RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 CFHR2P36980 270 aa7.03□□□□□ -1.28
CTNND1-232ENST00000532649 HAMPP81172 84 aa7.03□□□□□ -1.28
CTNND1-232ENST00000532649 A0A1W2PNU3 283 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-232ENST00000532649 GAGE12BA1L429 117 aa7.03□□□□□ -1.28
CTNND1-232ENST00000532649 GAGE7O76087 117 aa7.03□□□□□ -1.28
CTNND1-232ENST00000532649 GAGE12FP0CL80 117 aa7.03□□□□□ -1.28
CTNND1-232ENST00000532649 GAGE12GP0CL81 117 aa7.03□□□□□ -1.28
CTNND1-232ENST00000532649 GAGE12IP0CL82 117 aa7.03□□□□□ -1.28
CTNND1-232ENST00000532649 TMEM243Q9BU79 118 aa7.03□□□□□ -1.28
CTNND1-232ENST00000532649 BDP1A6H8Y1 2624 aa7.02□□□□□ -1.28
CTNND1-232ENST00000532649 GAGE6Q13070 117 aa7.02□□□□□ -1.29
CTNND1-232ENST00000532649 PSG3Q16557 428 aa7.02□□□□□ -1.29
CTNND1-232ENST00000532649 NEGR1Q7Z3B1 354 aa7.02□□□□□ -1.29
CTNND1-232ENST00000532649 TMEM170AQ8WVE7 144 aa7.02□□□□□ -1.29
CTNND1-232ENST00000532649 SEC61GP60059 68 aa7.02□□□□□ -1.29
CTNND1-232ENST00000532649 RPL18AQ02543 176 aaKnown RBP7.02□□□□□ -1.29
CTNND1-232ENST00000532649 EXOC3-AS1Q8N2X6 119 aa7.02□□□□□ -1.29
CTNND1-232ENST00000532649 PLXNB3Q9ULL4 1909 aa7.02□□□□□ -1.29
CTNND1-232ENST00000532649 IGHV3-16A0A0C4DH30 117 aa7.02□□□□□ -1.29
CTNND1-232ENST00000532649 IGKV1-6A0A0C4DH72 117 aa7.02□□□□□ -1.29
CTNND1-232ENST00000532649 TMEM14EPQ6UXP3 125 aa7.02□□□□□ -1.29
CTNND1-232ENST00000532649 GTF3C1Q12789 2109 aa7.02□□□□□ -1.29
CTNND1-232ENST00000532649 ATP6V0E1O15342 81 aa7.02□□□□□ -1.29
CTNND1-232ENST00000532649 TIRAPP58753 221 aa7.02□□□□□ -1.29
CTNND1-232ENST00000532649 TEX36Q5VZQ5 186 aa7.02□□□□□ -1.29
CTNND1-232ENST00000532649 CARHSP1Q9Y2V2 147 aaKnown RBP7.02□□□□□ -1.29
CTNND1-232ENST00000532649 A0A0G2JRQ6 117 aa7.02□□□□□ -1.29
CTNND1-232ENST00000532649 RSPO1Q2MKA7 263 aaPredicted RBP7.02□□□□□ -1.29
CTNND1-232ENST00000532649 DEFB105AQ8NG35 78 aa7.02□□□□□ -1.29
CTNND1-232ENST00000532649 SHISA9B4DS77 424 aa7.01□□□□□ -1.29
CTNND1-232ENST00000532649 IGF2BP2-AS1Q96M15 143 aa7.01□□□□□ -1.29
CTNND1-232ENST00000532649 LIME1Q9H400 295 aa7.01□□□□□ -1.29
CTNND1-232ENST00000532649 I3L3M4 83 aa7.01□□□□□ -1.29
CTNND1-232ENST00000532649 NXPH4O95158 308 aa7.01□□□□□ -1.29
CTNND1-232ENST00000532649 RNASE2P10153 161 aaKnown RBP7.01□□□□□ -1.29
CTNND1-232ENST00000532649 REG4Q9BYZ8 158 aa7.01□□□□□ -1.29
CTNND1-232ENST00000532649 EGR2P11161 476 aaPredicted RBP7.01□□□□□ -1.29
CTNND1-232ENST00000532649 C17orf58Q2M2W7 97 aa7.01□□□□□ -1.29
CTNND1-232ENST00000532649 IL17RELQ6ZVW7 336 aa7.01□□□□□ -1.29
CTNND1-232ENST00000532649 BCL6BQ8N143 479 aaPredicted RBP7.01□□□□□ -1.29
CTNND1-232ENST00000532649 ZNF503Q96F45 646 aa7.01□□□□□ -1.29
CTNND1-232ENST00000532649 OVOL3O00110 214 aa7.01□□□□□ -1.29
CTNND1-232ENST00000532649 NDUFS7O75251 213 aa7.01□□□□□ -1.29
CTNND1-232ENST00000532649 RFNGQ9Y644 331 aa7.01□□□□□ -1.29
CTNND1-232ENST00000532649 A0A1W2PPI3 338 aa7□□□□□ -1.29
CTNND1-232ENST00000532649 DKK1O94907 266 aa7□□□□□ -1.29
CTNND1-232ENST00000532649 TMEM141Q96I45 108 aa7□□□□□ -1.29
CTNND1-232ENST00000532649 NAA38Q9BRA0 125 aaKnown RBP7□□□□□ -1.29
CTNND1-232ENST00000532649 CADP27708 2225 aa7□□□□□ -1.29
CTNND1-232ENST00000532649 C15orf62A8K5M9 175 aa7□□□□□ -1.29
CTNND1-232ENST00000532649 J3QLI3 93 aa7□□□□□ -1.29
CTNND1-232ENST00000532649 IGHG4P01861 327 aa7□□□□□ -1.29
CTNND1-232ENST00000532649 MLANAQ16655 118 aa7□□□□□ -1.29
CTNND1-232ENST00000532649 DMRTC2Q8IXT2 367 aaPredicted RBP7□□□□□ -1.29
CTNND1-232ENST00000532649 DOPEY2Q9Y3R5 2298 aa7□□□□□ -1.29
CTNND1-232ENST00000532649 NDUFC2O95298 119 aa7□□□□□ -1.29
CTNND1-232ENST00000532649 ANGP03950 147 aaKnown RBP7□□□□□ -1.29
CTNND1-232ENST00000532649 A0A096LPF7 62 aa7□□□□□ -1.29
CTNND1-232ENST00000532649 C1QL4Q86Z23 238 aa7□□□□□ -1.29
CTNND1-232ENST00000532649 OCC1Q8TAD7 63 aa7□□□□□ -1.29
CTNND1-232ENST00000532649 SRSF8Q9BRL6 282 aaKnown RBP7□□□□□ -1.29
CTNND1-232ENST00000532649 SRSF3P84103 164 aaKnown RBP7□□□□□ -1.29
CTNND1-232ENST00000532649 Q6ZRM9 215 aa7□□□□□ -1.29
CTNND1-232ENST00000532649 C1orf43Q9BWL3 253 aa7□□□□□ -1.29
CTNND1-232ENST00000532649 KNCNA6PVL3 124 aa6.99□□□□□ -1.29
CTNND1-232ENST00000532649 NDUFB1O75438 58 aa6.99□□□□□ -1.29
CTNND1-232ENST00000532649 SLAQ13239 276 aa6.99□□□□□ -1.29
CTNND1-232ENST00000532649 ZNF833PQ6ZTB9 187 aa6.99□□□□□ -1.29
CTNND1-232ENST00000532649 LOC105371267A0A1B0GV96 52 aa6.99□□□□□ -1.29
CTNND1-232ENST00000532649 IGFL4Q6B9Z1 124 aa6.99□□□□□ -1.29
CTNND1-232ENST00000532649 Q8TAT8 98 aa6.99□□□□□ -1.29
CTNND1-232ENST00000532649 C9JAW5 83 aa6.99□□□□□ -1.29
CTNND1-232ENST00000532649 CFPP27918 469 aa6.99□□□□□ -1.29
CTNND1-232ENST00000532649 UTF1Q5T230 341 aa6.99□□□□□ -1.29
CTNND1-232ENST00000532649 KLK9Q9UKQ9 250 aa6.99□□□□□ -1.29
CTNND1-232ENST00000532649 G3V318 75 aa6.99□□□□□ -1.29
CTNND1-232ENST00000532649 SVIPQ8NHG7 77 aa6.99□□□□□ -1.29
CTNND1-232ENST00000532649 C1orf147Q96MC9 270 aaPredicted RBP6.99□□□□□ -1.29
CTNND1-232ENST00000532649 NCOR1P1Q9H4R4 102 aa6.99□□□□□ -1.29
CTNND1-232ENST00000532649 ADAMTSL5Q6ZMM2 481 aa6.99□□□□□ -1.29
CTNND1-232ENST00000532649 COL4A4P53420 1690 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-232ENST00000532649 LYPD1Q8N2G4 141 aa6.98□□□□□ -1.29
CTNND1-232ENST00000532649 ETDCA0A1B0GVM5 59 aa6.98□□□□□ -1.29
CTNND1-232ENST00000532649 Q9HAA7 133 aa6.98□□□□□ -1.29
CTNND1-232ENST00000532649 KLK5Q9Y337 293 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-232ENST00000532649 GUSBP1Q15486 140 aa6.98□□□□□ -1.29
CTNND1-232ENST00000532649 RPP25LQ8N5L8 163 aaKnown RBP6.98□□□□□ -1.29
CTNND1-232ENST00000532649 ZNRF2Q8NHG8 242 aa6.98□□□□□ -1.29
CTNND1-232ENST00000532649 TIMM17AQ99595 171 aa6.98□□□□□ -1.29
CTNND1-232ENST00000532649 SPRY4Q9C004 299 aa6.98□□□□□ -1.29
CTNND1-232ENST00000532649 CYTL1Q9NRR1 136 aa6.98□□□□□ -1.29
CTNND1-232ENST00000532649 COL4A3Q01955 1670 aa6.98□□□□□ -1.29
CTNND1-232ENST00000532649 DLEU1O43261 78 aa6.98□□□□□ -1.29
CTNND1-232ENST00000532649 FGF16O43320 207 aa6.98□□□□□ -1.29
CTNND1-232ENST00000532649 AGMATQ9BSE5 352 aa6.98□□□□□ -1.29
CTNND1-232ENST00000532649 TRAV12-1A0A0B4J245 112 aa6.97□□□□□ -1.29
CTNND1-232ENST00000532649 RBM3P98179 157 aaKnown RBP6.97□□□□□ -1.29
CTNND1-232ENST00000532649 SPINK13Q1W4C9 94 aa6.97□□□□□ -1.29
CTNND1-232ENST00000532649 UBE2AP49459 152 aa6.97□□□□□ -1.29
CTNND1-232ENST00000532649 CCL18P55774 89 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms