RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	LY6G6C	O95867	125 aa		12.42	□□□□□ -0.42
CTSB-223	ENST00000532370	OR2G3	Q8NGZ4	309 aa		12.42	□□□□□ -0.42
CTSB-223	ENST00000532370		Q9H3A6	140 aa		12.42	□□□□□ -0.42
CTSB-223	ENST00000532370	DEFB131B	A0A096LNP1	70 aa		12.41	□□□□□ -0.42
CTSB-223	ENST00000532370	PLAC8L1	A1L4L8	177 aa		12.41	□□□□□ -0.42
CTSB-223	ENST00000532370	LEP	P41159	167 aa		12.41	□□□□□ -0.42
CTSB-223	ENST00000532370	TAS2R60	P59551	318 aa		12.41	□□□□□ -0.42
CTSB-223	ENST00000532370	TMEM256	Q8N2U0	113 aa		12.41	□□□□□ -0.42
CTSB-223	ENST00000532370	FAM19A4	Q96LR4	140 aa		12.41	□□□□□ -0.42
CTSB-223	ENST00000532370	ODF3	Q96PU9	254 aa		12.41	□□□□□ -0.42
CTSB-223	ENST00000532370	PSMG3	Q9BT73	122 aa	Predicted RBP	12.41	□□□□□ -0.42
CTSB-223	ENST00000532370	TRAV12-3	A0A0B4J271	114 aa		12.4	□□□□□ -0.42
CTSB-223	ENST00000532370	C1QB	P02746	253 aa		12.4	□□□□□ -0.42
CTSB-223	ENST00000532370	C9orf47	Q6ZRZ4	202 aa		12.4	□□□□□ -0.42
CTSB-223	ENST00000532370	LINC00477	Q96M19	166 aa		12.4	□□□□□ -0.42
CTSB-223	ENST00000532370	NIPSNAP3B	Q9BS92	247 aa		12.4	□□□□□ -0.42
CTSB-223	ENST00000532370		H7BYZ3	331 aa		12.39	□□□□□ -0.43
CTSB-223	ENST00000532370	CDC34	P49427	236 aa	Predicted RBP	12.39	□□□□□ -0.43
CTSB-223	ENST00000532370	CD300C	Q08708	224 aa		12.39	□□□□□ -0.43
CTSB-223	ENST00000532370	PQLC2	Q6ZP29	291 aa		12.39	□□□□□ -0.43
CTSB-223	ENST00000532370	LYPD1	Q8N2G4	141 aa		12.39	□□□□□ -0.43
CTSB-223	ENST00000532370	KCNRG	Q8N5I3	272 aa		12.39	□□□□□ -0.43
CTSB-223	ENST00000532370	RAB24	Q969Q5	203 aa		12.39	□□□□□ -0.43
CTSB-223	ENST00000532370	HYLS1	Q96M11	299 aa		12.39	□□□□□ -0.43
CTSB-223	ENST00000532370	APLN	Q9ULZ1	77 aa		12.39	□□□□□ -0.43
CTSB-223	ENST00000532370	BORCS7-ASMT	A0A0B4J1R7	106 aa		12.38	□□□□□ -0.43
CTSB-223	ENST00000532370	TAAR5	O14804	337 aa		12.38	□□□□□ -0.43
CTSB-223	ENST00000532370	ARL14EPL	P0DKL9	152 aa		12.38	□□□□□ -0.43
CTSB-223	ENST00000532370	SERF2	P84101	59 aa		12.38	□□□□□ -0.43
CTSB-223	ENST00000532370	BTN1A1	Q13410	526 aa		12.38	□□□□□ -0.43
CTSB-223	ENST00000532370		Q8TAT8	98 aa		12.38	□□□□□ -0.43
CTSB-223	ENST00000532370	CYTL1	Q9NRR1	136 aa		12.38	□□□□□ -0.43
CTSB-223	ENST00000532370	IGHV4-4	A0A075B6R2	117 aa		12.37	□□□□□ -0.43
CTSB-223	ENST00000532370		A0A0D9SG52	128 aa		12.37	□□□□□ -0.43
CTSB-223	ENST00000532370	TEX48	A0A1B0GUV7	120 aa		12.37	□□□□□ -0.43
CTSB-223	ENST00000532370	PGP	A6NDG6	321 aa		12.37	□□□□□ -0.43
CTSB-223	ENST00000532370	KLLN	B2CW77	178 aa		12.37	□□□□□ -0.43
CTSB-223	ENST00000532370	STAG3L2	P0CL84	134 aa		12.37	□□□□□ -0.43
CTSB-223	ENST00000532370	STAG3L3	P0CL85	134 aa		12.37	□□□□□ -0.43
CTSB-223	ENST00000532370	HTN3	P15516	51 aa		12.37	□□□□□ -0.43
CTSB-223	ENST00000532370	RNASE4	P34096	147 aa	Known RBP	12.37	□□□□□ -0.43
CTSB-223	ENST00000532370	CSN1S1	P47710	185 aa		12.37	□□□□□ -0.43
CTSB-223	ENST00000532370	TMEM78	Q5T7P6	136 aa		12.37	□□□□□ -0.43
CTSB-223	ENST00000532370	PRR9	Q5T870	116 aa		12.37	□□□□□ -0.43
CTSB-223	ENST00000532370		Q6ZQT7	251 aa		12.37	□□□□□ -0.43
CTSB-223	ENST00000532370	SSX7	Q7RTT5	188 aa		12.37	□□□□□ -0.43
CTSB-223	ENST00000532370	RNASE8	Q8TDE3	154 aa	Known RBP	12.37	□□□□□ -0.43
CTSB-223	ENST00000532370	GNPNAT1	Q96EK6	184 aa	Predicted RBP	12.37	□□□□□ -0.43
CTSB-223	ENST00000532370	C20orf144	Q9BQM9	153 aa		12.37	□□□□□ -0.43
CTSB-223	ENST00000532370	OTOR	Q9NRC9	128 aa		12.37	□□□□□ -0.43
CTSB-223	ENST00000532370	EPPK1	P58107	5090 aa	Known RBP	12.37	□□□□□ -0.43
CTSB-223	ENST00000532370	C7orf71	A4D174	169 aa		12.36	□□□□□ -0.43
CTSB-223	ENST00000532370	DIRC3	C9JPN6	131 aa		12.36	□□□□□ -0.43
CTSB-223	ENST00000532370	ZNF324	O75467	553 aa	Predicted RBP	12.36	□□□□□ -0.43
CTSB-223	ENST00000532370	MB	P02144	154 aa		12.36	□□□□□ -0.43
CTSB-223	ENST00000532370	SLC25A5	P05141	298 aa	Known RBP	12.36	□□□□□ -0.43
CTSB-223	ENST00000532370	DEFB130B	P0DP73	79 aa		12.36	□□□□□ -0.43
CTSB-223	ENST00000532370	DEFB130A	P0DP74	79 aa		12.36	□□□□□ -0.43
CTSB-223	ENST00000532370	DAD1	P61803	113 aa		12.36	□□□□□ -0.43
CTSB-223	ENST00000532370	ZFAND2A	Q8N6M9	145 aa		12.36	□□□□□ -0.43
CTSB-223	ENST00000532370	C16orf74	Q96GX8	76 aa		12.36	□□□□□ -0.43
CTSB-223	ENST00000532370	ZNF492	Q9P255	531 aa		12.36	□□□□□ -0.43
CTSB-223	ENST00000532370	DNAH6	Q9C0G6	4158 aa		12.36	□□□□□ -0.43
CTSB-223	ENST00000532370	LYRM9	A8MSI8	78 aa		12.35	□□□□□ -0.43
CTSB-223	ENST00000532370	CRISP2	P16562	243 aa		12.35	□□□□□ -0.43
CTSB-223	ENST00000532370	GCHFR	P30047	84 aa		12.35	□□□□□ -0.43
CTSB-223	ENST00000532370	ZNF138	P52744	262 aa		12.35	□□□□□ -0.43
CTSB-223	ENST00000532370	TMEM263	Q8WUH6	116 aa	Known RBP	12.35	□□□□□ -0.43
CTSB-223	ENST00000532370	ACTR3C	Q9C0K3	210 aa	Predicted RBP	12.35	□□□□□ -0.43
CTSB-223	ENST00000532370	NOP10	Q9NPE3	64 aa	Known RBP	12.35	□□□□□ -0.43
CTSB-223	ENST00000532370	RPH3AL	Q9UNE2	315 aa		12.35	□□□□□ -0.43
CTSB-223	ENST00000532370	GPX1	P07203	203 aa		12.34	□□□□□ -0.43
CTSB-223	ENST00000532370	TCTA	P57738	103 aa		12.34	□□□□□ -0.43
CTSB-223	ENST00000532370	ZNF726P1	Q15940	193 aa		12.34	□□□□□ -0.43
CTSB-223	ENST00000532370	LGALS9C	Q6DKI2	356 aa		12.34	□□□□□ -0.43
CTSB-223	ENST00000532370	RXFP4	Q8TDU9	374 aa		12.34	□□□□□ -0.43
CTSB-223	ENST00000532370	ARPC5L	Q9BPX5	153 aa		12.34	□□□□□ -0.43
CTSB-223	ENST00000532370	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	12.34	□□□□□ -0.43
CTSB-223	ENST00000532370	RBAKDN	A6NC62	111 aa		12.33	□□□□□ -0.44
CTSB-223	ENST00000532370	BCL2L11	O43521	198 aa		12.33	□□□□□ -0.44
CTSB-223	ENST00000532370	GNG5	P63218	68 aa		12.33	□□□□□ -0.44
CTSB-223	ENST00000532370	ZNF493	Q6ZR52	646 aa		12.33	□□□□□ -0.44
CTSB-223	ENST00000532370	CCDC28A	Q8IWP9	274 aa		12.33	□□□□□ -0.44
CTSB-223	ENST00000532370	CMTM2	Q8TAZ6	248 aa		12.33	□□□□□ -0.44
CTSB-223	ENST00000532370	SUN5	Q8TC36	379 aa		12.33	□□□□□ -0.44
CTSB-223	ENST00000532370	PYGO2	Q9BRQ0	406 aa		12.33	□□□□□ -0.44
CTSB-223	ENST00000532370	NMB	P08949	121 aa		12.32	□□□□□ -0.44
CTSB-223	ENST00000532370	LGALSL	Q3ZCW2	172 aa	Predicted RBP	12.32	□□□□□ -0.44
CTSB-223	ENST00000532370	ZFP69	Q49AA0	526 aa		12.32	□□□□□ -0.44
CTSB-223	ENST00000532370	GOLT1A	Q6ZVE7	132 aa		12.32	□□□□□ -0.44
CTSB-223	ENST00000532370	TMUB2	Q71RG4	321 aa		12.32	□□□□□ -0.44
CTSB-223	ENST00000532370	CXorf1	O96002	111 aa		12.31	□□□□□ -0.44
CTSB-223	ENST00000532370	FAM74A1	Q5RGS3	127 aa		12.31	□□□□□ -0.44
CTSB-223	ENST00000532370	NDUFAF3	Q9BU61	184 aa		12.31	□□□□□ -0.44
CTSB-223	ENST00000532370	TP53TG3	Q9ULZ0	132 aa		12.31	□□□□□ -0.44
CTSB-223	ENST00000532370	DNAH10	Q8IVF4	4471 aa		12.31	□□□□□ -0.44
CTSB-223	ENST00000532370	TRAV8-1	A0A0A6YYK1	113 aa		12.3	□□□□□ -0.44
CTSB-223	ENST00000532370	KANTR	A0A1W2PQU2	76 aa		12.3	□□□□□ -0.44
CTSB-223	ENST00000532370	AKR1C8P	Q5T2L2	129 aa		12.3	□□□□□ -0.44
CTSB-223	ENST00000532370	IQCF2	Q8IXL9	164 aa		12.3	□□□□□ -0.44

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