RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 SOHLH1Q5JUK2 328 aa10.44□□□□□ -0.74
HIF3A-215ENST00000533145 GDF5OSQ5U4N7 250 aa10.44□□□□□ -0.74
HIF3A-215ENST00000533145 GTSCR1Q86UQ5 136 aa10.44□□□□□ -0.74
HIF3A-215ENST00000533145 Q8N1Y9 231 aa10.44□□□□□ -0.74
HIF3A-215ENST00000533145 DERL1Q9BUN8 251 aa10.44□□□□□ -0.74
HIF3A-215ENST00000533145 ZNF492Q9P255 531 aa10.44□□□□□ -0.74
HIF3A-215ENST00000533145 PSG8Q9UQ74 426 aa10.44□□□□□ -0.74
HIF3A-215ENST00000533145 HLA-DRB4X5D2U9 266 aa10.44□□□□□ -0.74
HIF3A-215ENST00000533145 TRAV34A0A0B4J273 112 aa10.43□□□□□ -0.74
HIF3A-215ENST00000533145 H3BMM0 161 aa10.43□□□□□ -0.74
HIF3A-215ENST00000533145 DEFB1P60022 68 aa10.43□□□□□ -0.74
HIF3A-215ENST00000533145 UBE2G1P62253 170 aa10.43□□□□□ -0.74
HIF3A-215ENST00000533145 ERCC8Q13216 396 aa10.43□□□□□ -0.74
HIF3A-215ENST00000533145 C10orf91Q5T1B1 145 aa10.43□□□□□ -0.74
HIF3A-215ENST00000533145 TMEM78Q5T7P6 136 aa10.43□□□□□ -0.74
HIF3A-215ENST00000533145 COX8CQ7Z4L0 72 aa10.43□□□□□ -0.74
HIF3A-215ENST00000533145 APRG1Q8IVJ8 170 aa10.43□□□□□ -0.74
HIF3A-215ENST00000533145 SMIM12Q96EX1 92 aa10.43□□□□□ -0.74
HIF3A-215ENST00000533145 ODF3Q96PU9 254 aa10.43□□□□□ -0.74
HIF3A-215ENST00000533145 CITED4Q96RK1 184 aa10.43□□□□□ -0.74
HIF3A-215ENST00000533145 SEC11CQ9BY50 192 aa10.43□□□□□ -0.74
HIF3A-215ENST00000533145 ZFP30Q9Y2G7 519 aa10.43□□□□□ -0.74
HIF3A-215ENST00000533145 LY96Q9Y6Y9 160 aa10.43□□□□□ -0.74
HIF3A-215ENST00000533145 TRAV8-1A0A0A6YYK1 113 aa10.42□□□□□ -0.74
HIF3A-215ENST00000533145 ZNF727A8MUV8 499 aa10.42□□□□□ -0.74
HIF3A-215ENST00000533145 G3V4G9 280 aa10.42□□□□□ -0.74
HIF3A-215ENST00000533145 LTAP01374 205 aa10.42□□□□□ -0.74
HIF3A-215ENST00000533145 ZNF705DP0CH99 300 aaPredicted RBP10.42□□□□□ -0.74
HIF3A-215ENST00000533145 ZNF705BP0CI00 300 aaPredicted RBP10.42□□□□□ -0.74
HIF3A-215ENST00000533145 ZNF138P52744 262 aa10.42□□□□□ -0.74
HIF3A-215ENST00000533145 KRTAP10-11P60412 298 aa10.42□□□□□ -0.74
HIF3A-215ENST00000533145 HIST1H1AQ02539 215 aaPredicted RBP10.42□□□□□ -0.74
HIF3A-215ENST00000533145 SAPCD1Q5SSQ6 148 aa10.42□□□□□ -0.74
HIF3A-215ENST00000533145 FAM19A4Q96LR4 140 aa10.42□□□□□ -0.74
HIF3A-215ENST00000533145 IGF2BP2-AS1Q96M15 143 aa10.42□□□□□ -0.74
HIF3A-215ENST00000533145 SMIM7Q9BQ49 75 aa10.42□□□□□ -0.74
HIF3A-215ENST00000533145 MLST8Q9BVC4 326 aa10.42□□□□□ -0.74
HIF3A-215ENST00000533145 CMYA5Q8N3K9 4069 aa10.41□□□□□ -0.74
HIF3A-215ENST00000533145 TRBV20OR9-2A0A075B6H5 130 aa10.41□□□□□ -0.74
HIF3A-215ENST00000533145 KNCNA6PVL3 124 aa10.41□□□□□ -0.74
HIF3A-215ENST00000533145 KRBOX1C9JBD0 128 aa10.41□□□□□ -0.74
HIF3A-215ENST00000533145 CT45A10P0DMU9 189 aa10.41□□□□□ -0.74
HIF3A-215ENST00000533145 PRB4P10163 310 aaPredicted RBP10.41□□□□□ -0.74
HIF3A-215ENST00000533145 CEBPGP53567 150 aa10.41□□□□□ -0.74
HIF3A-215ENST00000533145 ZNF124Q15973 351 aa10.41□□□□□ -0.74
HIF3A-215ENST00000533145 ACTL10Q5JWF8 245 aa10.41□□□□□ -0.74
HIF3A-215ENST00000533145 KPRPQ5T749 579 aaPredicted RBP10.41□□□□□ -0.74
HIF3A-215ENST00000533145 AMTNQ6UX39 209 aa10.41□□□□□ -0.74
HIF3A-215ENST00000533145 Q86TA4 180 aa10.41□□□□□ -0.74
HIF3A-215ENST00000533145 BAGE2Q86Y30 109 aa10.41□□□□□ -0.74
HIF3A-215ENST00000533145 SGK494Q96LW2 274 aa10.41□□□□□ -0.74
HIF3A-215ENST00000533145 PRR25Q96S07 402 aa10.41□□□□□ -0.74
HIF3A-215ENST00000533145 IGLV2-8P01709 118 aa10.4□□□□□ -0.74
HIF3A-215ENST00000533145 CRISP2P16562 243 aa10.4□□□□□ -0.74
HIF3A-215ENST00000533145 ADCYAP1P18509 176 aa10.4□□□□□ -0.74
HIF3A-215ENST00000533145 GNG4P50150 75 aa10.4□□□□□ -0.74
HIF3A-215ENST00000533145 TMEM241Q24JQ0 296 aa10.4□□□□□ -0.74
HIF3A-215ENST00000533145 ZNF674Q2M3X9 581 aa10.4□□□□□ -0.74
HIF3A-215ENST00000533145 PRNTQ86SH4 94 aa10.4□□□□□ -0.74
HIF3A-215ENST00000533145 TRPT1Q86TN4 253 aaKnown RBP10.4□□□□□ -0.74
HIF3A-215ENST00000533145 STHQ8IWL8 128 aa10.4□□□□□ -0.74
HIF3A-215ENST00000533145 TMEM183AQ8IXX5 376 aa10.4□□□□□ -0.74
HIF3A-215ENST00000533145 TVP23CQ96ET8 276 aa10.4□□□□□ -0.74
HIF3A-215ENST00000533145 SDF2L1Q9HCN8 221 aa10.4□□□□□ -0.74
HIF3A-215ENST00000533145 NAT8Q9UHE5 227 aa10.4□□□□□ -0.74
HIF3A-215ENST00000533145 F8W036 122 aa10.39□□□□□ -0.75
HIF3A-215ENST00000533145 CENPWQ5EE01 88 aa10.39□□□□□ -0.75
HIF3A-215ENST00000533145 DEFB125Q8N687 156 aa10.39□□□□□ -0.75
HIF3A-215ENST00000533145 OR4B1Q8NGF8 309 aa10.39□□□□□ -0.75
HIF3A-215ENST00000533145 NDFIP1Q9BT67 221 aa10.39□□□□□ -0.75
HIF3A-215ENST00000533145 CARHSP1Q9Y2V2 147 aaKnown RBP10.39□□□□□ -0.75
HIF3A-215ENST00000533145 A8MZ25 164 aa10.38□□□□□ -0.75
HIF3A-215ENST00000533145 ZFAND2AQ8N6M9 145 aa10.38□□□□□ -0.75
HIF3A-215ENST00000533145 OCC1Q8TAD7 63 aa10.38□□□□□ -0.75
HIF3A-215ENST00000533145 Q8TAT8 98 aa10.38□□□□□ -0.75
HIF3A-215ENST00000533145 NIPSNAP3BQ9BS92 247 aa10.38□□□□□ -0.75
HIF3A-215ENST00000533145 WFDC10AQ9H1F0 79 aa10.38□□□□□ -0.75
HIF3A-215ENST00000533145 PKD1L1Q8TDX9 2849 aa10.38□□□□□ -0.75
HIF3A-215ENST00000533145 RBMY1BA6NDE4 496 aaKnown RBP10.37□□□□□ -0.75
HIF3A-215ENST00000533145 RBMY1EA6NEQ0 496 aaKnown RBP10.37□□□□□ -0.75
HIF3A-215ENST00000533145 KLLNB2CW77 178 aa10.37□□□□□ -0.75
HIF3A-215ENST00000533145 RBMY1DP0C7P1 496 aaKnown RBP10.37□□□□□ -0.75
HIF3A-215ENST00000533145 TSPOP30536 169 aa10.37□□□□□ -0.75
HIF3A-215ENST00000533145 LEPP41159 167 aa10.37□□□□□ -0.75
HIF3A-215ENST00000533145 PNRC1Q12796 327 aaPredicted RBP10.37□□□□□ -0.75
HIF3A-215ENST00000533145 LINC01551Q86U37 167 aa10.37□□□□□ -0.75
HIF3A-215ENST00000533145 BIN3Q9NQY0 253 aa10.37□□□□□ -0.75
HIF3A-215ENST00000533145 GCGP01275 180 aa10.36□□□□□ -0.75
HIF3A-215ENST00000533145 AMBPP02760 352 aa10.36□□□□□ -0.75
HIF3A-215ENST00000533145 CDKN1BP46527 198 aa10.36□□□□□ -0.75
HIF3A-215ENST00000533145 RPL23P62829 140 aaKnown RBP10.36□□□□□ -0.75
HIF3A-215ENST00000533145 SMUG1Q53HV7 270 aa10.36□□□□□ -0.75
HIF3A-215ENST00000533145 MORN3Q6PF18 240 aaPredicted RBP10.36□□□□□ -0.75
HIF3A-215ENST00000533145 C8orf49Q96NF6 230 aa10.36□□□□□ -0.75
HIF3A-215ENST00000533145 PGPEP1LA6NFU8 196 aa10.35□□□□□ -0.75
HIF3A-215ENST00000533145 K7EN84 100 aa10.35□□□□□ -0.75
HIF3A-215ENST00000533145 IGKV3-20P01619 116 aa10.35□□□□□ -0.75
HIF3A-215ENST00000533145 NUTF2P61970 127 aaKnown RBP10.35□□□□□ -0.75
HIF3A-215ENST00000533145 LINC00322Q6ZN03 302 aaPredicted RBP10.35□□□□□ -0.75
HIF3A-215ENST00000533145 ASCL2Q99929 193 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms