RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 GAGE12IP0CL82 117 aa9.24□□□□□ -0.93
AMBRA1-210ENST00000531542 C9orf47Q6ZRZ4 202 aa9.24□□□□□ -0.93
AMBRA1-210ENST00000531542 C11orf72Q8NBR9 251 aa9.24□□□□□ -0.93
AMBRA1-210ENST00000531542 TRBV7-9A0A0J9YWB2 115 aa9.23□□□□□ -0.93
AMBRA1-210ENST00000531542 C7orf71A4D174 169 aa9.23□□□□□ -0.93
AMBRA1-210ENST00000531542 M0R3E3 92 aa9.23□□□□□ -0.93
AMBRA1-210ENST00000531542 S100A10P60903 97 aa9.23□□□□□ -0.93
AMBRA1-210ENST00000531542 NPCDR1Q9BY65 106 aa9.23□□□□□ -0.93
AMBRA1-210ENST00000531542 AGPAT4-IT1Q9H0P7 198 aa9.23□□□□□ -0.93
AMBRA1-210ENST00000531542 MRPS16Q9Y3D3 137 aaKnown RBP9.23□□□□□ -0.93
AMBRA1-210ENST00000531542 TIMM9Q9Y5J7 89 aa9.23□□□□□ -0.93
AMBRA1-210ENST00000531542 FAM240BA0A1B0GVZ2 78 aa9.22□□□□□ -0.93
AMBRA1-210ENST00000531542 C16orf90A8MZG2 172 aa9.22□□□□□ -0.93
AMBRA1-210ENST00000531542 FGF7P21781 194 aa9.22□□□□□ -0.93
AMBRA1-210ENST00000531542 ASAH1Q13510 395 aa9.22□□□□□ -0.93
AMBRA1-210ENST00000531542 ESRGQ1W209 222 aa9.22□□□□□ -0.93
AMBRA1-210ENST00000531542 IBA57Q5T440 356 aaKnown RBP9.22□□□□□ -0.93
AMBRA1-210ENST00000531542 MZT2BQ6NZ67 158 aa9.22□□□□□ -0.93
AMBRA1-210ENST00000531542 Q6ZTI0 123 aa9.22□□□□□ -0.93
AMBRA1-210ENST00000531542 EIF4E3Q8N5X7 224 aaKnown RBP9.22□□□□□ -0.93
AMBRA1-210ENST00000531542 AAMDCQ9H7C9 122 aa9.22□□□□□ -0.93
AMBRA1-210ENST00000531542 J3KRW8 73 aa9.21□□□□□ -0.94
AMBRA1-210ENST00000531542 FAM167A-AS1Q96KT0 104 aa9.21□□□□□ -0.94
AMBRA1-210ENST00000531542 SLC25A31Q9H0C2 315 aa9.21□□□□□ -0.94
AMBRA1-210ENST00000531542 TMPRSS5Q9H3S3 457 aa9.21□□□□□ -0.94
AMBRA1-210ENST00000531542 GPN1Q9HCN4 374 aaPredicted RBP9.21□□□□□ -0.94
AMBRA1-210ENST00000531542 GSN-AS1Q9NRJ2 163 aa9.21□□□□□ -0.94
AMBRA1-210ENST00000531542 ABCA13Q86UQ4 5058 aa9.2□□□□□ -0.94
AMBRA1-210ENST00000531542 TRGV2A0A075B6R0 118 aa9.2□□□□□ -0.94
AMBRA1-210ENST00000531542 A0A0J9YY99 117 aa9.2□□□□□ -0.94
AMBRA1-210ENST00000531542 SPINK4O60575 86 aa9.2□□□□□ -0.94
AMBRA1-210ENST00000531542 NBEAP1P0C6P0 100 aa9.2□□□□□ -0.94
AMBRA1-210ENST00000531542 PYYP10082 97 aa9.2□□□□□ -0.94
AMBRA1-210ENST00000531542 TCL1AP56279 114 aa9.2□□□□□ -0.94
AMBRA1-210ENST00000531542 CD300CQ08708 224 aa9.2□□□□□ -0.94
AMBRA1-210ENST00000531542 ERCC8Q13216 396 aa9.2□□□□□ -0.94
AMBRA1-210ENST00000531542 OR5C1Q8NGR4 320 aa9.2□□□□□ -0.94
AMBRA1-210ENST00000531542 S100ZQ8WXG8 99 aa9.2□□□□□ -0.94
AMBRA1-210ENST00000531542 VSIG2Q96IQ7 327 aa9.2□□□□□ -0.94
AMBRA1-210ENST00000531542 SLC25A2Q9BXI2 301 aa9.2□□□□□ -0.94
AMBRA1-210ENST00000531542 KRTAP1-5Q9BYS1 174 aa9.2□□□□□ -0.94
AMBRA1-210ENST00000531542 NMES1Q9C002 83 aa9.2□□□□□ -0.94
AMBRA1-210ENST00000531542 KCNIP2Q9NS61 270 aa9.2□□□□□ -0.94
AMBRA1-210ENST00000531542 HSPG2P98160 4391 aa9.19□□□□□ -0.94
AMBRA1-210ENST00000531542 A0A096LPF7 62 aa9.19□□□□□ -0.94
AMBRA1-210ENST00000531542 E5RGE8 158 aa9.19□□□□□ -0.94
AMBRA1-210ENST00000531542 GPX1P07203 203 aa9.19□□□□□ -0.94
AMBRA1-210ENST00000531542 CYCSP99999 105 aaKnown RBP9.19□□□□□ -0.94
AMBRA1-210ENST00000531542 NHLH2Q02577 135 aa9.19□□□□□ -0.94
AMBRA1-210ENST00000531542 ICAM4Q14773 271 aa9.19□□□□□ -0.94
AMBRA1-210ENST00000531542 GCSAMLQ5JQS6 135 aa9.19□□□□□ -0.94
AMBRA1-210ENST00000531542 TMEM78Q5T7P6 136 aa9.19□□□□□ -0.94
AMBRA1-210ENST00000531542 EXOC3-AS1Q8N2X6 119 aa9.19□□□□□ -0.94
AMBRA1-210ENST00000531542 ZFAND2AQ8N6M9 145 aa9.19□□□□□ -0.94
AMBRA1-210ENST00000531542 ST6GAL2Q96JF0 529 aa9.19□□□□□ -0.94
AMBRA1-210ENST00000531542 MRPL32Q9BYC8 188 aaKnown RBP9.19□□□□□ -0.94
AMBRA1-210ENST00000531542 OR51M1Q9H341 326 aa9.19□□□□□ -0.94
AMBRA1-210ENST00000531542 ZNF492Q9P255 531 aa9.19□□□□□ -0.94
AMBRA1-210ENST00000531542 FUT9Q9Y231 359 aa9.19□□□□□ -0.94
AMBRA1-210ENST00000531542 RBAKDNA6NC62 111 aa9.18□□□□□ -0.94
AMBRA1-210ENST00000531542 RNASE4P34096 147 aaKnown RBP9.18□□□□□ -0.94
AMBRA1-210ENST00000531542 SLAQ13239 276 aa9.18□□□□□ -0.94
AMBRA1-210ENST00000531542 BTN1A1Q13410 526 aa9.18□□□□□ -0.94
AMBRA1-210ENST00000531542 LYPD1Q8N2G4 141 aa9.18□□□□□ -0.94
AMBRA1-210ENST00000531542 BLNKQ8WV28 456 aa9.18□□□□□ -0.94
AMBRA1-210ENST00000531542 KRTAP4-5Q9BYR2 181 aa9.18□□□□□ -0.94
AMBRA1-210ENST00000531542 WDR61Q9GZS3 305 aaKnown RBP9.18□□□□□ -0.94
AMBRA1-210ENST00000531542 LRP1BQ9NZR2 4599 aa9.18□□□□□ -0.94
AMBRA1-210ENST00000531542 IGHV1OR15-1A0A075B7D0 117 aa9.17□□□□□ -0.94
AMBRA1-210ENST00000531542 TRGV1A0A0A0MS02 117 aa9.17□□□□□ -0.94
AMBRA1-210ENST00000531542 PRAF2O60831 178 aa9.17□□□□□ -0.94
AMBRA1-210ENST00000531542 MIR17HGQ75NE6 70 aa9.17□□□□□ -0.94
AMBRA1-210ENST00000531542 THAP6Q8TBB0 222 aa9.17□□□□□ -0.94
AMBRA1-210ENST00000531542 FXYD5Q96DB9 178 aa9.17□□□□□ -0.94
AMBRA1-210ENST00000531542 VGLL1Q99990 258 aa9.17□□□□□ -0.94
AMBRA1-210ENST00000531542 KLF12Q9Y4X4 402 aa9.17□□□□□ -0.94
AMBRA1-210ENST00000531542 IGKV2-40A0A087WW87 121 aaPredicted RBP9.16□□□□□ -0.94
AMBRA1-210ENST00000531542 RGS13O14921 159 aa9.16□□□□□ -0.94
AMBRA1-210ENST00000531542 IGKV2D-40P01614 121 aaPredicted RBP9.16□□□□□ -0.94
AMBRA1-210ENST00000531542 ZNF138P52744 262 aa9.16□□□□□ -0.94
AMBRA1-210ENST00000531542 FAM122CQ6P4D5 195 aa9.16□□□□□ -0.94
AMBRA1-210ENST00000531542 SPATA12Q7Z6I5 190 aa9.16□□□□□ -0.94
AMBRA1-210ENST00000531542 PAXXQ9BUH6 204 aa9.16□□□□□ -0.94
AMBRA1-210ENST00000531542 PRO0255Q9UI72 69 aa9.16□□□□□ -0.94
AMBRA1-210ENST00000531542 TP53TG3Q9ULZ0 132 aa9.16□□□□□ -0.94
AMBRA1-210ENST00000531542 LENEPQ9Y5L5 61 aa9.16□□□□□ -0.94
AMBRA1-210ENST00000531542 C17orf112F2Z3M2 114 aa9.15□□□□□ -0.94
AMBRA1-210ENST00000531542 H0YIZ8 118 aa9.15□□□□□ -0.94
AMBRA1-210ENST00000531542 ZNF266Q14584 549 aa9.15□□□□□ -0.94
AMBRA1-210ENST00000531542 PRR9Q5T870 116 aa9.15□□□□□ -0.94
AMBRA1-210ENST00000531542 IQCF2Q8IXL9 164 aa9.15□□□□□ -0.94
AMBRA1-210ENST00000531542 ENKURQ8TC29 256 aa9.15□□□□□ -0.94
AMBRA1-210ENST00000531542 TMED6Q8WW62 240 aa9.15□□□□□ -0.94
AMBRA1-210ENST00000531542 OR5AC2Q9NZP5 309 aa9.15□□□□□ -0.94
AMBRA1-210ENST00000531542 ICOSQ9Y6W8 199 aa9.15□□□□□ -0.94
AMBRA1-210ENST00000531542 K7EP13 123 aa9.14□□□□□ -0.95
AMBRA1-210ENST00000531542 SIVA1O15304 175 aa9.14□□□□□ -0.95
AMBRA1-210ENST00000531542 PAX4O43316 350 aa9.14□□□□□ -0.95
AMBRA1-210ENST00000531542 UPK1BO75841 260 aa9.14□□□□□ -0.95
AMBRA1-210ENST00000531542 SIX6O95475 246 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms