RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 SMIM27A0A1W2PRY6 76 aa6.53□□□□□ -1.36
CTNND1-231ENST00000532463 IGKV1-39P01597 117 aa6.53□□□□□ -1.36
CTNND1-231ENST00000532463 IGKV1D-39P04432 117 aa6.53□□□□□ -1.36
CTNND1-231ENST00000532463 APOC4P55056 127 aa6.53□□□□□ -1.36
CTNND1-231ENST00000532463 RNASE8Q8TDE3 154 aaKnown RBP6.53□□□□□ -1.36
CTNND1-231ENST00000532463 WIPF3A6NGB9 483 aa6.52□□□□□ -1.37
CTNND1-231ENST00000532463 NDUFC1O43677 76 aa6.52□□□□□ -1.37
CTNND1-231ENST00000532463 NDUFV3P56181 108 aaKnown RBP6.52□□□□□ -1.37
CTNND1-231ENST00000532463 CAMK2N2Q96S95 79 aa6.52□□□□□ -1.37
CTNND1-231ENST00000532463 COL22A1Q8NFW1 1626 aaPredicted RBP6.52□□□□□ -1.37
CTNND1-231ENST00000532463 AKAP6Q13023 2319 aa6.52□□□□□ -1.37
CTNND1-231ENST00000532463 IGHV4OR15-8A0A075B7B6 117 aa6.52□□□□□ -1.37
CTNND1-231ENST00000532463 A0A087WW49 117 aa6.52□□□□□ -1.37
CTNND1-231ENST00000532463 H3BUX3 64 aa6.52□□□□□ -1.37
CTNND1-231ENST00000532463 WISP1O95388 367 aa6.52□□□□□ -1.37
CTNND1-231ENST00000532463 WFDC2Q14508 124 aa6.52□□□□□ -1.37
CTNND1-231ENST00000532463 RNF152Q8N8N0 203 aa6.52□□□□□ -1.37
CTNND1-231ENST00000532463 MDC1Q14676 2089 aaKnown RBP6.52□□□□□ -1.37
CTNND1-231ENST00000532463 IGKV1D-8A0A087WSZ0 117 aa6.52□□□□□ -1.37
CTNND1-231ENST00000532463 C15orf62A8K5M9 175 aa6.52□□□□□ -1.37
CTNND1-231ENST00000532463 H0YJW9 148 aa6.52□□□□□ -1.37
CTNND1-231ENST00000532463 ELANEP08246 267 aa6.52□□□□□ -1.37
CTNND1-231ENST00000532463 TRPM3Q9HCF6 1732 aaPredicted RBP6.52□□□□□ -1.37
CTNND1-231ENST00000532463 IGKV1-9A0A0C4DH69 117 aa6.52□□□□□ -1.37
CTNND1-231ENST00000532463 IGHV2-5P01817 119 aa6.52□□□□□ -1.37
CTNND1-231ENST00000532463 LYPD6BQ8NI32 183 aa6.52□□□□□ -1.37
CTNND1-231ENST00000532463 GAFA1Q96PS6 74 aa6.52□□□□□ -1.37
CTNND1-231ENST00000532463 A4D1N5 150 aa6.51□□□□□ -1.37
CTNND1-231ENST00000532463 GNLYP22749 145 aa6.51□□□□□ -1.37
CTNND1-231ENST00000532463 TRPM6Q9BX84 2022 aa6.51□□□□□ -1.37
CTNND1-231ENST00000532463 IGHV1-69DA0A0B4J2H0 117 aa6.51□□□□□ -1.37
CTNND1-231ENST00000532463 LECT2O14960 151 aa6.51□□□□□ -1.37
CTNND1-231ENST00000532463 CELA3BP08861 270 aa6.51□□□□□ -1.37
CTNND1-231ENST00000532463 CLPSL2Q6UWE3 100 aa6.51□□□□□ -1.37
CTNND1-231ENST00000532463 KIAA1551Q9HCM1 1747 aa6.51□□□□□ -1.37
CTNND1-231ENST00000532463 TOGARAM1Q9Y4F4 1720 aa6.51□□□□□ -1.37
CTNND1-231ENST00000532463 LGALS9O00182 355 aa6.51□□□□□ -1.37
CTNND1-231ENST00000532463 IGF2BP2-AS1Q96M15 143 aa6.51□□□□□ -1.37
CTNND1-231ENST00000532463 ZNF747Q9BV97 191 aa6.51□□□□□ -1.37
CTNND1-231ENST00000532463 RREB1Q92766 1687 aa6.51□□□□□ -1.37
CTNND1-231ENST00000532463 PCP2Q8IVA1 136 aa6.51□□□□□ -1.37
CTNND1-231ENST00000532463 V9GYV3 84 aa6.51□□□□□ -1.37
CTNND1-231ENST00000532463 RNASE13Q5GAN3 156 aaKnown RBP6.51□□□□□ -1.37
CTNND1-231ENST00000532463 PAQR4Q8N4S7 273 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-231ENST00000532463 FGFBP3Q8TAT2 258 aa6.51□□□□□ -1.37
CTNND1-231ENST00000532463 PRR25Q96S07 402 aa6.51□□□□□ -1.37
CTNND1-231ENST00000532463 SRRM5B3KS81 715 aa6.5□□□□□ -1.37
CTNND1-231ENST00000532463 TIMM17BO60830 172 aa6.5□□□□□ -1.37
CTNND1-231ENST00000532463 RFPL3SP0C7P2 107 aa6.5□□□□□ -1.37
CTNND1-231ENST00000532463 SMIM10L1P0DMW3 83 aa6.5□□□□□ -1.37
CTNND1-231ENST00000532463 ATP5EP2Q5VTU8 51 aa6.5□□□□□ -1.37
CTNND1-231ENST00000532463 SMIM10Q96HG1 83 aa6.5□□□□□ -1.37
CTNND1-231ENST00000532463 MRPS18CQ9Y3D5 142 aaKnown RBP6.5□□□□□ -1.37
CTNND1-231ENST00000532463 CHCHD2Q9Y6H1 151 aaPredicted RBP6.5□□□□□ -1.37
CTNND1-231ENST00000532463 SCN8AQ9UQD0 1980 aa6.5□□□□□ -1.37
CTNND1-231ENST00000532463 A0A087WV48 116 aa6.5□□□□□ -1.37
CTNND1-231ENST00000532463 MST1LQ2TV78 715 aa6.5□□□□□ -1.37
CTNND1-231ENST00000532463 TMEM200BQ69YZ2 307 aa6.5□□□□□ -1.37
CTNND1-231ENST00000532463 LYPD6Q86Y78 171 aa6.5□□□□□ -1.37
CTNND1-231ENST00000532463 PRDM6Q9NQX0 595 aa6.5□□□□□ -1.37
CTNND1-231ENST00000532463 DIRC1Q969H9 104 aa6.5□□□□□ -1.37
CTNND1-231ENST00000532463 B4DSR2 109 aa6.5□□□□□ -1.37
CTNND1-231ENST00000532463 IGHV1-46P01743 117 aa6.5□□□□□ -1.37
CTNND1-231ENST00000532463 IGHV4-59P01825 116 aa6.5□□□□□ -1.37
CTNND1-231ENST00000532463 UBE2E1P51965 193 aa6.5□□□□□ -1.37
CTNND1-231ENST00000532463 CFHR1Q03591 330 aa6.5□□□□□ -1.37
CTNND1-231ENST00000532463 SPACA3Q8IXA5 215 aa6.5□□□□□ -1.37
CTNND1-231ENST00000532463 SEC16AO15027 2179 aa6.5□□□□□ -1.37
CTNND1-231ENST00000532463 SCN2AQ99250 2005 aa6.49□□□□□ -1.37
CTNND1-231ENST00000532463 BCORQ6W2J9 1755 aa6.49□□□□□ -1.37
CTNND1-231ENST00000532463 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.49□□□□□ -1.37
CTNND1-231ENST00000532463 TIAF1O95411 115 aa6.49□□□□□ -1.37
CTNND1-231ENST00000532463 TFF1P04155 84 aa6.49□□□□□ -1.37
CTNND1-231ENST00000532463 SCN7AQ01118 1682 aa6.49□□□□□ -1.37
CTNND1-231ENST00000532463 EP300Q09472 2414 aaPredicted RBP6.49□□□□□ -1.37
CTNND1-231ENST00000532463 LYNX1G3V0Z9 82 aa6.49□□□□□ -1.37
CTNND1-231ENST00000532463 BUB1B-PAK6H3BSN5 160 aa6.49□□□□□ -1.37
CTNND1-231ENST00000532463 LYNX1P0DP58 116 aa6.49□□□□□ -1.37
CTNND1-231ENST00000532463 NRAPQ86VF7 1730 aa6.49□□□□□ -1.37
CTNND1-231ENST00000532463 ALPK2Q86TB3 2170 aa6.49□□□□□ -1.37
CTNND1-231ENST00000532463 IL9P15248 144 aa6.49□□□□□ -1.37
CTNND1-231ENST00000532463 ZNF134P52741 427 aa6.49□□□□□ -1.37
CTNND1-231ENST00000532463 C5orf38Q86SI9 138 aa6.49□□□□□ -1.37
CTNND1-231ENST00000532463 ABCA7Q8IZY2 2146 aa6.48□□□□□ -1.37
CTNND1-231ENST00000532463 ARFGEF3Q5TH69 2177 aa6.48□□□□□ -1.37
CTNND1-231ENST00000532463 PMAIP1Q13794 54 aa6.48□□□□□ -1.37
CTNND1-231ENST00000532463 C11orf52Q96A22 123 aa6.48□□□□□ -1.37
CTNND1-231ENST00000532463 E9PQ18 207 aa6.48□□□□□ -1.37
CTNND1-231ENST00000532463 LINC01619G3V211 115 aa6.48□□□□□ -1.37
CTNND1-231ENST00000532463 ZNF672Q499Z4 452 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-231ENST00000532463 ATP1A1-AS1Q5TC04 95 aa6.48□□□□□ -1.37
CTNND1-231ENST00000532463 CACNA1IQ9P0X4 2223 aa6.48□□□□□ -1.37
CTNND1-231ENST00000532463 A0A096LPF7 62 aa6.48□□□□□ -1.37
CTNND1-231ENST00000532463 CENPVL3A0A0U1RRI6 287 aa6.48□□□□□ -1.37
CTNND1-231ENST00000532463 PTH2Q96A98 100 aa6.48□□□□□ -1.37
CTNND1-231ENST00000532463 MRPL53Q96EL3 112 aaKnown RBP6.48□□□□□ -1.37
CTNND1-231ENST00000532463 KLF2Q9Y5W3 355 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-231ENST00000532463 MIA3Q5JRA6 1907 aa6.48□□□□□ -1.37
CTNND1-231ENST00000532463 OTOFQ9HC10 1997 aa6.48□□□□□ -1.37
CTNND1-231ENST00000532463 COX7A2LO14548 114 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms