RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 ZNF253O75346 499 aa12.99□□□□□ -0.33
SCN4B-205ENST00000531550 IFNA1P01562 189 aa12.99□□□□□ -0.33
SCN4B-205ENST00000531550 P0DMU3 169 aa12.99□□□□□ -0.33
SCN4B-205ENST00000531550 FAM231AP0DMU4 169 aa12.99□□□□□ -0.33
SCN4B-205ENST00000531550 FAM231CP0DMU5 169 aa12.99□□□□□ -0.33
SCN4B-205ENST00000531550 TAGLN2P37802 199 aaKnown RBP12.99□□□□□ -0.33
SCN4B-205ENST00000531550 TRPT1Q86TN4 253 aaKnown RBP12.99□□□□□ -0.33
SCN4B-205ENST00000531550 C17orf77Q96MU5 243 aa12.99□□□□□ -0.33
SCN4B-205ENST00000531550 TRBV19A0A075B6N1 114 aa12.98□□□□□ -0.33
SCN4B-205ENST00000531550 MORN3Q6PF18 240 aaPredicted RBP12.98□□□□□ -0.33
SCN4B-205ENST00000531550 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.98□□□□□ -0.33
SCN4B-205ENST00000531550 LYPD1Q8N2G4 141 aa12.98□□□□□ -0.33
SCN4B-205ENST00000531550 FAM210AQ96ND0 272 aa12.98□□□□□ -0.33
SCN4B-205ENST00000531550 TXNDC17Q9BRA2 123 aa12.98□□□□□ -0.33
SCN4B-205ENST00000531550 GNG13Q9P2W3 67 aa12.98□□□□□ -0.33
SCN4B-205ENST00000531550 CELA1Q9UNI1 258 aa12.98□□□□□ -0.33
SCN4B-205ENST00000531550 DEFB131BA0A096LNP1 70 aa12.97□□□□□ -0.33
SCN4B-205ENST00000531550 RAB19A4D1S5 217 aa12.97□□□□□ -0.33
SCN4B-205ENST00000531550 RPL11P62913 178 aaKnown RBP12.97□□□□□ -0.33
SCN4B-205ENST00000531550 BLNKQ8WV28 456 aa12.97□□□□□ -0.33
SCN4B-205ENST00000531550 NKX6-2Q9C056 277 aaPredicted RBP12.97□□□□□ -0.33
SCN4B-205ENST00000531550 NRN1Q9NPD7 142 aa12.97□□□□□ -0.33
SCN4B-205ENST00000531550 RBFOX3A6NFN3 312 aa12.96□□□□□ -0.33
SCN4B-205ENST00000531550 FAM74A7A6NL05 159 aa12.96□□□□□ -0.33
SCN4B-205ENST00000531550 PAGE4O60829 102 aa12.96□□□□□ -0.33
SCN4B-205ENST00000531550 NDUFS6O75380 124 aaKnown RBP12.96□□□□□ -0.33
SCN4B-205ENST00000531550 NDUFB4O95168 129 aa12.96□□□□□ -0.33
SCN4B-205ENST00000531550 BCL2P10415 239 aa12.96□□□□□ -0.33
SCN4B-205ENST00000531550 PSG9Q00887 426 aa12.96□□□□□ -0.33
SCN4B-205ENST00000531550 C12orf74Q32Q52 190 aa12.96□□□□□ -0.33
SCN4B-205ENST00000531550 LGALS9BQ3B8N2 356 aa12.96□□□□□ -0.33
SCN4B-205ENST00000531550 SAMD13Q5VXD3 122 aa12.96□□□□□ -0.33
SCN4B-205ENST00000531550 ZNF575Q86XF7 245 aa12.96□□□□□ -0.33
SCN4B-205ENST00000531550 SLC50A1Q9BRV3 221 aa12.96□□□□□ -0.33
SCN4B-205ENST00000531550 NDUFAF3Q9BU61 184 aa12.96□□□□□ -0.33
SCN4B-205ENST00000531550 CLEC5AQ9NY25 188 aa12.96□□□□□ -0.33
SCN4B-205ENST00000531550 LOC102723971A0A1B0GUV8 181 aa12.95□□□□□ -0.34
SCN4B-205ENST00000531550 SNRPCP09234 159 aaKnown RBP12.95□□□□□ -0.34
SCN4B-205ENST00000531550 ZNF506Q5JVG8 444 aa12.95□□□□□ -0.34
SCN4B-205ENST00000531550 SMDT1Q9H4I9 107 aa12.95□□□□□ -0.34
SCN4B-205ENST00000531550 ZNF331Q9NQX6 463 aaPredicted RBP12.95□□□□□ -0.34
SCN4B-205ENST00000531550 VAX2Q9UIW0 290 aa12.95□□□□□ -0.34
SCN4B-205ENST00000531550 YTHDF2Q9Y5A9 579 aaKnown RBP12.95□□□□□ -0.34
SCN4B-205ENST00000531550 KNCNA6PVL3 124 aa12.94□□□□□ -0.34
SCN4B-205ENST00000531550 H3BTX0 84 aa12.94□□□□□ -0.34
SCN4B-205ENST00000531550 UBE2G2P60604 165 aa12.94□□□□□ -0.34
SCN4B-205ENST00000531550 RANP62826 216 aaKnown RBP12.94□□□□□ -0.34
SCN4B-205ENST00000531550 NDUFA5Q16718 116 aa12.94□□□□□ -0.34
SCN4B-205ENST00000531550 CSNK1G2-AS1Q8NCQ2 148 aa12.94□□□□□ -0.34
SCN4B-205ENST00000531550 OTORQ9NRC9 128 aa12.94□□□□□ -0.34
SCN4B-205ENST00000531550 K7EQG2 157 aa12.93□□□□□ -0.34
SCN4B-205ENST00000531550 SLC17A3O00476 420 aa12.93□□□□□ -0.34
SCN4B-205ENST00000531550 SOCS3O14543 225 aa12.93□□□□□ -0.34
SCN4B-205ENST00000531550 SUMO1P63165 101 aaKnown RBP12.93□□□□□ -0.34
SCN4B-205ENST00000531550 ICAM4Q14773 271 aa12.93□□□□□ -0.34
SCN4B-205ENST00000531550 TOR2AQ5JU69 321 aa12.93□□□□□ -0.34
SCN4B-205ENST00000531550 CST9LP1Q5W188 147 aa12.93□□□□□ -0.34
SCN4B-205ENST00000531550 CCDC28AQ8IWP9 274 aa12.93□□□□□ -0.34
SCN4B-205ENST00000531550 EIF4E3Q8N5X7 224 aaKnown RBP12.93□□□□□ -0.34
SCN4B-205ENST00000531550 ARL6IP6Q8N6S5 226 aa12.93□□□□□ -0.34
SCN4B-205ENST00000531550 DCANP1Q8TF63 244 aa12.93□□□□□ -0.34
SCN4B-205ENST00000531550 EIF5A2Q9GZV4 153 aaKnown RBP12.93□□□□□ -0.34
SCN4B-205ENST00000531550 Q9H3A6 140 aa12.93□□□□□ -0.34
SCN4B-205ENST00000531550 AAMDCQ9H7C9 122 aa12.93□□□□□ -0.34
SCN4B-205ENST00000531550 PRELID1Q9Y255 219 aa12.93□□□□□ -0.34
SCN4B-205ENST00000531550 AGRNO00468 2067 aa12.93□□□□□ -0.34
SCN4B-205ENST00000531550 PGPA6NDG6 321 aa12.92□□□□□ -0.34
SCN4B-205ENST00000531550 ISLRO14498 428 aa12.92□□□□□ -0.34
SCN4B-205ENST00000531550 ZNF688P0C7X2 276 aa12.92□□□□□ -0.34
SCN4B-205ENST00000531550 MEF2BQ02080 365 aaPredicted RBP12.92□□□□□ -0.34
SCN4B-205ENST00000531550 PEA15Q15121 130 aa12.92□□□□□ -0.34
SCN4B-205ENST00000531550 COMMD7Q86VX2 200 aa12.92□□□□□ -0.34
SCN4B-205ENST00000531550 C16orf92Q96LL3 132 aa12.92□□□□□ -0.34
SCN4B-205ENST00000531550 TCEAL7Q9BRU2 100 aa12.92□□□□□ -0.34
SCN4B-205ENST00000531550 TRAV8-2A0A0B4J237 113 aa12.91□□□□□ -0.34
SCN4B-205ENST00000531550 GGTLC3B5MD39 225 aa12.91□□□□□ -0.34
SCN4B-205ENST00000531550 ACTL10Q5JWF8 245 aa12.91□□□□□ -0.34
SCN4B-205ENST00000531550 UQCC3Q6UW78 93 aa12.91□□□□□ -0.34
SCN4B-205ENST00000531550 Q6ZR54 194 aa12.91□□□□□ -0.34
SCN4B-205ENST00000531550 MRPL53Q96EL3 112 aaKnown RBP12.91□□□□□ -0.34
SCN4B-205ENST00000531550 IGLV2-18A0A075B6J9 118 aa12.9□□□□□ -0.34
SCN4B-205ENST00000531550 ID1P41134 155 aa12.9□□□□□ -0.34
SCN4B-205ENST00000531550 ATP5G3P48201 142 aa12.9□□□□□ -0.34
SCN4B-205ENST00000531550 EXOC3-AS1Q8N2X6 119 aa12.9□□□□□ -0.34
SCN4B-205ENST00000531550 C5orf17Q8NAS9 161 aa12.9□□□□□ -0.34
SCN4B-205ENST00000531550 RXFP4Q8TDU9 374 aa12.9□□□□□ -0.34
SCN4B-205ENST00000531550 F6UZH7 168 aa12.89□□□□□ -0.35
SCN4B-205ENST00000531550 PDE6DO43924 150 aa12.89□□□□□ -0.35
SCN4B-205ENST00000531550 SRSF3P84103 164 aaKnown RBP12.89□□□□□ -0.35
SCN4B-205ENST00000531550 PSG3Q16557 428 aa12.89□□□□□ -0.35
SCN4B-205ENST00000531550 EPDR1Q9UM22 224 aa12.89□□□□□ -0.35
SCN4B-205ENST00000531550 TMEM250H0YL14 139 aa12.88□□□□□ -0.35
SCN4B-205ENST00000531550 SLC25A5P05141 298 aaKnown RBP12.88□□□□□ -0.35
SCN4B-205ENST00000531550 UBE2DNLQ8IWF7 75 aa12.88□□□□□ -0.35
SCN4B-205ENST00000531550 CMTM2Q8TAZ6 248 aa12.88□□□□□ -0.35
SCN4B-205ENST00000531550 HIST1H2BAQ96A08 127 aa12.88□□□□□ -0.35
SCN4B-205ENST00000531550 SRP19P09132 144 aaKnown RBP12.87□□□□□ -0.35
SCN4B-205ENST00000531550 CSN1S1P47710 185 aa12.87□□□□□ -0.35
SCN4B-205ENST00000531550 SNRPD3P62318 126 aaKnown RBP12.87□□□□□ -0.35
SCN4B-205ENST00000531550 SOHLH1Q5JUK2 328 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms