RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 IGHV1OR15-1A0A075B7D0 117 aa8.58□□□□□ -1.04
COLCA1-203ENST00000532918 IGHV7-4-1A0A0J9YVY3 117 aa8.58□□□□□ -1.04
COLCA1-203ENST00000532918 KIF26BQ2KJY2 2108 aa8.58□□□□□ -1.04
COLCA1-203ENST00000532918 CDKN1BP46527 198 aa8.58□□□□□ -1.04
COLCA1-203ENST00000532918 LSM4Q9Y4Z0 139 aaKnown RBP8.58□□□□□ -1.04
COLCA1-203ENST00000532918 ALPK2Q86TB3 2170 aa8.57□□□□□ -1.04
COLCA1-203ENST00000532918 LRRC75A-AS1Q8N1F1 130 aa8.57□□□□□ -1.04
COLCA1-203ENST00000532918 ZNF664Q8N3J9 261 aa8.57□□□□□ -1.04
COLCA1-203ENST00000532918 NUP210Q8TEM1 1887 aaPredicted RBP8.57□□□□□ -1.04
COLCA1-203ENST00000532918 CGB3P0DN86 165 aa8.57□□□□□ -1.04
COLCA1-203ENST00000532918 SS18L2Q9UHA2 77 aa8.57□□□□□ -1.04
COLCA1-203ENST00000532918 PAX4O43316 350 aa8.57□□□□□ -1.04
COLCA1-203ENST00000532918 SPINK13Q1W4C9 94 aa8.57□□□□□ -1.04
COLCA1-203ENST00000532918 ANAPC10Q9UM13 185 aa8.57□□□□□ -1.04
COLCA1-203ENST00000532918 PLXNA4Q9HCM2 1894 aa8.57□□□□□ -1.04
COLCA1-203ENST00000532918 SOCS3O14543 225 aa8.57□□□□□ -1.04
COLCA1-203ENST00000532918 GAGE1Q13065 139 aa8.57□□□□□ -1.04
COLCA1-203ENST00000532918 C14orf178Q8N769 122 aaPredicted RBP8.57□□□□□ -1.04
COLCA1-203ENST00000532918 HS3ST6Q96QI5 342 aa8.57□□□□□ -1.04
COLCA1-203ENST00000532918 VSIRQ9H7M9 311 aa8.57□□□□□ -1.04
COLCA1-203ENST00000532918 SRSF3P84103 164 aaKnown RBP8.56□□□□□ -1.04
COLCA1-203ENST00000532918 TMEM75Q8N9X5 138 aa8.56□□□□□ -1.04
COLCA1-203ENST00000532918 LIME1Q9H400 295 aa8.56□□□□□ -1.04
COLCA1-203ENST00000532918 TSC2P49815 1807 aa8.56□□□□□ -1.04
COLCA1-203ENST00000532918 hDV102S1A0JD36 115 aa8.56□□□□□ -1.04
COLCA1-203ENST00000532918 FHL1Q13642 323 aa8.56□□□□□ -1.04
COLCA1-203ENST00000532918 WDR86Q86TI4 376 aa8.56□□□□□ -1.04
COLCA1-203ENST00000532918 SMIM20Q8N5G0 67 aa8.56□□□□□ -1.04
COLCA1-203ENST00000532918 CSTL1Q9H114 145 aa8.56□□□□□ -1.04
COLCA1-203ENST00000532918 WDR81Q562E7 1941 aa8.56□□□□□ -1.04
COLCA1-203ENST00000532918 B5MCH6 92 aa8.56□□□□□ -1.04
COLCA1-203ENST00000532918 C22orf46C9J442 243 aa8.56□□□□□ -1.04
COLCA1-203ENST00000532918 IGFL4Q6B9Z1 124 aa8.56□□□□□ -1.04
COLCA1-203ENST00000532918 OR11H6Q8NGC7 330 aa8.56□□□□□ -1.04
COLCA1-203ENST00000532918 GAGE12HA6NDE8 117 aa8.56□□□□□ -1.04
COLCA1-203ENST00000532918 NDUFS7O75251 213 aa8.56□□□□□ -1.04
COLCA1-203ENST00000532918 CFPP27918 469 aa8.56□□□□□ -1.04
COLCA1-203ENST00000532918 VWC2Q2TAL6 325 aa8.56□□□□□ -1.04
COLCA1-203ENST00000532918 CHAC1Q9BUX1 264 aa8.56□□□□□ -1.04
COLCA1-203ENST00000532918 FREM3P0C091 2139 aa8.56□□□□□ -1.04
COLCA1-203ENST00000532918 IGHV3-64A0A075B6Q5 118 aa8.55□□□□□ -1.04
COLCA1-203ENST00000532918 CXCL1P09341 107 aa8.55□□□□□ -1.04
COLCA1-203ENST00000532918 C5orf47Q569G3 176 aa8.55□□□□□ -1.04
COLCA1-203ENST00000532918 ZNF503-AS2A6NEH8 195 aa8.55□□□□□ -1.04
COLCA1-203ENST00000532918 FBXL19-AS1Q494R0 122 aa8.55□□□□□ -1.04
COLCA1-203ENST00000532918 ARTNQ5T4W7 220 aa8.55□□□□□ -1.04
COLCA1-203ENST00000532918 ZNRD1Q9P1U0 126 aa8.55□□□□□ -1.04
COLCA1-203ENST00000532918 HEATR1Q9H583 2144 aaKnown RBP8.55□□□□□ -1.04
COLCA1-203ENST00000532918 C3orf79P0CE67 100 aa8.55□□□□□ -1.04
COLCA1-203ENST00000532918 UTF1Q5T230 341 aa8.55□□□□□ -1.04
COLCA1-203ENST00000532918 Q86TA4 180 aa8.55□□□□□ -1.04
COLCA1-203ENST00000532918 TMEM256Q8N2U0 113 aa8.55□□□□□ -1.04
COLCA1-203ENST00000532918 IL17DQ8TAD2 202 aa8.55□□□□□ -1.04
COLCA1-203ENST00000532918 PRO3102Q9H379 93 aa8.55□□□□□ -1.04
COLCA1-203ENST00000532918 FAM231BA6NCW3 169 aa8.55□□□□□ -1.04
COLCA1-203ENST00000532918 DKK1O94907 266 aa8.55□□□□□ -1.04
COLCA1-203ENST00000532918 C8orf86Q6ZUL3 223 aa8.55□□□□□ -1.04
COLCA1-203ENST00000532918 LY6G5BQ8NDX9 201 aa8.55□□□□□ -1.04
COLCA1-203ENST00000532918 PFN1P07737 140 aaKnown RBP8.54□□□□□ -1.04
COLCA1-203ENST00000532918 NPC2P61916 151 aa8.54□□□□□ -1.04
COLCA1-203ENST00000532918 DUX4L9Q6RFH8 374 aaPredicted RBP8.54□□□□□ -1.04
COLCA1-203ENST00000532918 FOXI2Q6ZQN5 318 aa8.54□□□□□ -1.04
COLCA1-203ENST00000532918 UBL5Q9BZL1 73 aa8.54□□□□□ -1.04
COLCA1-203ENST00000532918 A8MWP6 167 aa8.54□□□□□ -1.04
COLCA1-203ENST00000532918 F8W1H4 67 aa8.54□□□□□ -1.04
COLCA1-203ENST00000532918 ARMS2P0C7Q2 107 aa8.54□□□□□ -1.04
COLCA1-203ENST00000532918 A0A1B0GW64 132 aa8.54□□□□□ -1.04
COLCA1-203ENST00000532918 D6R8Y8 96 aa8.54□□□□□ -1.04
COLCA1-203ENST00000532918 C15orf65H3BRN8 121 aa8.54□□□□□ -1.04
COLCA1-203ENST00000532918 K7EP13 123 aa8.54□□□□□ -1.04
COLCA1-203ENST00000532918 PAX9P55771 341 aa8.54□□□□□ -1.04
COLCA1-203ENST00000532918 SUMO4Q6EEV6 95 aa8.54□□□□□ -1.04
COLCA1-203ENST00000532918 A0A087WWL8 130 aa8.54□□□□□ -1.04
COLCA1-203ENST00000532918 MYMXA0A1B0GTQ4 84 aa8.54□□□□□ -1.04
COLCA1-203ENST00000532918 LINC00205P59089 165 aa8.54□□□□□ -1.04
COLCA1-203ENST00000532918 SRSF2Q01130 221 aaKnown RBP8.54□□□□□ -1.04
COLCA1-203ENST00000532918 RNF144BQ7Z419 303 aa8.54□□□□□ -1.04
COLCA1-203ENST00000532918 GFRA4Q9GZZ7 299 aa8.54□□□□□ -1.04
COLCA1-203ENST00000532918 HOXD3P31249 432 aaPredicted RBP8.53□□□□□ -1.04
COLCA1-203ENST00000532918 TRAV13-1A0A0B4J241 112 aa8.53□□□□□ -1.04
COLCA1-203ENST00000532918 CENPVL3A0A0U1RRI6 287 aa8.53□□□□□ -1.04
COLCA1-203ENST00000532918 NPSP0C0P6 89 aa8.53□□□□□ -1.04
COLCA1-203ENST00000532918 GP9P14770 177 aa8.53□□□□□ -1.04
COLCA1-203ENST00000532918 RPP25LQ8N5L8 163 aaKnown RBP8.53□□□□□ -1.04
COLCA1-203ENST00000532918 SPTBN1Q01082 2364 aaKnown RBP8.53□□□□□ -1.04
COLCA1-203ENST00000532918 CFHR3Q02985 330 aa8.53□□□□□ -1.04
COLCA1-203ENST00000532918 ETDBQ3ZM63 59 aa8.53□□□□□ -1.04
COLCA1-203ENST00000532918 SYS1-DBNDD2H3BUS1 97 aa8.53□□□□□ -1.04
COLCA1-203ENST00000532918 CGB7P0DN87 165 aa8.53□□□□□ -1.04
COLCA1-203ENST00000532918 MYCNOSP40205 109 aa8.53□□□□□ -1.04
COLCA1-203ENST00000532918 IGKV1-6A0A0C4DH72 117 aa8.53□□□□□ -1.04
COLCA1-203ENST00000532918 CLPSL1A2RUU4 121 aa8.53□□□□□ -1.04
COLCA1-203ENST00000532918 LEPROTO15243 131 aa8.53□□□□□ -1.04
COLCA1-203ENST00000532918 TMEM14CQ9P0S9 112 aa8.53□□□□□ -1.04
COLCA1-203ENST00000532918 ZNF581Q9P0T4 197 aa8.53□□□□□ -1.04
COLCA1-203ENST00000532918 CACNA1DQ01668 2161 aa8.52□□□□□ -1.04
COLCA1-203ENST00000532918 CACNA1HO95180 2353 aa8.52□□□□□ -1.05
COLCA1-203ENST00000532918 KNCNA6PVL3 124 aa8.52□□□□□ -1.05
COLCA1-203ENST00000532918 C5orf24Q7Z6I8 188 aa8.52□□□□□ -1.05
COLCA1-203ENST00000532918 C20orf144Q9BQM9 153 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms