RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 IGLV2-11P01706 119 aa6.27□□□□□ -1.41
NEDD8-207ENST00000533242 TCRAP04437 139 aa6.27□□□□□ -1.41
NEDD8-207ENST00000533242 TOMM20LQ6UXN7 152 aa6.27□□□□□ -1.41
NEDD8-207ENST00000533242 FAM231DQ6ZW35 169 aa6.27□□□□□ -1.41
NEDD8-207ENST00000533242 FAM19A2Q8N3H0 131 aa6.27□□□□□ -1.41
NEDD8-207ENST00000533242 GTSF1Q8WW33 167 aa6.27□□□□□ -1.41
NEDD8-207ENST00000533242 NDUFAF3Q9BU61 184 aa6.27□□□□□ -1.41
NEDD8-207ENST00000533242 SLC25A39Q9BZJ4 359 aaPredicted RBP6.27□□□□□ -1.41
NEDD8-207ENST00000533242 STAB2Q8WWQ8 2551 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 KIR2DL5BA0A0G2JN68 375 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 KIR2DL5BA0A0G2JPC4 375 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 ZNF253O75346 499 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 GPX1P07203 203 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 TPPP2P59282 170 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 KIR2DL5AQ8N109 375 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 LINC00469Q8N7U9 141 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 ATG101Q9BSB4 218 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 MRPL27Q9P0M9 148 aaKnown RBP6.26□□□□□ -1.41
NEDD8-207ENST00000533242 HIGD1AQ9Y241 93 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 EPPK1P58107 5090 aaKnown RBP6.26□□□□□ -1.41
NEDD8-207ENST00000533242 ZNF705FA8MVS1 300 aaPredicted RBP6.26□□□□□ -1.41
NEDD8-207ENST00000533242 F8W735 103 aaPredicted RBP6.26□□□□□ -1.41
NEDD8-207ENST00000533242 NBR2O15453 112 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 LTAP01374 205 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 IGHG4P01861 327 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 MT-ND6P03923 174 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 ZNF705DP0CH99 300 aaPredicted RBP6.26□□□□□ -1.41
NEDD8-207ENST00000533242 ZNF705BP0CI00 300 aaPredicted RBP6.26□□□□□ -1.41
NEDD8-207ENST00000533242 PMCHP20382 165 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 CAMPP49913 170 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 UBE2G1P62253 170 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 CFHR3Q02985 330 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 C1orf194Q5T5A4 169 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 WDR73Q6P4I2 378 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 Q8N6K4 173 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 C18orf32Q8TCD1 76 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 VN1R17PQ8TDU5 208 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 GPR82Q96P67 336 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 FANCD2OSQ96PS1 177 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 RASL11BQ9BPW5 248 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 SAMD10Q9BYL1 202 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 ZNF580Q9UK33 172 aa6.26□□□□□ -1.41
NEDD8-207ENST00000533242 C19orf71A6NCJ1 209 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 NDUFA3O95167 84 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 HLA-DQA1P01909 254 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 APCSP02743 223 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 PAFAH1B2P68402 229 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 NIT1Q86X76 327 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 ZNF491Q8N8L2 437 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 Q8N9W7 124 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 C5orf17Q8NAS9 161 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 STXBP6Q8NFX7 210 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 MYOZ3Q8TDC0 251 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 TSKUQ8WUA8 353 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 GRAMD2BQ96HH9 432 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 TMEM68Q96MH6 324 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 DNAH7Q8WXX0 4024 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 A0A1B0GXF2 115 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 TOMM40O96008 361 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 IGHV3-23P01764 117 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 AMTP48728 403 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 USF2Q15853 346 aaPredicted RBP6.25□□□□□ -1.41
NEDD8-207ENST00000533242 LINC01559Q495D7 138 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 TEX43Q6ZNM6 134 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 GOLT1AQ6ZVE7 132 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 OR11H1Q8NG94 326 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 TM2D3Q9BRN9 247 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 SNHG12Q9BXW3 62 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 KRTAP17-1Q9BYP8 105 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 NRN1Q9NPD7 142 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 PAM16Q9Y3D7 125 aa6.25□□□□□ -1.41
NEDD8-207ENST00000533242 NCBP2LA6PVI3 153 aaKnown RBP6.24□□□□□ -1.41
NEDD8-207ENST00000533242 M0R3E3 92 aa6.24□□□□□ -1.41
NEDD8-207ENST00000533242 MRPS12O15235 138 aaKnown RBP6.24□□□□□ -1.41
NEDD8-207ENST00000533242 PSMB8P28062 276 aa6.24□□□□□ -1.41
NEDD8-207ENST00000533242 KRTDAPP60985 99 aa6.24□□□□□ -1.41
NEDD8-207ENST00000533242 C5orf64Q2M2E5 130 aa6.24□□□□□ -1.41
NEDD8-207ENST00000533242 OR10J3Q5JRS4 329 aa6.24□□□□□ -1.41
NEDD8-207ENST00000533242 Q86TA4 180 aa6.24□□□□□ -1.41
NEDD8-207ENST00000533242 NPBQ8NG41 125 aa6.24□□□□□ -1.41
NEDD8-207ENST00000533242 OR1N2Q8NGR9 330 aa6.24□□□□□ -1.41
NEDD8-207ENST00000533242 URB1-AS1Q96HZ7 61 aa6.24□□□□□ -1.41
NEDD8-207ENST00000533242 KCNS1Q96KK3 526 aa6.24□□□□□ -1.41
NEDD8-207ENST00000533242 EDA2RQ9HAV5 297 aa6.24□□□□□ -1.41
NEDD8-207ENST00000533242 ZNF331Q9NQX6 463 aaPredicted RBP6.24□□□□□ -1.41
NEDD8-207ENST00000533242 DNAH1Q9P2D7 4330 aa6.24□□□□□ -1.41
NEDD8-207ENST00000533242 SACSQ9NZJ4 4579 aa6.24□□□□□ -1.41
NEDD8-207ENST00000533242 IGHV3OR16-8A0A075B7F1 116 aa6.24□□□□□ -1.41
NEDD8-207ENST00000533242 H3BRN7 92 aa6.24□□□□□ -1.41
NEDD8-207ENST00000533242 ZNF324O75467 553 aaPredicted RBP6.24□□□□□ -1.41
NEDD8-207ENST00000533242 IL4P05112 153 aa6.24□□□□□ -1.41
NEDD8-207ENST00000533242 IGLC2P0DOY2 106 aa6.24□□□□□ -1.41
NEDD8-207ENST00000533242 HIST1H1EP10412 219 aaKnown RBP6.24□□□□□ -1.41
NEDD8-207ENST00000533242 RPL19P84098 196 aaKnown RBP6.24□□□□□ -1.41
NEDD8-207ENST00000533242 SIGLEC15Q6ZMC9 328 aa6.24□□□□□ -1.41
NEDD8-207ENST00000533242 ADAMTSL5Q6ZMM2 481 aa6.24□□□□□ -1.41
NEDD8-207ENST00000533242 OR2D3Q8NGH3 330 aa6.24□□□□□ -1.41
NEDD8-207ENST00000533242 PGLYRP4Q96LB8 373 aa6.24□□□□□ -1.41
NEDD8-207ENST00000533242 RNF5Q99942 180 aa6.24□□□□□ -1.41
NEDD8-207ENST00000533242 SHANK2-AS3Q9BTD1 123 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms