RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 LGALS9O00182 355 aa16.59■□□□□ 0.25
AP004608.1-202ENST00000533390 HLA-DQA1P01909 254 aa16.59■□□□□ 0.25
AP004608.1-202ENST00000533390 CDX1P47902 265 aaPredicted RBP16.59■□□□□ 0.25
AP004608.1-202ENST00000533390 SMUG1Q53HV7 270 aa16.59■□□□□ 0.25
AP004608.1-202ENST00000533390 FAM162BQ5T6X4 162 aa16.59■□□□□ 0.25
AP004608.1-202ENST00000533390 TMEM78Q5T7P6 136 aa16.59■□□□□ 0.25
AP004608.1-202ENST00000533390 ATP5L2Q7Z4Y8 100 aa16.59■□□□□ 0.25
AP004608.1-202ENST00000533390 ZNF738Q8NE65 137 aa16.59■□□□□ 0.25
AP004608.1-202ENST00000533390 SONP18583 2426 aaKnown RBP16.59■□□□□ 0.25
AP004608.1-202ENST00000533390 XKRY2A2RUG3 117 aa16.59■□□□□ 0.25
AP004608.1-202ENST00000533390 A8MWP6 167 aa16.59■□□□□ 0.25
AP004608.1-202ENST00000533390 TMEM136Q6ZRR5 245 aa16.59■□□□□ 0.25
AP004608.1-202ENST00000533390 ZNF418Q8TF45 676 aaPredicted RBP16.59■□□□□ 0.25
AP004608.1-202ENST00000533390 TMEM213A2RRL7 107 aa16.58■□□□□ 0.24
AP004608.1-202ENST00000533390 SOCS3O14543 225 aa16.58■□□□□ 0.24
AP004608.1-202ENST00000533390 SRD5A1P18405 259 aa16.58■□□□□ 0.24
AP004608.1-202ENST00000533390 HOXD3P31249 432 aaPredicted RBP16.58■□□□□ 0.24
AP004608.1-202ENST00000533390 SYNJ2BPP57105 145 aa16.58■□□□□ 0.24
AP004608.1-202ENST00000533390 RBPMS2Q6ZRY4 209 aaKnown RBP16.58■□□□□ 0.24
AP004608.1-202ENST00000533390 WIPF2Q8TF74 440 aaPredicted RBP16.58■□□□□ 0.24
AP004608.1-202ENST00000533390 GTSF1Q8WW33 167 aa16.58■□□□□ 0.24
AP004608.1-202ENST00000533390 IGKV3-7A0A075B6H7 116 aa16.57■□□□□ 0.24
AP004608.1-202ENST00000533390 SH2D1AO60880 128 aa16.57■□□□□ 0.24
AP004608.1-202ENST00000533390 KHDC1LQ5JSQ8 128 aa16.57■□□□□ 0.24
AP004608.1-202ENST00000533390 GPR61Q9BZJ8 451 aa16.57■□□□□ 0.24
AP004608.1-202ENST00000533390 AGPAT4-IT1Q9H0P7 198 aa16.57■□□□□ 0.24
AP004608.1-202ENST00000533390 EDN2P20800 178 aa16.56■□□□□ 0.24
AP004608.1-202ENST00000533390 ZNF138P52744 262 aa16.56■□□□□ 0.24
AP004608.1-202ENST00000533390 C9orf47Q6ZRZ4 202 aa16.56■□□□□ 0.24
AP004608.1-202ENST00000533390 PGLYRP4Q96LB8 373 aa16.56■□□□□ 0.24
AP004608.1-202ENST00000533390 FASNP49327 2511 aaKnown RBP16.56■□□□□ 0.24
AP004608.1-202ENST00000533390 RNASE1P07998 156 aaKnown RBP16.56■□□□□ 0.24
AP004608.1-202ENST00000533390 SAMD13Q5VXD3 122 aa16.56■□□□□ 0.24
AP004608.1-202ENST00000533390 C4orf3Q8WVX3 66 aa16.56■□□□□ 0.24
AP004608.1-202ENST00000533390 C20orf173Q96LM9 149 aa16.56■□□□□ 0.24
AP004608.1-202ENST00000533390 TMEM189A5PLL7 270 aa16.55■□□□□ 0.24
AP004608.1-202ENST00000533390 OVOL1O14753 267 aa16.55■□□□□ 0.24
AP004608.1-202ENST00000533390 GZMBP10144 247 aa16.55■□□□□ 0.24
AP004608.1-202ENST00000533390 SMR3AQ99954 134 aa16.55■□□□□ 0.24
AP004608.1-202ENST00000533390 S100A8P05109 93 aa16.54■□□□□ 0.24
AP004608.1-202ENST00000533390 ID1P41134 155 aa16.54■□□□□ 0.24
AP004608.1-202ENST00000533390 LINC01619G3V211 115 aa16.54■□□□□ 0.24
AP004608.1-202ENST00000533390 S100A2P29034 98 aa16.54■□□□□ 0.24
AP004608.1-202ENST00000533390 FOXA3P55318 350 aaPredicted RBP16.54■□□□□ 0.24
AP004608.1-202ENST00000533390 HBBP68871 147 aa16.54■□□□□ 0.24
AP004608.1-202ENST00000533390 COA6Q5JTJ3 125 aaKnown RBP16.54■□□□□ 0.24
AP004608.1-202ENST00000533390 GFI1BQ5VTD9 330 aa16.54■□□□□ 0.24
AP004608.1-202ENST00000533390 C18orf65Q6ZTR6 163 aa16.54■□□□□ 0.24
AP004608.1-202ENST00000533390 HIST3H2BBQ8N257 126 aa16.54■□□□□ 0.24
AP004608.1-202ENST00000533390 DPF1Q92782 380 aa16.54■□□□□ 0.24
AP004608.1-202ENST00000533390 PPP1R14DQ9NXH3 145 aa16.54■□□□□ 0.24
AP004608.1-202ENST00000533390 ACANP16112 2415 aa16.53■□□□□ 0.24
AP004608.1-202ENST00000533390 FABP5P3A8MUU1 101 aa16.53■□□□□ 0.24
AP004608.1-202ENST00000533390 CAMPP49913 170 aa16.53■□□□□ 0.24
AP004608.1-202ENST00000533390 TCTEX1D4Q5JR98 221 aa16.53■□□□□ 0.24
AP004608.1-202ENST00000533390 OR10J6PQ8NGY7 276 aa16.53■□□□□ 0.24
AP004608.1-202ENST00000533390 SELENOKQ9Y6D0 94 aa16.53■□□□□ 0.24
AP004608.1-202ENST00000533390 A0A1B0GXF2 115 aa16.52■□□□□ 0.24
AP004608.1-202ENST00000533390 M0QZ24 198 aa16.52■□□□□ 0.24
AP004608.1-202ENST00000533390 LY6G6DO95868 133 aa16.52■□□□□ 0.24
AP004608.1-202ENST00000533390 ZNF80P51504 273 aaPredicted RBP16.52■□□□□ 0.24
AP004608.1-202ENST00000533390 DEFB136Q30KP8 78 aa16.52■□□□□ 0.24
AP004608.1-202ENST00000533390 PDZD11Q5EBL8 140 aa16.52■□□□□ 0.24
AP004608.1-202ENST00000533390 Q6AWC8 147 aa16.52■□□□□ 0.24
AP004608.1-202ENST00000533390 HECTD1Q9ULT8 2610 aa16.52■□□□□ 0.23
AP004608.1-202ENST00000533390 APCSP02743 223 aa16.52■□□□□ 0.23
AP004608.1-202ENST00000533390 RPS20P60866 119 aaKnown RBP16.52■□□□□ 0.23
AP004608.1-202ENST00000533390 KLF5Q13887 457 aaPredicted RBP16.52■□□□□ 0.23
AP004608.1-202ENST00000533390 KLHL30-AS1Q8NEE0 82 aa16.52■□□□□ 0.23
AP004608.1-202ENST00000533390 OR11H1Q8NG94 326 aa16.52■□□□□ 0.23
AP004608.1-202ENST00000533390 LINC00477Q96M19 166 aa16.52■□□□□ 0.23
AP004608.1-202ENST00000533390 CRISP2P16562 243 aa16.51■□□□□ 0.23
AP004608.1-202ENST00000533390 SLURP1P55000 103 aa16.51■□□□□ 0.23
AP004608.1-202ENST00000533390 HILS1P60008 231 aa16.51■□□□□ 0.23
AP004608.1-202ENST00000533390 LENEPQ9Y5L5 61 aa16.51■□□□□ 0.23
AP004608.1-202ENST00000533390 AKAP9Q99996 3911 aa16.51■□□□□ 0.23
AP004608.1-202ENST00000533390 C2orf70A6NJV1 201 aa16.5■□□□□ 0.23
AP004608.1-202ENST00000533390 OR1N2Q8NGR9 330 aa16.5■□□□□ 0.23
AP004608.1-202ENST00000533390 WFDC12Q8WWY7 111 aa16.5■□□□□ 0.23
AP004608.1-202ENST00000533390 BORCS7Q96B45 105 aa16.5■□□□□ 0.23
AP004608.1-202ENST00000533390 TMSB15BA0A087X1C1 80 aa16.5■□□□□ 0.23
AP004608.1-202ENST00000533390 SRSF2Q01130 221 aaKnown RBP16.5■□□□□ 0.23
AP004608.1-202ENST00000533390 WFDC3Q8IUB2 231 aa16.5■□□□□ 0.23
AP004608.1-202ENST00000533390 DCANP1Q8TF63 244 aa16.5■□□□□ 0.23
AP004608.1-202ENST00000533390 C16orf95Q9H693 158 aa16.5■□□□□ 0.23
AP004608.1-202ENST00000533390 A0A1B0GUT8 65 aa16.49■□□□□ 0.23
AP004608.1-202ENST00000533390 GRIFINA4D1Z8 144 aa16.49■□□□□ 0.23
AP004608.1-202ENST00000533390 ZNF705DP0CH99 300 aaPredicted RBP16.49■□□□□ 0.23
AP004608.1-202ENST00000533390 ZNF705BP0CI00 300 aaPredicted RBP16.49■□□□□ 0.23
AP004608.1-202ENST00000533390 JMJD8Q96S16 334 aa16.49■□□□□ 0.23
AP004608.1-202ENST00000533390 MYO9AB2RTY4 2548 aa16.49■□□□□ 0.23
AP004608.1-202ENST00000533390 IFITM10A6NMD0 228 aa16.48■□□□□ 0.23
AP004608.1-202ENST00000533390 HAX1O00165 279 aa16.48■□□□□ 0.23
AP004608.1-202ENST00000533390 ORM1P02763 201 aa16.48■□□□□ 0.23
AP004608.1-202ENST00000533390 RIGQ13278 110 aa16.48■□□□□ 0.23
AP004608.1-202ENST00000533390 KIAA1644Q3SXP7 199 aa16.48■□□□□ 0.23
AP004608.1-202ENST00000533390 MS4A6AQ9H2W1 248 aa16.48■□□□□ 0.23
AP004608.1-202ENST00000533390 PEMTQ9UBM1 199 aa16.48■□□□□ 0.23
AP004608.1-202ENST00000533390 HIST1H1AQ02539 215 aaPredicted RBP16.48■□□□□ 0.23
AP004608.1-202ENST00000533390 SLAQ13239 276 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms