RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 NOP10Q9NPE3 64 aaKnown RBP21.39■■□□□ 1.01
SSSCA1-207ENST00000533115 IGKV2-40A0A087WW87 121 aaPredicted RBP21.38■■□□□ 1.01
SSSCA1-207ENST00000533115 IGKV2D-40P01614 121 aaPredicted RBP21.38■■□□□ 1.01
SSSCA1-207ENST00000533115 KHDC3LQ587J8 217 aa21.38■■□□□ 1.01
SSSCA1-207ENST00000533115 C7orf71A4D174 169 aa21.37■■□□□ 1.01
SSSCA1-207ENST00000533115 CBY3A6NI87 242 aa21.37■■□□□ 1.01
SSSCA1-207ENST00000533115 KLLNB2CW77 178 aa21.37■■□□□ 1.01
SSSCA1-207ENST00000533115 TAS2R45P59539 299 aa21.37■■□□□ 1.01
SSSCA1-207ENST00000533115 UBE2L3P68036 154 aaKnown RBP21.37■■□□□ 1.01
SSSCA1-207ENST00000533115 PYGO2Q9BRQ0 406 aa21.37■■□□□ 1.01
SSSCA1-207ENST00000533115 TMEM78Q5T7P6 136 aa21.36■■□□□ 1.01
SSSCA1-207ENST00000533115 LYPD1Q8N2G4 141 aa21.36■■□□□ 1.01
SSSCA1-207ENST00000533115 VGLL1Q99990 258 aa21.36■■□□□ 1.01
SSSCA1-207ENST00000533115 ATP5G1P05496 136 aa21.35■■□□□ 1.01
SSSCA1-207ENST00000533115 CRISP2P16562 243 aa21.35■■□□□ 1.01
SSSCA1-207ENST00000533115 ATP5G3P48201 142 aa21.35■■□□□ 1.01
SSSCA1-207ENST00000533115 RANP62826 216 aaKnown RBP21.35■■□□□ 1.01
SSSCA1-207ENST00000533115 ACOT6Q3I5F7 207 aaPredicted RBP21.35■■□□□ 1.01
SSSCA1-207ENST00000533115 F5H768 121 aa21.34■■□□□ 1.01
SSSCA1-207ENST00000533115 M6PRP20645 277 aa21.34■■□□□ 1.01
SSSCA1-207ENST00000533115 AQP10Q96PS8 301 aa21.34■■□□□ 1.01
SSSCA1-207ENST00000533115 NMBP08949 121 aa21.33■■□□□ 1.01
SSSCA1-207ENST00000533115 CD300CQ08708 224 aa21.33■■□□□ 1.01
SSSCA1-207ENST00000533115 BTN1A1Q13410 526 aa21.33■■□□□ 1.01
SSSCA1-207ENST00000533115 C15orf53Q8NAA6 179 aa21.33■■□□□ 1.01
SSSCA1-207ENST00000533115 Q9H3A6 140 aa21.33■■□□□ 1.01
SSSCA1-207ENST00000533115 ZNF492Q9P255 531 aa21.33■■□□□ 1.01
SSSCA1-207ENST00000533115 SNURFLB1AK76 121 aa21.32■■□□□ 1
SSSCA1-207ENST00000533115 ZNF324O75467 553 aaPredicted RBP21.32■■□□□ 1
SSSCA1-207ENST00000533115 EIF3GO75821 320 aaKnown RBP eCLIP21.32■■□□□ 1
SSSCA1-207ENST00000533115 GPX1P07203 203 aa21.32■■□□□ 1
SSSCA1-207ENST00000533115 GIPP09681 153 aaPredicted RBP21.32■■□□□ 1
SSSCA1-207ENST00000533115 RNASE4P34096 147 aaKnown RBP21.32■■□□□ 1
SSSCA1-207ENST00000533115 CSN1S1P47710 185 aa21.32■■□□□ 1
SSSCA1-207ENST00000533115 ZNF266Q14584 549 aa21.32■■□□□ 1
SSSCA1-207ENST00000533115 UBE2DNLQ8IWF7 75 aa21.32■■□□□ 1
SSSCA1-207ENST00000533115 ASB13Q8WXK3 278 aa21.32■■□□□ 1
SSSCA1-207ENST00000533115 RAB2AP61019 212 aa21.31■■□□□ 1
SSSCA1-207ENST00000533115 Q5BKY6 102 aa21.31■■□□□ 1
SSSCA1-207ENST00000533115 A0A1W2PPV4 95 aa21.3■■□□□ 1
SSSCA1-207ENST00000533115 ZFAND2AQ8N6M9 145 aa21.3■■□□□ 1
SSSCA1-207ENST00000533115 LINC00612Q8N6U2 182 aa21.3■■□□□ 1
SSSCA1-207ENST00000533115 LINC00467Q9BRT7 94 aa21.3■■□□□ 1
SSSCA1-207ENST00000533115 RBAKDNA6NC62 111 aa21.29■■□□□ 1
SSSCA1-207ENST00000533115 ZNF138P52744 262 aa21.29■■□□□ 1
SSSCA1-207ENST00000533115 RNF212Q495C1 297 aa21.29■■□□□ 1
SSSCA1-207ENST00000533115 RGS21Q2M5E4 152 aa21.28■■□□□ 1
SSSCA1-207ENST00000533115 PRR9Q5T870 116 aa21.28■■□□□ 1
SSSCA1-207ENST00000533115 PQLC2Q6ZP29 291 aa21.28■■□□□ 1
SSSCA1-207ENST00000533115 HSD17B11Q8NBQ5 300 aa21.28■■□□□ 1
SSSCA1-207ENST00000533115 OR10G4Q8NGN3 311 aa21.28■■□□□ 1
SSSCA1-207ENST00000533115 OR10G9Q8NGN4 311 aa21.28■■□□□ 1
SSSCA1-207ENST00000533115 OR10G7Q8NGN6 311 aa21.28■■□□□ 1
SSSCA1-207ENST00000533115 TRBV7-9A0A0J9YWB2 115 aa21.27■■□□□ 1
SSSCA1-207ENST00000533115 DAZ2Q13117 558 aaKnown RBP21.27■■□□□ 1
SSSCA1-207ENST00000533115 EIF4E3Q8N5X7 224 aaKnown RBP21.27■■□□□ 1
SSSCA1-207ENST00000533115 ZNF680Q8NEM1 530 aa21.27■■□□□ 1
SSSCA1-207ENST00000533115 OR2G3Q8NGZ4 309 aa21.27■■□□□ 1
SSSCA1-207ENST00000533115 Q8TAT8 98 aa21.27■■□□□ 1
SSSCA1-207ENST00000533115 RXFP4Q8TDU9 374 aa21.27■■□□□ 1
SSSCA1-207ENST00000533115 GAGE12BA1L429 117 aa21.26■□□□□ 0.99
SSSCA1-207ENST00000533115 GAGE7O76087 117 aa21.26■□□□□ 0.99
SSSCA1-207ENST00000533115 GAGE12FP0CL80 117 aa21.26■□□□□ 0.99
SSSCA1-207ENST00000533115 GAGE12GP0CL81 117 aa21.26■□□□□ 0.99
SSSCA1-207ENST00000533115 GAGE12IP0CL82 117 aa21.26■□□□□ 0.99
SSSCA1-207ENST00000533115 ANXA2RQ3ZCQ2 193 aa21.26■□□□□ 0.99
SSSCA1-207ENST00000533115 DIRC3C9JPN6 131 aa21.25■□□□□ 0.99
SSSCA1-207ENST00000533115 C11orf72Q8NBR9 251 aa21.25■□□□□ 0.99
SSSCA1-207ENST00000533115 PSMG3Q9BT73 122 aaPredicted RBP21.25■□□□□ 0.99
SSSCA1-207ENST00000533115 OTORQ9NRC9 128 aa21.25■□□□□ 0.99
SSSCA1-207ENST00000533115 GSN-AS1Q9NRJ2 163 aa21.25■□□□□ 0.99
SSSCA1-207ENST00000533115 INO80EQ8NBZ0 244 aaPredicted RBP21.24■□□□□ 0.99
SSSCA1-207ENST00000533115 HYLS1Q96M11 299 aa21.24■□□□□ 0.99
SSSCA1-207ENST00000533115 PGPA6NDG6 321 aa21.23■□□□□ 0.99
SSSCA1-207ENST00000533115 NUDT3O95989 172 aa21.23■□□□□ 0.99
SSSCA1-207ENST00000533115 ATP6V0CP27449 155 aa21.23■□□□□ 0.99
SSSCA1-207ENST00000533115 FAM74A1Q5RGS3 127 aa21.23■□□□□ 0.99
SSSCA1-207ENST00000533115 M0R2N4 97 aa21.22■□□□□ 0.99
SSSCA1-207ENST00000533115 RGS13O14921 159 aa21.22■□□□□ 0.99
SSSCA1-207ENST00000533115 HMGB3O15347 200 aaKnown RBP21.22■□□□□ 0.99
SSSCA1-207ENST00000533115 CDC34P49427 236 aaPredicted RBP21.22■□□□□ 0.99
SSSCA1-207ENST00000533115 Q6ZQT7 251 aa21.22■□□□□ 0.99
SSSCA1-207ENST00000533115 Q6ZTI0 123 aa21.22■□□□□ 0.99
SSSCA1-207ENST00000533115 CMTM2Q8TAZ6 248 aa21.22■□□□□ 0.99
SSSCA1-207ENST00000533115 LGALS9BQ3B8N2 356 aa21.21■□□□□ 0.99
SSSCA1-207ENST00000533115 OR2T35Q8NGX2 323 aa21.21■□□□□ 0.99
SSSCA1-207ENST00000533115 DNAH2Q9P225 4427 aa21.21■□□□□ 0.99
SSSCA1-207ENST00000533115 IGHV1OR15-1A0A075B7D0 117 aa21.2■□□□□ 0.98
SSSCA1-207ENST00000533115 FXYD6-FXYD2A0A087WZ82 144 aa21.2■□□□□ 0.98
SSSCA1-207ENST00000533115 RNF222A6NCQ9 220 aa21.2■□□□□ 0.98
SSSCA1-207ENST00000533115 SERF2P84101 59 aa21.2■□□□□ 0.98
SSSCA1-207ENST00000533115 OR5I1Q13606 314 aa21.2■□□□□ 0.98
SSSCA1-207ENST00000533115 ATG101Q9BSB4 218 aa21.2■□□□□ 0.98
SSSCA1-207ENST00000533115 TNFSF18Q9UNG2 199 aa21.2■□□□□ 0.98
SSSCA1-207ENST00000533115 LENEPQ9Y5L5 61 aa21.2■□□□□ 0.98
SSSCA1-207ENST00000533115 HECTD4Q9Y4D8 3996 aa21.2■□□□□ 0.98
SSSCA1-207ENST00000533115 MBP02144 154 aa21.19■□□□□ 0.98
SSSCA1-207ENST00000533115 STAG3L2P0CL84 134 aa21.19■□□□□ 0.98
SSSCA1-207ENST00000533115 STAG3L3P0CL85 134 aa21.19■□□□□ 0.98
SSSCA1-207ENST00000533115 ARL14EPLP0DKL9 152 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms