RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 ODF3Q96PU9 254 aa17.95■□□□□ 0.46
USP48-214ENST00000532737 GOLT1BQ9Y3E0 138 aa17.95■□□□□ 0.46
USP48-214ENST00000532737 IGHV4-28A0A0C4DH34 117 aa17.94■□□□□ 0.46
USP48-214ENST00000532737 DEFB4AO15263 64 aa17.94■□□□□ 0.46
USP48-214ENST00000532737 INSP01308 110 aa17.94■□□□□ 0.46
USP48-214ENST00000532737 TSPOP30536 169 aa17.94■□□□□ 0.46
USP48-214ENST00000532737 GGTLC3B5MD39 225 aa17.93■□□□□ 0.46
USP48-214ENST00000532737 RBMY1A1P0DJD3 496 aaKnown RBP17.93■□□□□ 0.46
USP48-214ENST00000532737 RBMY1CP0DJD4 496 aa17.93■□□□□ 0.46
USP48-214ENST00000532737 RBMY1FQ15415 496 aaKnown RBP17.93■□□□□ 0.46
USP48-214ENST00000532737 SFT2D1Q8WV19 159 aa17.93■□□□□ 0.46
USP48-214ENST00000532737 FAM19A4Q96LR4 140 aa17.93■□□□□ 0.46
USP48-214ENST00000532737 RPH3ALQ9UNE2 315 aa17.93■□□□□ 0.46
USP48-214ENST00000532737 YTHDF2Q9Y5A9 579 aaKnown RBP17.93■□□□□ 0.46
USP48-214ENST00000532737 RBAKDNA6NC62 111 aa17.92■□□□□ 0.46
USP48-214ENST00000532737 SLC25A5P05141 298 aaKnown RBP17.92■□□□□ 0.46
USP48-214ENST00000532737 MIFP14174 115 aa17.92■□□□□ 0.46
USP48-214ENST00000532737 LEPP41159 167 aa17.92■□□□□ 0.46
USP48-214ENST00000532737 SUMO1P63165 101 aaKnown RBP17.92■□□□□ 0.46
USP48-214ENST00000532737 GNG5P63218 68 aa17.92■□□□□ 0.46
USP48-214ENST00000532737 TMEM78Q5T7P6 136 aa17.92■□□□□ 0.46
USP48-214ENST00000532737 ARL6IP6Q8N6S5 226 aa17.92■□□□□ 0.46
USP48-214ENST00000532737 NEU1Q99519 415 aa17.92■□□□□ 0.46
USP48-214ENST00000532737 BOLA1Q9Y3E2 137 aa17.92■□□□□ 0.46
USP48-214ENST00000532737 A0A1W2PRE2 83 aa17.91■□□□□ 0.46
USP48-214ENST00000532737 J3KRW8 73 aa17.91■□□□□ 0.46
USP48-214ENST00000532737 ZNF138P52744 262 aa17.91■□□□□ 0.46
USP48-214ENST00000532737 UBE2G2P60604 165 aa17.91■□□□□ 0.46
USP48-214ENST00000532737 GFI1BQ5VTD9 330 aa17.91■□□□□ 0.46
USP48-214ENST00000532737 GOLT1AQ6ZVE7 132 aa17.91■□□□□ 0.46
USP48-214ENST00000532737 C11orf68Q9H3H3 251 aaKnown RBP17.91■□□□□ 0.46
USP48-214ENST00000532737 ZNF492Q9P255 531 aa17.91■□□□□ 0.46
USP48-214ENST00000532737 H2AFB1P0C5Y9 115 aa17.9■□□□□ 0.46
USP48-214ENST00000532737 SULT1A2P50226 295 aa17.9■□□□□ 0.46
USP48-214ENST00000532737 RAB5CP51148 216 aa17.9■□□□□ 0.46
USP48-214ENST00000532737 C5orf17Q8NAS9 161 aa17.9■□□□□ 0.46
USP48-214ENST00000532737 Q8TAT8 98 aa17.9■□□□□ 0.46
USP48-214ENST00000532737 TMEM208Q9BTX3 173 aa17.9■□□□□ 0.46
USP48-214ENST00000532737 DNAH7Q8WXX0 4024 aa17.9■□□□□ 0.46
USP48-214ENST00000532737 A0A1B0GV50 99 aa17.89■□□□□ 0.45
USP48-214ENST00000532737 C3orf84H3BNL1 204 aa17.89■□□□□ 0.45
USP48-214ENST00000532737 MUC7Q8TAX7 377 aa17.89■□□□□ 0.45
USP48-214ENST00000532737 DYNC2H1Q8NCM8 4307 aaKnown RBP17.88■□□□□ 0.45
USP48-214ENST00000532737 SMIM9A6NGZ8 99 aa17.88■□□□□ 0.45
USP48-214ENST00000532737 FAM74A7A6NL05 159 aa17.88■□□□□ 0.45
USP48-214ENST00000532737 CRISP2P16562 243 aa17.88■□□□□ 0.45
USP48-214ENST00000532737 ZFAND2AQ8N6M9 145 aa17.88■□□□□ 0.45
USP48-214ENST00000532737 KLLNB2CW77 178 aa17.87■□□□□ 0.45
USP48-214ENST00000532737 TCRAP04437 139 aa17.87■□□□□ 0.45
USP48-214ENST00000532737 PRM2P04554 102 aa17.87■□□□□ 0.45
USP48-214ENST00000532737 EPDR1Q9UM22 224 aa17.87■□□□□ 0.45
USP48-214ENST00000532737 ZNF705GA8MUZ8 300 aaPredicted RBP17.86■□□□□ 0.45
USP48-214ENST00000532737 HBE1P02100 147 aa17.86■□□□□ 0.45
USP48-214ENST00000532737 IL17DQ8TAD2 202 aa17.86■□□□□ 0.45
USP48-214ENST00000532737 LINC01587Q99440 93 aa17.86■□□□□ 0.45
USP48-214ENST00000532737 TRAV8-1A0A0A6YYK1 113 aa17.85■□□□□ 0.45
USP48-214ENST00000532737 TRAV12-3A0A0B4J271 114 aa17.85■□□□□ 0.45
USP48-214ENST00000532737 NMBP08949 121 aa17.85■□□□□ 0.45
USP48-214ENST00000532737 TMEM256Q8N2U0 113 aa17.85■□□□□ 0.45
USP48-214ENST00000532737 C20orf144Q9BQM9 153 aa17.85■□□□□ 0.45
USP48-214ENST00000532737 TENM2Q9NT68 2774 aa17.85■□□□□ 0.45
USP48-214ENST00000532737 TRBV7-9A0A0J9YWB2 115 aa17.84■□□□□ 0.45
USP48-214ENST00000532737 C7orf71A4D174 169 aa17.84■□□□□ 0.45
USP48-214ENST00000532737 RNASE4P34096 147 aaKnown RBP17.84■□□□□ 0.45
USP48-214ENST00000532737 CCL20P78556 96 aa17.84■□□□□ 0.45
USP48-214ENST00000532737 BTN1A1Q13410 526 aa17.84■□□□□ 0.45
USP48-214ENST00000532737 RRN3P1Q2M238 152 aa17.84■□□□□ 0.45
USP48-214ENST00000532737 PRR9Q5T870 116 aa17.84■□□□□ 0.45
USP48-214ENST00000532737 SGK494Q96LW2 274 aa17.84■□□□□ 0.45
USP48-214ENST00000532737 TRAV1-1A0A0B4J248 108 aa17.83■□□□□ 0.44
USP48-214ENST00000532737 SERTM2A0A1B0GWG4 89 aa17.83■□□□□ 0.44
USP48-214ENST00000532737 PAGE4O60829 102 aa17.83■□□□□ 0.44
USP48-214ENST00000532737 IFNA7P01567 189 aa17.83■□□□□ 0.44
USP48-214ENST00000532737 GPX1P07203 203 aa17.83■□□□□ 0.44
USP48-214ENST00000532737 ALKAL2Q6UX46 152 aa17.83■□□□□ 0.44
USP48-214ENST00000532737 NKX6-2Q9C056 277 aaPredicted RBP17.83■□□□□ 0.44
USP48-214ENST00000532737 LENEPQ9Y5L5 61 aa17.83■□□□□ 0.44
USP48-214ENST00000532737 LOC102723971A0A1B0GUV8 181 aa17.82■□□□□ 0.44
USP48-214ENST00000532737 H7BYZ3 331 aa17.82■□□□□ 0.44
USP48-214ENST00000532737 AZU1P20160 251 aa17.82■□□□□ 0.44
USP48-214ENST00000532737 TAS2R60P59551 318 aa17.82■□□□□ 0.44
USP48-214ENST00000532737 CST9LP1Q5W188 147 aa17.82■□□□□ 0.44
USP48-214ENST00000532737 CCDC28AQ8IWP9 274 aa17.82■□□□□ 0.44
USP48-214ENST00000532737 TVP23CQ96ET8 276 aa17.82■□□□□ 0.44
USP48-214ENST00000532737 ATG101Q9BSB4 218 aa17.82■□□□□ 0.44
USP48-214ENST00000532737 ZNF324O75467 553 aaPredicted RBP17.81■□□□□ 0.44
USP48-214ENST00000532737 ATP5G3P48201 142 aa17.81■□□□□ 0.44
USP48-214ENST00000532737 EMP1P54849 157 aa17.81■□□□□ 0.44
USP48-214ENST00000532737 ZFAND6Q6FIF0 208 aa17.81■□□□□ 0.44
USP48-214ENST00000532737 CYB561D1Q8N8Q1 229 aa17.81■□□□□ 0.44
USP48-214ENST00000532737 C11orf45Q8TAV5 145 aa17.81■□□□□ 0.44
USP48-214ENST00000532737 ARL2-SNX15V9GYD0 113 aa17.81■□□□□ 0.44
USP48-214ENST00000532737 K7EQM0 130 aa17.8■□□□□ 0.44
USP48-214ENST00000532737 IGLV2-11P01706 119 aa17.8■□□□□ 0.44
USP48-214ENST00000532737 HTN1P15515 57 aa17.8■□□□□ 0.44
USP48-214ENST00000532737 CASC10Q5T4H9 136 aa17.8■□□□□ 0.44
USP48-214ENST00000532737 Q6ZQT7 251 aa17.8■□□□□ 0.44
USP48-214ENST00000532737 LINC00479Q96M42 142 aa17.8■□□□□ 0.44
USP48-214ENST00000532737 NIPSNAP3BQ9BS92 247 aa17.8■□□□□ 0.44
USP48-214ENST00000532737 RYR2Q92736 4967 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms