RNA–Protein interactions for RNA: ENST00000531385.1

PTPRU-211, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-211ENST00000531385 ZNF266Q14584 549 aa13.3□□□□□ -0.28
PTPRU-211ENST00000531385 Q8TAT8 98 aa13.3□□□□□ -0.28
PTPRU-211ENST00000531385 TNFSF18Q9UNG2 199 aa13.3□□□□□ -0.28
PTPRU-211ENST00000531385 DEFB130BP0DP73 79 aa13.29□□□□□ -0.28
PTPRU-211ENST00000531385 DEFB130AP0DP74 79 aa13.29□□□□□ -0.28
PTPRU-211ENST00000531385 TAS2R45P59539 299 aa13.29□□□□□ -0.28
PTPRU-211ENST00000531385 CD300CQ08708 224 aa13.29□□□□□ -0.28
PTPRU-211ENST00000531385 PRR9Q5T870 116 aa13.29□□□□□ -0.28
PTPRU-211ENST00000531385 RPL7L1Q6DKI1 246 aaKnown RBP13.29□□□□□ -0.28
PTPRU-211ENST00000531385 INO80EQ8NBZ0 244 aaPredicted RBP13.29□□□□□ -0.28
PTPRU-211ENST00000531385 OR10G4Q8NGN3 311 aa13.29□□□□□ -0.28
PTPRU-211ENST00000531385 OR10G9Q8NGN4 311 aa13.29□□□□□ -0.28
PTPRU-211ENST00000531385 OR10G7Q8NGN6 311 aa13.29□□□□□ -0.28
PTPRU-211ENST00000531385 RNASE8Q8TDE3 154 aaKnown RBP13.29□□□□□ -0.28
PTPRU-211ENST00000531385 ASB13Q8WXK3 278 aa13.29□□□□□ -0.28
PTPRU-211ENST00000531385 FAM19A4Q96LR4 140 aa13.29□□□□□ -0.28
PTPRU-211ENST00000531385 A0A1W2PPV4 95 aa13.28□□□□□ -0.28
PTPRU-211ENST00000531385 C7orf71A4D174 169 aa13.28□□□□□ -0.28
PTPRU-211ENST00000531385 TCTAP57738 103 aa13.28□□□□□ -0.28
PTPRU-211ENST00000531385 Q6ZQT7 251 aa13.28□□□□□ -0.28
PTPRU-211ENST00000531385 C9orf47Q6ZRZ4 202 aa13.28□□□□□ -0.28
PTPRU-211ENST00000531385 C16orf74Q96GX8 76 aa13.28□□□□□ -0.28
PTPRU-211ENST00000531385 DNAH10Q8IVF4 4471 aa13.27□□□□□ -0.28
PTPRU-211ENST00000531385 LYRM9A8MSI8 78 aa13.27□□□□□ -0.29
PTPRU-211ENST00000531385 CDC34P49427 236 aaPredicted RBP13.27□□□□□ -0.29
PTPRU-211ENST00000531385 TMEM78Q5T7P6 136 aa13.27□□□□□ -0.29
PTPRU-211ENST00000531385 OR2G3Q8NGZ4 309 aa13.27□□□□□ -0.29
PTPRU-211ENST00000531385 TMEM263Q8WUH6 116 aaKnown RBP13.27□□□□□ -0.29
PTPRU-211ENST00000531385 HYLS1Q96M11 299 aa13.27□□□□□ -0.29
PTPRU-211ENST00000531385 LINC00477Q96M19 166 aa13.27□□□□□ -0.29
PTPRU-211ENST00000531385 C20orf144Q9BQM9 153 aa13.27□□□□□ -0.29
PTPRU-211ENST00000531385 NOP10Q9NPE3 64 aaKnown RBP13.27□□□□□ -0.29
PTPRU-211ENST00000531385 RPH3ALQ9UNE2 315 aa13.27□□□□□ -0.29
PTPRU-211ENST00000531385 KLLNB2CW77 178 aa13.26□□□□□ -0.29
PTPRU-211ENST00000531385 ARL14EPLP0DKL9 152 aa13.26□□□□□ -0.29
PTPRU-211ENST00000531385 RNASE4P34096 147 aaKnown RBP13.26□□□□□ -0.29
PTPRU-211ENST00000531385 ZFAND2AQ8N6M9 145 aa13.26□□□□□ -0.29
PTPRU-211ENST00000531385 PSMG3Q9BT73 122 aaPredicted RBP13.26□□□□□ -0.29
PTPRU-211ENST00000531385 NDUFAF3Q9BU61 184 aa13.26□□□□□ -0.29
PTPRU-211ENST00000531385 SLC25A5P05141 298 aaKnown RBP13.25□□□□□ -0.29
PTPRU-211ENST00000531385 TMEM88Q6PEY1 159 aa13.25□□□□□ -0.29
PTPRU-211ENST00000531385 SSX7Q7RTT5 188 aa13.25□□□□□ -0.29
PTPRU-211ENST00000531385 ZNF492Q9P255 531 aa13.25□□□□□ -0.29
PTPRU-211ENST00000531385 TIMM8BQ9Y5J9 83 aaPredicted RBP13.25□□□□□ -0.29
PTPRU-211ENST00000531385 FRAS1Q86XX4 4008 aa13.24□□□□□ -0.29
PTPRU-211ENST00000531385 ARPC5O15511 151 aa13.24□□□□□ -0.29
PTPRU-211ENST00000531385 CRISP2P16562 243 aa13.24□□□□□ -0.29
PTPRU-211ENST00000531385 CSN1S1P47710 185 aa13.24□□□□□ -0.29
PTPRU-211ENST00000531385 PQLC2Q6ZP29 291 aa13.24□□□□□ -0.29
PTPRU-211ENST00000531385 ZNF493Q6ZR52 646 aa13.24□□□□□ -0.29
PTPRU-211ENST00000531385 LYPD1Q8N2G4 141 aa13.24□□□□□ -0.29
PTPRU-211ENST00000531385 RAB24Q969Q5 203 aa13.24□□□□□ -0.29
PTPRU-211ENST00000531385 OTORQ9NRC9 128 aa13.24□□□□□ -0.29
PTPRU-211ENST00000531385 PGPA6NDG6 321 aa13.23□□□□□ -0.29
PTPRU-211ENST00000531385 DIRC3C9JPN6 131 aa13.23□□□□□ -0.29
PTPRU-211ENST00000531385 ZNF324O75467 553 aaPredicted RBP13.23□□□□□ -0.29
PTPRU-211ENST00000531385 GPX1P07203 203 aa13.23□□□□□ -0.29
PTPRU-211ENST00000531385 ZNF138P52744 262 aa13.23□□□□□ -0.29
PTPRU-211ENST00000531385 GNG5P63218 68 aa13.23□□□□□ -0.29
PTPRU-211ENST00000531385 CCDC28AQ8IWP9 274 aa13.23□□□□□ -0.29
PTPRU-211ENST00000531385 PYGO2Q9BRQ0 406 aa13.23□□□□□ -0.29
PTPRU-211ENST00000531385 STAG3L2P0CL84 134 aa13.22□□□□□ -0.29
PTPRU-211ENST00000531385 STAG3L3P0CL85 134 aa13.22□□□□□ -0.29
PTPRU-211ENST00000531385 BORCS7-ASMTA0A0B4J1R7 106 aa13.21□□□□□ -0.29
PTPRU-211ENST00000531385 GCHFRP30047 84 aa13.21□□□□□ -0.29
PTPRU-211ENST00000531385 GOLT1AQ6ZVE7 132 aa13.21□□□□□ -0.29
PTPRU-211ENST00000531385 GSN-AS1Q9NRJ2 163 aa13.21□□□□□ -0.29
PTPRU-211ENST00000531385 TP53TG3Q9ULZ0 132 aa13.21□□□□□ -0.29
PTPRU-211ENST00000531385 GAGE12BA1L429 117 aa13.2□□□□□ -0.3
PTPRU-211ENST00000531385 SNURFLB1AK76 121 aa13.2□□□□□ -0.3
PTPRU-211ENST00000531385 F5H768 121 aa13.2□□□□□ -0.3
PTPRU-211ENST00000531385 GAGE7O76087 117 aa13.2□□□□□ -0.3
PTPRU-211ENST00000531385 GAGE12FP0CL80 117 aa13.2□□□□□ -0.3
PTPRU-211ENST00000531385 GAGE12GP0CL81 117 aa13.2□□□□□ -0.3
PTPRU-211ENST00000531385 GAGE12IP0CL82 117 aa13.2□□□□□ -0.3
PTPRU-211ENST00000531385 SERF2P84101 59 aa13.2□□□□□ -0.3
PTPRU-211ENST00000531385 ZNF726P1Q15940 193 aa13.2□□□□□ -0.3
PTPRU-211ENST00000531385 CMTM2Q8TAZ6 248 aa13.2□□□□□ -0.3
PTPRU-211ENST00000531385 CYTL1Q9NRR1 136 aa13.2□□□□□ -0.3
PTPRU-211ENST00000531385 TRAV8-1A0A0A6YYK1 113 aa13.19□□□□□ -0.3
PTPRU-211ENST00000531385 RBAKDNA6NC62 111 aa13.19□□□□□ -0.3
PTPRU-211ENST00000531385 CBY3A6NI87 242 aa13.19□□□□□ -0.3
PTPRU-211ENST00000531385 MBP02144 154 aa13.19□□□□□ -0.3
PTPRU-211ENST00000531385 ATP5G1P05496 136 aa13.19□□□□□ -0.3
PTPRU-211ENST00000531385 ATP5G3P48201 142 aa13.19□□□□□ -0.3
PTPRU-211ENST00000531385 IQCF2Q8IXL9 164 aa13.19□□□□□ -0.3
PTPRU-211ENST00000531385 C11orf72Q8NBR9 251 aa13.19□□□□□ -0.3
PTPRU-211ENST00000531385 OR11H4Q8NGC9 324 aa13.19□□□□□ -0.3
PTPRU-211ENST00000531385 RXFP4Q8TDU9 374 aa13.19□□□□□ -0.3
PTPRU-211ENST00000531385 GNPNAT1Q96EK6 184 aaPredicted RBP13.19□□□□□ -0.3
PTPRU-211ENST00000531385 ACTR3CQ9C0K3 210 aaPredicted RBP13.19□□□□□ -0.3
PTPRU-211ENST00000531385 BIRC6Q9NR09 4857 aa13.18□□□□□ -0.3
PTPRU-211ENST00000531385 NMBP08949 121 aa13.18□□□□□ -0.3
PTPRU-211ENST00000531385 MUC21Q5SSG8 566 aa13.18□□□□□ -0.3
PTPRU-211ENST00000531385 Q6ZTI0 123 aa13.18□□□□□ -0.3
PTPRU-211ENST00000531385 EIF4E3Q8N5X7 224 aaKnown RBP13.18□□□□□ -0.3
PTPRU-211ENST00000531385 LINC00612Q8N6U2 182 aa13.18□□□□□ -0.3
PTPRU-211ENST00000531385 FAM210BQ96KR6 192 aa13.18□□□□□ -0.3
PTPRU-211ENST00000531385 SGK494Q96LW2 274 aa13.18□□□□□ -0.3
PTPRU-211ENST00000531385 DNAH2Q9P225 4427 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms