RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 VPS13DQ5THJ4 4388 aa16.3■□□□□ 0.2
CAPN1-222ENST00000532285 IGKV2-40A0A087WW87 121 aaPredicted RBP16.3■□□□□ 0.2
CAPN1-222ENST00000532285 IGKV2D-40P01614 121 aaPredicted RBP16.3■□□□□ 0.2
CAPN1-222ENST00000532285 HTN3P15516 51 aa16.3■□□□□ 0.2
CAPN1-222ENST00000532285 CSN1S1P47710 185 aa16.3■□□□□ 0.2
CAPN1-222ENST00000532285 RAB2AP61019 212 aa16.3■□□□□ 0.2
CAPN1-222ENST00000532285 PQLC2Q6ZP29 291 aa16.3■□□□□ 0.2
CAPN1-222ENST00000532285 HSD17B11Q8NBQ5 300 aa16.3■□□□□ 0.2
CAPN1-222ENST00000532285 OR10G4Q8NGN3 311 aa16.3■□□□□ 0.2
CAPN1-222ENST00000532285 OR10G9Q8NGN4 311 aa16.3■□□□□ 0.2
CAPN1-222ENST00000532285 OR10G7Q8NGN6 311 aa16.3■□□□□ 0.2
CAPN1-222ENST00000532285 OR2T35Q8NGX2 323 aa16.3■□□□□ 0.2
CAPN1-222ENST00000532285 OR2G3Q8NGZ4 309 aa16.3■□□□□ 0.2
CAPN1-222ENST00000532285 RNASE8Q8TDE3 154 aaKnown RBP16.3■□□□□ 0.2
CAPN1-222ENST00000532285 Q9H3A6 140 aa16.3■□□□□ 0.2
CAPN1-222ENST00000532285 KMT2AQ03164 3969 aa16.29■□□□□ 0.2
CAPN1-222ENST00000532285 FXYD6-FXYD2A0A087WZ82 144 aa16.29■□□□□ 0.2
CAPN1-222ENST00000532285 KLLNB2CW77 178 aa16.29■□□□□ 0.2
CAPN1-222ENST00000532285 NMBP08949 121 aa16.29■□□□□ 0.2
CAPN1-222ENST00000532285 VGLL1Q99990 258 aa16.29■□□□□ 0.2
CAPN1-222ENST00000532285 PSMG3Q9BT73 122 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-222ENST00000532285 C7orf71A4D174 169 aa16.28■□□□□ 0.2
CAPN1-222ENST00000532285 DEFB130BP0DP73 79 aa16.28■□□□□ 0.2
CAPN1-222ENST00000532285 DEFB130AP0DP74 79 aa16.28■□□□□ 0.2
CAPN1-222ENST00000532285 CRISP2P16562 243 aa16.28■□□□□ 0.2
CAPN1-222ENST00000532285 PYGO2Q9BRQ0 406 aa16.28■□□□□ 0.2
CAPN1-222ENST00000532285 TNFSF18Q9UNG2 199 aa16.28■□□□□ 0.2
CAPN1-222ENST00000532285 GPX1P07203 203 aa16.27■□□□□ 0.2
CAPN1-222ENST00000532285 ATP6V0CP27449 155 aa16.27■□□□□ 0.2
CAPN1-222ENST00000532285 SERF2P84101 59 aa16.27■□□□□ 0.2
CAPN1-222ENST00000532285 ZNF492Q9P255 531 aa16.27■□□□□ 0.2
CAPN1-222ENST00000532285 RBAKDNA6NC62 111 aa16.26■□□□□ 0.19
CAPN1-222ENST00000532285 RNF222A6NCQ9 220 aa16.26■□□□□ 0.19
CAPN1-222ENST00000532285 EIF3GO75821 320 aaKnown RBP eCLIP16.26■□□□□ 0.19
CAPN1-222ENST00000532285 MBP02144 154 aa16.26■□□□□ 0.19
CAPN1-222ENST00000532285 RXFP4Q8TDU9 374 aa16.26■□□□□ 0.19
CAPN1-222ENST00000532285 NOP10Q9NPE3 64 aaKnown RBP16.26■□□□□ 0.19
CAPN1-222ENST00000532285 OTORQ9NRC9 128 aa16.26■□□□□ 0.19
CAPN1-222ENST00000532285 CBY3A6NI87 242 aa16.25■□□□□ 0.19
CAPN1-222ENST00000532285 ZNF324O75467 553 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-222ENST00000532285 P0DMU3 169 aa16.25■□□□□ 0.19
CAPN1-222ENST00000532285 FAM231AP0DMU4 169 aa16.25■□□□□ 0.19
CAPN1-222ENST00000532285 FAM231CP0DMU5 169 aa16.25■□□□□ 0.19
CAPN1-222ENST00000532285 RNASE4P34096 147 aaKnown RBP16.25■□□□□ 0.19
CAPN1-222ENST00000532285 CDC34P49427 236 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-222ENST00000532285 ZNF138P52744 262 aa16.25■□□□□ 0.19
CAPN1-222ENST00000532285 CD300CQ08708 224 aa16.25■□□□□ 0.19
CAPN1-222ENST00000532285 BORCS7-ASMTA0A0B4J1R7 106 aa16.24■□□□□ 0.19
CAPN1-222ENST00000532285 TRBV7-9A0A0J9YWB2 115 aa16.24■□□□□ 0.19
CAPN1-222ENST00000532285 BTN1A1Q13410 526 aa16.24■□□□□ 0.19
CAPN1-222ENST00000532285 FAM74A1Q5RGS3 127 aa16.24■□□□□ 0.19
CAPN1-222ENST00000532285 ZFAND2AQ8N6M9 145 aa16.24■□□□□ 0.19
CAPN1-222ENST00000532285 PGPA6NDG6 321 aa16.23■□□□□ 0.19
CAPN1-222ENST00000532285 SNURFLB1AK76 121 aa16.23■□□□□ 0.19
CAPN1-222ENST00000532285 DIRC3C9JPN6 131 aa16.23■□□□□ 0.19
CAPN1-222ENST00000532285 HMGB3O15347 200 aaKnown RBP16.23■□□□□ 0.19
CAPN1-222ENST00000532285 ATP5G1P05496 136 aa16.23■□□□□ 0.19
CAPN1-222ENST00000532285 ATP5G3P48201 142 aa16.23■□□□□ 0.19
CAPN1-222ENST00000532285 TMEM88Q6PEY1 159 aa16.23■□□□□ 0.19
CAPN1-222ENST00000532285 GNPNAT1Q96EK6 184 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-222ENST00000532285 LINC00467Q9BRT7 94 aa16.23■□□□□ 0.19
CAPN1-222ENST00000532285 G3V3Q6 166 aa16.22■□□□□ 0.19
CAPN1-222ENST00000532285 RPL7L1Q6DKI1 246 aaKnown RBP16.22■□□□□ 0.19
CAPN1-222ENST00000532285 ARL6IP6Q8N6S5 226 aa16.22■□□□□ 0.19
CAPN1-222ENST00000532285 CMTM2Q8TAZ6 248 aa16.22■□□□□ 0.19
CAPN1-222ENST00000532285 RAB24Q969Q5 203 aa16.22■□□□□ 0.19
CAPN1-222ENST00000532285 HYLS1Q96M11 299 aa16.22■□□□□ 0.19
CAPN1-222ENST00000532285 SH3BGRL3Q9H299 93 aa16.22■□□□□ 0.19
CAPN1-222ENST00000532285 STAG3L2P0CL84 134 aa16.21■□□□□ 0.19
CAPN1-222ENST00000532285 STAG3L3P0CL85 134 aa16.21■□□□□ 0.19
CAPN1-222ENST00000532285 ARL14EPLP0DKL9 152 aa16.21■□□□□ 0.19
CAPN1-222ENST00000532285 EIF4E3Q8N5X7 224 aaKnown RBP16.21■□□□□ 0.19
CAPN1-222ENST00000532285 POM121L12Q8N7R1 296 aa16.21■□□□□ 0.19
CAPN1-222ENST00000532285 ZNF680Q8NEM1 530 aa16.21■□□□□ 0.19
CAPN1-222ENST00000532285 Q8TAT8 98 aa16.21■□□□□ 0.19
CAPN1-222ENST00000532285 F5H768 121 aa16.2■□□□□ 0.18
CAPN1-222ENST00000532285 ANXA2RQ3ZCQ2 193 aa16.2■□□□□ 0.18
CAPN1-222ENST00000532285 PRR9Q5T870 116 aa16.2■□□□□ 0.18
CAPN1-222ENST00000532285 LINC00612Q8N6U2 182 aa16.2■□□□□ 0.18
CAPN1-222ENST00000532285 C15orf53Q8NAA6 179 aa16.2■□□□□ 0.18
CAPN1-222ENST00000532285 LENEPQ9Y5L5 61 aa16.2■□□□□ 0.18
CAPN1-222ENST00000532285 TAAR5O14804 337 aa16.19■□□□□ 0.18
CAPN1-222ENST00000532285 DAZ2Q13117 558 aaKnown RBP16.19■□□□□ 0.18
CAPN1-222ENST00000532285 TMED6Q8WW62 240 aa16.19■□□□□ 0.18
CAPN1-222ENST00000532285 ACTR3CQ9C0K3 210 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-222ENST00000532285 RGS13O14921 159 aa16.18■□□□□ 0.18
CAPN1-222ENST00000532285 ARPC5O15511 151 aa16.18■□□□□ 0.18
CAPN1-222ENST00000532285 SUN5Q8TC36 379 aa16.18■□□□□ 0.18
CAPN1-222ENST00000532285 DNAH6Q9C0G6 4158 aa16.18■□□□□ 0.18
CAPN1-222ENST00000532285 CXorf1O96002 111 aa16.17■□□□□ 0.18
CAPN1-222ENST00000532285 GCHFRP30047 84 aa16.17■□□□□ 0.18
CAPN1-222ENST00000532285 GSN-AS1Q9NRJ2 163 aa16.17■□□□□ 0.18
CAPN1-222ENST00000532285 RPH3ALQ9UNE2 315 aa16.17■□□□□ 0.18
CAPN1-222ENST00000532285 IGHV1OR15-1A0A075B7D0 117 aa16.16■□□□□ 0.18
CAPN1-222ENST00000532285 C11orf72Q8NBR9 251 aa16.16■□□□□ 0.18
CAPN1-222ENST00000532285 ST6GAL2Q96JF0 529 aa16.16■□□□□ 0.18
CAPN1-222ENST00000532285 TMEM167BQ9NRX6 74 aa16.16■□□□□ 0.18
CAPN1-222ENST00000532285 EPPK1P58107 5090 aaKnown RBP16.16■□□□□ 0.18
CAPN1-222ENST00000532285 GAGE12BA1L429 117 aa16.15■□□□□ 0.18
CAPN1-222ENST00000532285 GAGE7O76087 117 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms