66 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 ZC2HC1AQ96GY0 325 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 NEU1Q99519 415 aa5.33□□□□□ -1.56
SOX6-215ENST00000533411 CITED2Q99967 270 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms