RNA–Protein interactions for RNA: ENST00000531657.1

PPFIA1-219, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 2

Gene PPFIA1, Length 3,036 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-219ENST00000531657 ARL3P36405 182 aa7.41□□□□□ -1.22
PPFIA1-219ENST00000531657 HINT1P49773 126 aaPredicted RBP7.41□□□□□ -1.22
PPFIA1-219ENST00000531657 LOXL1Q08397 574 aaPredicted RBP7.41□□□□□ -1.22
PPFIA1-219ENST00000531657 CCDC140Q96MF4 163 aa7.41□□□□□ -1.22
PPFIA1-219ENST00000531657 MRPL27Q9P0M9 148 aaKnown RBP7.41□□□□□ -1.22
PPFIA1-219ENST00000531657 SMIM27A0A1W2PRY6 76 aa7.41□□□□□ -1.22
PPFIA1-219ENST00000531657 H3BRN7 92 aa7.41□□□□□ -1.22
PPFIA1-219ENST00000531657 HAX1O00165 279 aa7.41□□□□□ -1.22
PPFIA1-219ENST00000531657 GOSR1O95249 250 aa7.41□□□□□ -1.22
PPFIA1-219ENST00000531657 TOMM40O96008 361 aa7.41□□□□□ -1.22
PPFIA1-219ENST00000531657 GPX1P07203 203 aa7.41□□□□□ -1.22
PPFIA1-219ENST00000531657 FOXE3Q13461 319 aa7.41□□□□□ -1.22
PPFIA1-219ENST00000531657 OR4B1Q8NGF8 309 aa7.41□□□□□ -1.22
PPFIA1-219ENST00000531657 MBD6Q96DN6 1003 aa7.41□□□□□ -1.22
PPFIA1-219ENST00000531657 D6R8Y8 96 aa7.4□□□□□ -1.22
PPFIA1-219ENST00000531657 ZNF324O75467 553 aaPredicted RBP7.4□□□□□ -1.22
PPFIA1-219ENST00000531657 WDR73Q6P4I2 378 aa7.4□□□□□ -1.22
PPFIA1-219ENST00000531657 Q6ZN92 141 aa7.4□□□□□ -1.22
PPFIA1-219ENST00000531657 GNB1LQ9BYB4 327 aa7.4□□□□□ -1.22
PPFIA1-219ENST00000531657 SMAD5-AS1Q9Y6J3 95 aa7.4□□□□□ -1.22
PPFIA1-219ENST00000531657 IGHV1-69DA0A0B4J2H0 117 aa7.4□□□□□ -1.23
PPFIA1-219ENST00000531657 FAM181BA6NEQ2 426 aa7.4□□□□□ -1.23
PPFIA1-219ENST00000531657 IGHV1-69P01742 117 aa7.4□□□□□ -1.23
PPFIA1-219ENST00000531657 YPEL3P61236 119 aaPredicted RBP7.4□□□□□ -1.23
PPFIA1-219ENST00000531657 PSG3Q16557 428 aa7.4□□□□□ -1.23
PPFIA1-219ENST00000531657 FMC1Q96HJ9 113 aa7.4□□□□□ -1.23
PPFIA1-219ENST00000531657 SETXQ7Z333 2677 aaKnown RBP7.39□□□□□ -1.23
PPFIA1-219ENST00000531657 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.39□□□□□ -1.23
PPFIA1-219ENST00000531657 FNDC10F2Z333 226 aa7.39□□□□□ -1.23
PPFIA1-219ENST00000531657 PRM2P04554 102 aa7.39□□□□□ -1.23
PPFIA1-219ENST00000531657 RPL7P18124 248 aaKnown RBP7.39□□□□□ -1.23
PPFIA1-219ENST00000531657 DEFB112Q30KQ8 113 aa7.39□□□□□ -1.23
PPFIA1-219ENST00000531657 IGLV2-11P01706 119 aa7.39□□□□□ -1.23
PPFIA1-219ENST00000531657 IGLC2P0DOY2 106 aa7.39□□□□□ -1.23
PPFIA1-219ENST00000531657 COX6B1P14854 86 aa7.39□□□□□ -1.23
PPFIA1-219ENST00000531657 ATP5IP56385 69 aaPredicted RBP7.39□□□□□ -1.23
PPFIA1-219ENST00000531657 EBLN2Q6P2I7 272 aa7.39□□□□□ -1.23
PPFIA1-219ENST00000531657 RBPMS2Q6ZRY4 209 aaKnown RBP7.39□□□□□ -1.23
PPFIA1-219ENST00000531657 C8orf31Q8N9H6 132 aa7.39□□□□□ -1.23
PPFIA1-219ENST00000531657 METTL26Q96S19 204 aa7.39□□□□□ -1.23
PPFIA1-219ENST00000531657 SPOCK3Q9BQ16 436 aa7.39□□□□□ -1.23
PPFIA1-219ENST00000531657 A0A1B0GUT8 65 aa7.38□□□□□ -1.23
PPFIA1-219ENST00000531657 NDUFA3O95167 84 aa7.38□□□□□ -1.23
PPFIA1-219ENST00000531657 LTAP01374 205 aa7.38□□□□□ -1.23
PPFIA1-219ENST00000531657 MSMBP08118 114 aa7.38□□□□□ -1.23
PPFIA1-219ENST00000531657 IFI27P40305 119 aaPredicted RBP7.38□□□□□ -1.23
PPFIA1-219ENST00000531657 PVRIGQ6DKI7 326 aa7.38□□□□□ -1.23
PPFIA1-219ENST00000531657 SPATA12Q7Z6I5 190 aa7.38□□□□□ -1.23
PPFIA1-219ENST00000531657 TRAV12-2A0A075B6T6 113 aa7.38□□□□□ -1.23
PPFIA1-219ENST00000531657 H3BVH4 76 aa7.38□□□□□ -1.23
PPFIA1-219ENST00000531657 ZNF688P0C7X2 276 aa7.38□□□□□ -1.23
PPFIA1-219ENST00000531657 S100A4P26447 101 aaKnown RBP7.38□□□□□ -1.23
PPFIA1-219ENST00000531657 PAX8Q06710 450 aa7.38□□□□□ -1.23
PPFIA1-219ENST00000531657 NPBQ8NG41 125 aa7.38□□□□□ -1.23
PPFIA1-219ENST00000531657 CKS2P33552 79 aa7.38□□□□□ -1.23
PPFIA1-219ENST00000531657 RNASE4P34096 147 aaKnown RBP7.38□□□□□ -1.23
PPFIA1-219ENST00000531657 TMEM249Q2WGJ8 235 aa7.38□□□□□ -1.23
PPFIA1-219ENST00000531657 FA2HQ7L5A8 372 aa7.38□□□□□ -1.23
PPFIA1-219ENST00000531657 NEGR1Q7Z3B1 354 aa7.38□□□□□ -1.23
PPFIA1-219ENST00000531657 C5orf56Q8N8D9 126 aa7.38□□□□□ -1.23
PPFIA1-219ENST00000531657 OR4X2Q8NGF9 303 aa7.38□□□□□ -1.23
PPFIA1-219ENST00000531657 ALKBH7Q9BT30 221 aaPredicted RBP7.38□□□□□ -1.23
PPFIA1-219ENST00000531657 A8MWP6 167 aa7.37□□□□□ -1.23
PPFIA1-219ENST00000531657 LEPROTL1O95214 131 aa7.37□□□□□ -1.23
PPFIA1-219ENST00000531657 MGPP08493 103 aa7.37□□□□□ -1.23
PPFIA1-219ENST00000531657 SFTPCP11686 197 aa7.37□□□□□ -1.23
PPFIA1-219ENST00000531657 MYCNOSP40205 109 aa7.37□□□□□ -1.23
PPFIA1-219ENST00000531657 C1orf122Q6ZSJ8 110 aa7.37□□□□□ -1.23
PPFIA1-219ENST00000531657 EEF1AKMT3Q96AZ1 226 aa7.37□□□□□ -1.23
PPFIA1-219ENST00000531657 NAA38Q9BRA0 125 aaKnown RBP7.37□□□□□ -1.23
PPFIA1-219ENST00000531657 PCP4P48539 62 aa7.37□□□□□ -1.23
PPFIA1-219ENST00000531657 PRSS57Q6UWY2 283 aa7.37□□□□□ -1.23
PPFIA1-219ENST00000531657 C18orf65Q6ZTR6 163 aa7.37□□□□□ -1.23
PPFIA1-219ENST00000531657 TTC9CQ8N5M4 171 aa7.37□□□□□ -1.23
PPFIA1-219ENST00000531657 C10orf105Q8TEF2 133 aa7.37□□□□□ -1.23
PPFIA1-219ENST00000531657 AJUBAQ96IF1 538 aa7.37□□□□□ -1.23
PPFIA1-219ENST00000531657 SNHG12Q9BXW3 62 aa7.37□□□□□ -1.23
PPFIA1-219ENST00000531657 PPP1R14DQ9NXH3 145 aa7.37□□□□□ -1.23
PPFIA1-219ENST00000531657 K7EMI3 77 aa7.36□□□□□ -1.23
PPFIA1-219ENST00000531657 OR5AL1P0C617 328 aa7.36□□□□□ -1.23
PPFIA1-219ENST00000531657 TMEM78Q5T7P6 136 aa7.36□□□□□ -1.23
PPFIA1-219ENST00000531657 FAM74A4Q5TZK3 123 aa7.36□□□□□ -1.23
PPFIA1-219ENST00000531657 C8orf86Q6ZUL3 223 aa7.36□□□□□ -1.23
PPFIA1-219ENST00000531657 OR10AG1Q8NH19 301 aa7.36□□□□□ -1.23
PPFIA1-219ENST00000531657 SYNJ2BPP57105 145 aa7.36□□□□□ -1.23
PPFIA1-219ENST00000531657 MINOS1Q5TGZ0 78 aa7.36□□□□□ -1.23
PPFIA1-219ENST00000531657 SPANXN1Q5VSR9 72 aa7.36□□□□□ -1.23
PPFIA1-219ENST00000531657 PRR25Q96S07 402 aa7.36□□□□□ -1.23
PPFIA1-219ENST00000531657 MLST8Q9BVC4 326 aa7.36□□□□□ -1.23
PPFIA1-219ENST00000531657 MOB4Q9Y3A3 225 aa7.36□□□□□ -1.23
PPFIA1-219ENST00000531657 MINOS1-NBL1R4GNA1 71 aa7.36□□□□□ -1.23
PPFIA1-219ENST00000531657 MT-ND6P03923 174 aa7.35□□□□□ -1.23
PPFIA1-219ENST00000531657 RPLP1P05386 114 aaKnown RBP7.35□□□□□ -1.23
PPFIA1-219ENST00000531657 PAX2Q02962 417 aa7.35□□□□□ -1.23
PPFIA1-219ENST00000531657 ZNF502Q8TBZ5 544 aa7.35□□□□□ -1.23
PPFIA1-219ENST00000531657 NDFIP1Q9BT67 221 aa7.35□□□□□ -1.23
PPFIA1-219ENST00000531657 AGPAT4-IT1Q9H0P7 198 aa7.35□□□□□ -1.23
PPFIA1-219ENST00000531657 IGHV3OR16-12A0A075B7B8 117 aa7.35□□□□□ -1.23
PPFIA1-219ENST00000531657 FAM162BQ5T6X4 162 aa7.35□□□□□ -1.23
PPFIA1-219ENST00000531657 FER1L6-AS1Q8NA97 138 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms