RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 CA1P00915 261 aaPredicted RBP5.05□□□□□ -1.6
TRIM53CP-201ENST00000531490 HBE1P02100 147 aa5.05□□□□□ -1.6
TRIM53CP-201ENST00000531490 MBP02144 154 aa5.05□□□□□ -1.6
TRIM53CP-201ENST00000531490 OR5G3P0C626 314 aa5.05□□□□□ -1.6
TRIM53CP-201ENST00000531490 ATP6V0CP27449 155 aa5.05□□□□□ -1.6
TRIM53CP-201ENST00000531490 HLA-DMBP28068 263 aa5.05□□□□□ -1.6
TRIM53CP-201ENST00000531490 SELENOTP62341 195 aa5.05□□□□□ -1.6
TRIM53CP-201ENST00000531490 CLINT1Q14677 625 aa5.05□□□□□ -1.6
TRIM53CP-201ENST00000531490 FAM74A1Q5RGS3 127 aa5.05□□□□□ -1.6
TRIM53CP-201ENST00000531490 MIC13Q5XKP0 118 aa5.05□□□□□ -1.6
TRIM53CP-201ENST00000531490 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.05□□□□□ -1.6
TRIM53CP-201ENST00000531490 HSD17B11Q8NBQ5 300 aa5.05□□□□□ -1.6
TRIM53CP-201ENST00000531490 LYPD6BQ8NI32 183 aa5.05□□□□□ -1.6
TRIM53CP-201ENST00000531490 RARRES2Q99969 163 aa5.05□□□□□ -1.6
TRIM53CP-201ENST00000531490 TMEM147Q9BVK8 224 aa5.05□□□□□ -1.6
TRIM53CP-201ENST00000531490 WFDC1Q9HC57 220 aa5.05□□□□□ -1.6
TRIM53CP-201ENST00000531490 WDR83OSQ9Y284 106 aa5.05□□□□□ -1.6
TRIM53CP-201ENST00000531490 APOBP04114 4563 aaKnown RBP5.05□□□□□ -1.6
TRIM53CP-201ENST00000531490 TRAV8-2A0A0B4J237 113 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 TRAV5A0A0B4J249 113 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 H3BRN7 92 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 MRPS12O15235 138 aaKnown RBP5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 IGKV3-20P01619 116 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 NPSP0C0P6 89 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 ZNF705DP0CH99 300 aaPredicted RBP5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 ZNF705BP0CI00 300 aaPredicted RBP5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 FXYD7P58549 80 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 NANOS2P60321 138 aaKnown RBP5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 SNRPD3P62318 126 aaKnown RBP5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 PEA15Q15121 130 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 VWC2Q2TAL6 325 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 PXDC1Q5TGL8 231 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 Q6ZRG5 221 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 LINC00305Q7Z4B0 112 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 CCDC28AQ8IWP9 274 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 RNF182Q8N6D2 247 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 ZNF709Q8N972 641 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 CSNK1G2-AS1Q8NCQ2 148 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 OR11H2Q8NH07 326 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 PCNPQ8WW12 178 aaKnown RBP5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 SHANK2-AS3Q9BTD1 123 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 WDR61Q9GZS3 305 aaKnown RBP5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 SEPSECSQ9HD40 501 aaKnown RBP5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 KCNIP2Q9NS61 270 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 UQCC1Q9NVA1 299 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 HIGD1AQ9Y241 93 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 TP53TG1Q9Y2A0 90 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 DNAH5Q8TE73 4624 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 UBE2L5PA0A1B0GUS4 154 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 H3BTX0 84 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 ISLRO14498 428 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 GALR1P47211 349 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 RAB31Q13636 194 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 GCSAMLQ5JQS6 135 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 HRH4Q9H3N8 390 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 SAV1Q9H4B6 383 aaPredicted RBP5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 DNAJC4Q9NNZ3 241 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 XCL2Q9UBD3 114 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 RFNGQ9Y644 331 aa5.04□□□□□ -1.6
TRIM53CP-201ENST00000531490 MUC4Q99102 2169 aa5.03□□□□□ -1.6
TRIM53CP-201ENST00000531490 RBMY1A1P0DJD3 496 aaKnown RBP5.03□□□□□ -1.6
TRIM53CP-201ENST00000531490 RBMY1CP0DJD4 496 aa5.03□□□□□ -1.6
TRIM53CP-201ENST00000531490 HLA-DRB4P13762 266 aa5.03□□□□□ -1.6
TRIM53CP-201ENST00000531490 FGF7P21781 194 aa5.03□□□□□ -1.6
TRIM53CP-201ENST00000531490 TAGLN2P37802 199 aaKnown RBP5.03□□□□□ -1.6
TRIM53CP-201ENST00000531490 ID1P41134 155 aa5.03□□□□□ -1.6
TRIM53CP-201ENST00000531490 RPL29P47914 159 aaKnown RBP5.03□□□□□ -1.6
TRIM53CP-201ENST00000531490 PSMB3P49720 205 aa5.03□□□□□ -1.6
TRIM53CP-201ENST00000531490 RBMY1FQ15415 496 aaKnown RBP5.03□□□□□ -1.6
TRIM53CP-201ENST00000531490 FAM78BQ5VT40 261 aa5.03□□□□□ -1.6
TRIM53CP-201ENST00000531490 OR4B1Q8NGF8 309 aa5.03□□□□□ -1.6
TRIM53CP-201ENST00000531490 FAM213BQ8TBF2 198 aa5.03□□□□□ -1.6
TRIM53CP-201ENST00000531490 SLC35B3Q9H1N7 401 aa5.03□□□□□ -1.6
TRIM53CP-201ENST00000531490 TREM1Q9NP99 234 aa5.03□□□□□ -1.6
TRIM53CP-201ENST00000531490 SLC39A9Q9NUM3 307 aa5.03□□□□□ -1.6
TRIM53CP-201ENST00000531490 HLA-DRB4X5D2U9 266 aa5.03□□□□□ -1.6
TRIM53CP-201ENST00000531490 TRAV1-1A0A0B4J248 108 aa5.02□□□□□ -1.61
TRIM53CP-201ENST00000531490 A0A0J9YX75 114 aa5.02□□□□□ -1.61
TRIM53CP-201ENST00000531490 ZNF705FA8MVS1 300 aaPredicted RBP5.02□□□□□ -1.61
TRIM53CP-201ENST00000531490 H3BQ15 152 aa5.02□□□□□ -1.61
TRIM53CP-201ENST00000531490 COX7A2P2O60397 106 aa5.02□□□□□ -1.61
TRIM53CP-201ENST00000531490 IFNA1P01562 189 aa5.02□□□□□ -1.61
TRIM53CP-201ENST00000531490 PRM2P04554 102 aa5.02□□□□□ -1.61
TRIM53CP-201ENST00000531490 B2MP61769 119 aa5.02□□□□□ -1.61
TRIM53CP-201ENST00000531490 ACOT6Q3I5F7 207 aaPredicted RBP5.02□□□□□ -1.61
TRIM53CP-201ENST00000531490 TMEM41BQ5BJD5 291 aa5.02□□□□□ -1.61
TRIM53CP-201ENST00000531490 C10orf113Q5VZT2 155 aa5.02□□□□□ -1.61
TRIM53CP-201ENST00000531490 MORN3Q6PF18 240 aaPredicted RBP5.02□□□□□ -1.61
TRIM53CP-201ENST00000531490 FOXI2Q6ZQN5 318 aa5.02□□□□□ -1.61
TRIM53CP-201ENST00000531490 GPR82Q96P67 336 aa5.02□□□□□ -1.61
TRIM53CP-201ENST00000531490 SEC11CQ9BY50 192 aa5.02□□□□□ -1.61
TRIM53CP-201ENST00000531490 NPCDR1Q9BY65 106 aa5.02□□□□□ -1.61
TRIM53CP-201ENST00000531490 SH3BGRL3Q9H299 93 aa5.02□□□□□ -1.61
TRIM53CP-201ENST00000531490 RPRMQ9NS64 109 aa5.02□□□□□ -1.61
TRIM53CP-201ENST00000531490 A0A087X0K7 114 aa5.01□□□□□ -1.61
TRIM53CP-201ENST00000531490 IGHV4-28A0A0C4DH34 117 aa5.01□□□□□ -1.61
TRIM53CP-201ENST00000531490 TMEM218A2RU14 115 aa5.01□□□□□ -1.61
TRIM53CP-201ENST00000531490 PRAC2D3DTV9 90 aa5.01□□□□□ -1.61
TRIM53CP-201ENST00000531490 SLC17A3O00476 420 aa5.01□□□□□ -1.61
TRIM53CP-201ENST00000531490 NDUFS6O75380 124 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms